RNA–Protein interactions for RNA: ENST00000427506.5

GPC1-205, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-205ENST00000427506 FMC1Q96HJ9 113 aa12.57□□□□□ -0.4
GPC1-205ENST00000427506 ZFP30Q9Y2G7 519 aa12.57□□□□□ -0.4
GPC1-205ENST00000427506 B4DEV8 164 aa12.56□□□□□ -0.4
GPC1-205ENST00000427506 BCL2L11O43521 198 aa12.56□□□□□ -0.4
GPC1-205ENST00000427506 EVI2AP22794 236 aa12.56□□□□□ -0.4
GPC1-205ENST00000427506 RHOHQ15669 191 aa12.56□□□□□ -0.4
GPC1-205ENST00000427506 SLC25A29Q8N8R3 303 aa12.56□□□□□ -0.4
GPC1-205ENST00000427506 HERC2O95714 4834 aa12.55□□□□□ -0.4
GPC1-205ENST00000427506 PKHD1P08F94 4074 aa12.55□□□□□ -0.4
GPC1-205ENST00000427506 A0A1B0GV50 99 aa12.55□□□□□ -0.4
GPC1-205ENST00000427506 TRBV6-4A0A1B0GX49 114 aa12.55□□□□□ -0.4
GPC1-205ENST00000427506 UMAD1C9J7I0 102 aa12.55□□□□□ -0.4
GPC1-205ENST00000427506 LGALSLQ3ZCW2 172 aaPredicted RBP12.55□□□□□ -0.4
GPC1-205ENST00000427506 ZC2HC1AQ96GY0 325 aa12.55□□□□□ -0.4
GPC1-205ENST00000427506 TCEAL7Q9BRU2 100 aa12.55□□□□□ -0.4
GPC1-205ENST00000427506 TNFRSF18Q9Y5U5 241 aa12.55□□□□□ -0.4
GPC1-205ENST00000427506 M0R036 132 aa12.54□□□□□ -0.4
GPC1-205ENST00000427506 PAGE4O60829 102 aa12.54□□□□□ -0.4
GPC1-205ENST00000427506 PFDN1O60925 122 aa12.54□□□□□ -0.4
GPC1-205ENST00000427506 AKR1C3P42330 323 aa12.54□□□□□ -0.4
GPC1-205ENST00000427506 EIF5AP63241 154 aaKnown RBP12.54□□□□□ -0.4
GPC1-205ENST00000427506 NFE4Q86UQ8 179 aa12.54□□□□□ -0.4
GPC1-205ENST00000427506 A8MWV9 139 aa12.53□□□□□ -0.4
GPC1-205ENST00000427506 K7EP13 123 aa12.53□□□□□ -0.4
GPC1-205ENST00000427506 SH2D1AO60880 128 aa12.53□□□□□ -0.4
GPC1-205ENST00000427506 MGST1P10620 155 aaKnown RBP12.53□□□□□ -0.4
GPC1-205ENST00000427506 CRIP1P50238 77 aa12.53□□□□□ -0.4
GPC1-205ENST00000427506 FAM162BQ5T6X4 162 aa12.53□□□□□ -0.4
GPC1-205ENST00000427506 Q6ZRN7 208 aaPredicted RBP12.53□□□□□ -0.4
GPC1-205ENST00000427506 MBD3L1Q8WWY6 194 aa12.53□□□□□ -0.4
GPC1-205ENST00000427506 KIAA1109Q2LD37 5005 aa12.53□□□□□ -0.4
GPC1-205ENST00000427506 GRIFINA4D1Z8 144 aa12.52□□□□□ -0.41
GPC1-205ENST00000427506 KRBOX1C9JBD0 128 aa12.52□□□□□ -0.41
GPC1-205ENST00000427506 H3BVH4 76 aa12.52□□□□□ -0.41
GPC1-205ENST00000427506 EREGO14944 169 aa12.52□□□□□ -0.41
GPC1-205ENST00000427506 DNAH10OSP0CZ25 163 aa12.52□□□□□ -0.41
GPC1-205ENST00000427506 IL36BQ9NZH7 164 aa12.52□□□□□ -0.41
GPC1-205ENST00000427506 TRAV8-6A0A0B4J262 113 aa12.51□□□□□ -0.41
GPC1-205ENST00000427506 TRBV6-1A0A0K0K1D8 114 aa12.51□□□□□ -0.41
GPC1-205ENST00000427506 CRYGDP07320 174 aa12.51□□□□□ -0.41
GPC1-205ENST00000427506 H2AFB1P0C5Y9 115 aa12.51□□□□□ -0.41
GPC1-205ENST00000427506 TPT1P13693 172 aaKnown RBP12.51□□□□□ -0.41
GPC1-205ENST00000427506 TIRAPP58753 221 aa12.51□□□□□ -0.41
GPC1-205ENST00000427506 ERVFC1-1P60608 527 aa12.51□□□□□ -0.41
GPC1-205ENST00000427506 TMUB2Q71RG4 321 aa12.51□□□□□ -0.41
GPC1-205ENST00000427506 COX8CQ7Z4L0 72 aa12.51□□□□□ -0.41
GPC1-205ENST00000427506 SYT8Q8NBV8 401 aa12.51□□□□□ -0.41
GPC1-205ENST00000427506 PARLQ9H300 379 aa12.51□□□□□ -0.41
GPC1-205ENST00000427506 MSRB1Q9NZV6 116 aa12.51□□□□□ -0.41
GPC1-205ENST00000427506 TMSB15BA0A087X1C1 80 aa12.5□□□□□ -0.41
GPC1-205ENST00000427506 LTAP01374 205 aa12.5□□□□□ -0.41
GPC1-205ENST00000427506 ARMS2P0C7Q2 107 aa12.5□□□□□ -0.41
GPC1-205ENST00000427506 KRTAP10-2P60368 255 aa12.5□□□□□ -0.41
GPC1-205ENST00000427506 OR10J3Q5JRS4 329 aa12.5□□□□□ -0.41
GPC1-205ENST00000427506 PIK3CD-AS1Q5SR53 167 aa12.5□□□□□ -0.41
GPC1-205ENST00000427506 ZFP2Q6ZN57 461 aa12.5□□□□□ -0.41
GPC1-205ENST00000427506 C10orf126Q8N4M7 172 aa12.5□□□□□ -0.41
GPC1-205ENST00000427506 KRTAP17-1Q9BYP8 105 aa12.5□□□□□ -0.41
GPC1-205ENST00000427506 IGHV3-38A0A0C4DH36 116 aa12.49□□□□□ -0.41
GPC1-205ENST00000427506 ZNF674Q2M3X9 581 aa12.49□□□□□ -0.41
GPC1-205ENST00000427506 DMRTA1Q5VZB9 504 aa12.49□□□□□ -0.41
GPC1-205ENST00000427506 ATP6V0E2Q8NHE4 81 aa12.49□□□□□ -0.41
GPC1-205ENST00000427506 JPT2Q9H910 190 aa12.49□□□□□ -0.41
GPC1-205ENST00000427506 PHLDA3Q9Y5J5 127 aa12.49□□□□□ -0.41
GPC1-205ENST00000427506 DNAH11Q96DT5 4516 aa12.48□□□□□ -0.41
GPC1-205ENST00000427506 S100A9P06702 114 aaKnown RBP12.48□□□□□ -0.41
GPC1-205ENST00000427506 DNLZQ5SXM8 178 aa12.48□□□□□ -0.41
GPC1-205ENST00000427506 Q6ZSN1 163 aa12.48□□□□□ -0.41
GPC1-205ENST00000427506 SCO2A0A1W2PP80 73 aa12.47□□□□□ -0.41
GPC1-205ENST00000427506 GAGE12JA6NER3 117 aa12.47□□□□□ -0.41
GPC1-205ENST00000427506 CDK2AP2O75956 126 aa12.47□□□□□ -0.41
GPC1-205ENST00000427506 GAGE1Q13065 139 aa12.47□□□□□ -0.41
GPC1-205ENST00000427506 GAGE4Q13068 117 aa12.47□□□□□ -0.41
GPC1-205ENST00000427506 GAGE5Q13069 117 aa12.47□□□□□ -0.41
GPC1-205ENST00000427506 LINC01559Q495D7 138 aa12.47□□□□□ -0.41
GPC1-205ENST00000427506 GAGE13Q4V321 117 aa12.47□□□□□ -0.41
GPC1-205ENST00000427506 LELP1Q5T871 98 aa12.47□□□□□ -0.41
GPC1-205ENST00000427506 SAMD10Q9BYL1 202 aa12.47□□□□□ -0.41
GPC1-205ENST00000427506 GTSF1LQ9H1H1 148 aa12.47□□□□□ -0.41
GPC1-205ENST00000427506 BOLA1Q9Y3E2 137 aa12.47□□□□□ -0.41
GPC1-205ENST00000427506 M0R381 172 aa12.46□□□□□ -0.41
GPC1-205ENST00000427506 FAM74A4Q5TZK3 123 aa12.46□□□□□ -0.41
GPC1-205ENST00000427506 RHODO00212 210 aa12.45□□□□□ -0.42
GPC1-205ENST00000427506 LINC01556Q5JQF7 62 aa12.45□□□□□ -0.42
GPC1-205ENST00000427506 EIF5AL1Q6IS14 154 aaKnown RBP12.45□□□□□ -0.42
GPC1-205ENST00000427506 BAGE2Q86Y30 109 aa12.45□□□□□ -0.42
GPC1-205ENST00000427506 PGPEP1Q9NXJ5 209 aa12.45□□□□□ -0.42
GPC1-205ENST00000427506 DYNC1H1Q14204 4646 aaKnown RBP12.45□□□□□ -0.42
GPC1-205ENST00000427506 IGHV3-30P01768 117 aa12.44□□□□□ -0.42
GPC1-205ENST00000427506 IGHV3-33P01772 117 aa12.44□□□□□ -0.42
GPC1-205ENST00000427506 IGHV3-30-3P0DP02 117 aa12.44□□□□□ -0.42
GPC1-205ENST00000427506 IGHV3-30-5P0DP03 117 aa12.44□□□□□ -0.42
GPC1-205ENST00000427506 UFSP1Q6NVU6 142 aa12.44□□□□□ -0.42
GPC1-205ENST00000427506 ZFP82Q8N141 532 aa12.44□□□□□ -0.42
GPC1-205ENST00000427506 C14orf178Q8N769 122 aaPredicted RBP12.44□□□□□ -0.42
GPC1-205ENST00000427506 GNG13Q9P2W3 67 aa12.44□□□□□ -0.42
GPC1-205ENST00000427506 A0A087WTM6 91 aa12.43□□□□□ -0.42
GPC1-205ENST00000427506 A0A087WWL8 130 aa12.43□□□□□ -0.42
GPC1-205ENST00000427506 PSCAO43653 123 aa12.43□□□□□ -0.42
GPC1-205ENST00000427506 SFRP2Q96HF1 295 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms