RNA–Protein interactions for RNA: ENST00000427566.2

CLK3P2-201, Transcript of CDC like kinase 3 pseudogene 2, humanhuman

BASIC

Gene CLK3P2, Length 1,453 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3P2-201ENST00000427566 TRAPPC1Q9Y5R8 145 aa11.23□□□□□ -0.61
CLK3P2-201ENST00000427566 C7orf71A4D174 169 aa11.22□□□□□ -0.61
CLK3P2-201ENST00000427566 C19orf71A6NCJ1 209 aa11.22□□□□□ -0.61
CLK3P2-201ENST00000427566 ZNF324O75467 553 aaPredicted RBP11.22□□□□□ -0.61
CLK3P2-201ENST00000427566 TMEM189A5PLL7 270 aa11.21□□□□□ -0.61
CLK3P2-201ENST00000427566 IGLL5B9A064 214 aa11.21□□□□□ -0.61
CLK3P2-201ENST00000427566 MT-ND6P03923 174 aa11.21□□□□□ -0.61
CLK3P2-201ENST00000427566 COA6Q5JTJ3 125 aaKnown RBP11.21□□□□□ -0.61
CLK3P2-201ENST00000427566 PRR27Q6MZM9 219 aa11.21□□□□□ -0.61
CLK3P2-201ENST00000427566 WDR73Q6P4I2 378 aa11.21□□□□□ -0.61
CLK3P2-201ENST00000427566 RASL11AQ6T310 242 aa11.21□□□□□ -0.61
CLK3P2-201ENST00000427566 PRNTQ86SH4 94 aa11.21□□□□□ -0.61
CLK3P2-201ENST00000427566 TMEM256Q8N2U0 113 aa11.21□□□□□ -0.61
CLK3P2-201ENST00000427566 TSKUQ8WUA8 353 aa11.21□□□□□ -0.61
CLK3P2-201ENST00000427566 GNB1LQ9BYB4 327 aa11.21□□□□□ -0.61
CLK3P2-201ENST00000427566 PSG8Q9UQ74 426 aa11.21□□□□□ -0.61
CLK3P2-201ENST00000427566 TRAV10A0A0B4J240 114 aa11.2□□□□□ -0.62
CLK3P2-201ENST00000427566 PLAC8L1A1L4L8 177 aa11.2□□□□□ -0.62
CLK3P2-201ENST00000427566 SPART-AS1P0CW21 52 aa11.2□□□□□ -0.62
CLK3P2-201ENST00000427566 C12orf74Q32Q52 190 aa11.2□□□□□ -0.62
CLK3P2-201ENST00000427566 LINC00518Q8N0U6 118 aa11.2□□□□□ -0.62
CLK3P2-201ENST00000427566 DAZAP1Q96EP5 407 aaKnown RBP11.2□□□□□ -0.62
CLK3P2-201ENST00000427566 C20orf144Q9BQM9 153 aa11.2□□□□□ -0.62
CLK3P2-201ENST00000427566 RPP21Q9H633 154 aaKnown RBP11.2□□□□□ -0.62
CLK3P2-201ENST00000427566 FAM231BA6NCW3 169 aa11.19□□□□□ -0.62
CLK3P2-201ENST00000427566 A8MWL6 223 aa11.19□□□□□ -0.62
CLK3P2-201ENST00000427566 P01737 135 aa11.19□□□□□ -0.62
CLK3P2-201ENST00000427566 FAM222AQ5U5X8 452 aa11.19□□□□□ -0.62
CLK3P2-201ENST00000427566 LINC00476Q8WZB0 136 aa11.19□□□□□ -0.62
CLK3P2-201ENST00000427566 C8orf49Q96NF6 230 aa11.19□□□□□ -0.62
CLK3P2-201ENST00000427566 NAT8BQ9UHF3 227 aa11.19□□□□□ -0.62
CLK3P2-201ENST00000427566 LYSTQ99698 3801 aa11.19□□□□□ -0.62
CLK3P2-201ENST00000427566 TRBV7-9A0A0J9YWB2 115 aa11.19□□□□□ -0.62
CLK3P2-201ENST00000427566 COX8CQ7Z4L0 72 aa11.19□□□□□ -0.62
CLK3P2-201ENST00000427566 GFRA4Q9GZZ7 299 aa11.19□□□□□ -0.62
CLK3P2-201ENST00000427566 LENEPQ9Y5L5 61 aa11.19□□□□□ -0.62
CLK3P2-201ENST00000427566 DEFB131BA0A096LNP1 70 aa11.18□□□□□ -0.62
CLK3P2-201ENST00000427566 TCL1AP56279 114 aa11.18□□□□□ -0.62
CLK3P2-201ENST00000427566 ATP5L2Q7Z4Y8 100 aa11.18□□□□□ -0.62
CLK3P2-201ENST00000427566 HIST3H2BBQ8N257 126 aa11.18□□□□□ -0.62
CLK3P2-201ENST00000427566 RNASE8Q8TDE3 154 aaKnown RBP11.18□□□□□ -0.62
CLK3P2-201ENST00000427566 DKK2Q9UBU2 259 aa11.18□□□□□ -0.62
CLK3P2-201ENST00000427566 DYNC2H1Q8NCM8 4307 aaKnown RBP11.17□□□□□ -0.62
CLK3P2-201ENST00000427566 XKRY2A2RUG3 117 aa11.17□□□□□ -0.62
CLK3P2-201ENST00000427566 SNURFLB1AK76 121 aa11.17□□□□□ -0.62
CLK3P2-201ENST00000427566 HLA-DQA1P01909 254 aa11.17□□□□□ -0.62
CLK3P2-201ENST00000427566 SAPCD1Q5SSQ6 148 aa11.17□□□□□ -0.62
CLK3P2-201ENST00000427566 NUP35Q8NFH5 326 aa11.17□□□□□ -0.62
CLK3P2-201ENST00000427566 MRPL18Q9H0U6 180 aaKnown RBP11.17□□□□□ -0.62
CLK3P2-201ENST00000427566 TP53TG3Q9ULZ0 132 aa11.17□□□□□ -0.62
CLK3P2-201ENST00000427566 RYR3Q15413 4870 aa11.16□□□□□ -0.62
CLK3P2-201ENST00000427566 TEX48A0A1B0GUV7 120 aa11.16□□□□□ -0.62
CLK3P2-201ENST00000427566 SMIM6P0DI80 62 aa11.16□□□□□ -0.62
CLK3P2-201ENST00000427566 HTN3P15516 51 aa11.16□□□□□ -0.62
CLK3P2-201ENST00000427566 S100A2P29034 98 aa11.16□□□□□ -0.62
CLK3P2-201ENST00000427566 ZNF80P51504 273 aaPredicted RBP11.16□□□□□ -0.62
CLK3P2-201ENST00000427566 MUC21Q5SSG8 566 aa11.16□□□□□ -0.62
CLK3P2-201ENST00000427566 Q6AWC8 147 aa11.16□□□□□ -0.62
CLK3P2-201ENST00000427566 TMEM136Q6ZRR5 245 aa11.16□□□□□ -0.62
CLK3P2-201ENST00000427566 C16orf74Q96GX8 76 aa11.16□□□□□ -0.62
CLK3P2-201ENST00000427566 ZC2HC1AQ96GY0 325 aa11.16□□□□□ -0.62
CLK3P2-201ENST00000427566 HIGD1CA8MV81 97 aa11.15□□□□□ -0.62
CLK3P2-201ENST00000427566 DAD1P61803 113 aa11.15□□□□□ -0.62
CLK3P2-201ENST00000427566 TMEM263Q8WUH6 116 aaKnown RBP11.15□□□□□ -0.62
CLK3P2-201ENST00000427566 IGHV4-4A0A075B6R2 117 aa11.14□□□□□ -0.63
CLK3P2-201ENST00000427566 MRPL54Q6P161 138 aaKnown RBP11.14□□□□□ -0.63
CLK3P2-201ENST00000427566 NOP10Q9NPE3 64 aaKnown RBP11.14□□□□□ -0.63
CLK3P2-201ENST00000427566 IGHV1OR15-1A0A075B7D0 117 aa11.13□□□□□ -0.63
CLK3P2-201ENST00000427566 CBY3A6NI87 242 aa11.13□□□□□ -0.63
CLK3P2-201ENST00000427566 IFITM10A6NMD0 228 aa11.13□□□□□ -0.63
CLK3P2-201ENST00000427566 SPINK4O60575 86 aa11.13□□□□□ -0.63
CLK3P2-201ENST00000427566 FOXA3P55318 350 aaPredicted RBP11.13□□□□□ -0.63
CLK3P2-201ENST00000427566 ZNF493Q6ZR52 646 aa11.13□□□□□ -0.63
CLK3P2-201ENST00000427566 C11orf72Q8NBR9 251 aa11.13□□□□□ -0.63
CLK3P2-201ENST00000427566 OR2D3Q8NGH3 330 aa11.13□□□□□ -0.63
CLK3P2-201ENST00000427566 LINC00467Q9BRT7 94 aa11.13□□□□□ -0.63
CLK3P2-201ENST00000427566 NDFIP1Q9BT67 221 aa11.13□□□□□ -0.63
CLK3P2-201ENST00000427566 GSN-AS1Q9NRJ2 163 aa11.13□□□□□ -0.63
CLK3P2-201ENST00000427566 APLNQ9ULZ1 77 aa11.13□□□□□ -0.63
CLK3P2-201ENST00000427566 A0A1B0GXF2 115 aa11.12□□□□□ -0.63
CLK3P2-201ENST00000427566 DEFB130BP0DP73 79 aa11.12□□□□□ -0.63
CLK3P2-201ENST00000427566 DEFB130AP0DP74 79 aa11.12□□□□□ -0.63
CLK3P2-201ENST00000427566 TCTAP57738 103 aa11.12□□□□□ -0.63
CLK3P2-201ENST00000427566 C12orf57Q99622 126 aa11.12□□□□□ -0.63
CLK3P2-201ENST00000427566 C11orf21Q9P2W6 132 aa11.12□□□□□ -0.63
CLK3P2-201ENST00000427566 TIMM8BQ9Y5J9 83 aaPredicted RBP11.12□□□□□ -0.63
CLK3P2-201ENST00000427566 ANXA2RQ3ZCQ2 193 aa11.12□□□□□ -0.63
CLK3P2-201ENST00000427566 NAGKQ9UJ70 344 aa11.12□□□□□ -0.63
CLK3P2-201ENST00000427566 PLECQ15149 4684 aaKnown RBP11.11□□□□□ -0.63
CLK3P2-201ENST00000427566 LYRM9A8MSI8 78 aa11.11□□□□□ -0.63
CLK3P2-201ENST00000427566 CRIP1P50238 77 aa11.11□□□□□ -0.63
CLK3P2-201ENST00000427566 RAB4BP61018 213 aa11.11□□□□□ -0.63
CLK3P2-201ENST00000427566 Q0VG73 95 aa11.11□□□□□ -0.63
CLK3P2-201ENST00000427566 LGALS9CQ6DKI2 356 aa11.11□□□□□ -0.63
CLK3P2-201ENST00000427566 GTSF1Q8WW33 167 aa11.11□□□□□ -0.63
CLK3P2-201ENST00000427566 MDFICQ9P1T7 246 aa11.11□□□□□ -0.63
CLK3P2-201ENST00000427566 ALMS1Q8TCU4 4167 aa11.11□□□□□ -0.63
CLK3P2-201ENST00000427566 TRAV21A0A0B4J279 112 aa11.1□□□□□ -0.63
CLK3P2-201ENST00000427566 GNRH2O43555 120 aa11.1□□□□□ -0.63
CLK3P2-201ENST00000427566 APCSP02743 223 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms