RNA–Protein interactions for RNA: ENST00000426155.6

SNX3-204, Transcript of sorting nexin 3, humanhuman

TSL 1 (best) BASIC

Gene SNX3, Length 1,072 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-204ENST00000426155 RPS10P5Q9NQ39 176 aa9.49□□□□□ -0.89
SNX3-204ENST00000426155 TRGV11A0A075B6L2 103 aa9.48□□□□□ -0.89
SNX3-204ENST00000426155 IGHV3-16A0A0C4DH30 117 aa9.48□□□□□ -0.89
SNX3-204ENST00000426155 K7EQM0 130 aa9.48□□□□□ -0.89
SNX3-204ENST00000426155 TDRG1Q3Y452 100 aa9.48□□□□□ -0.89
SNX3-204ENST00000426155 Q86TA4 180 aa9.48□□□□□ -0.89
SNX3-204ENST00000426155 VSIG2Q96IQ7 327 aa9.48□□□□□ -0.89
SNX3-204ENST00000426155 C18orf15Q96N68 181 aa9.48□□□□□ -0.89
SNX3-204ENST00000426155 LINC00588Q9Y4M8 146 aa9.48□□□□□ -0.89
SNX3-204ENST00000426155 ARL2-SNX15V9GYD0 113 aa9.48□□□□□ -0.89
SNX3-204ENST00000426155 C5orf52A6NGY3 159 aa9.47□□□□□ -0.89
SNX3-204ENST00000426155 SRSF3P84103 164 aaKnown RBP9.47□□□□□ -0.89
SNX3-204ENST00000426155 UMAD1C9J7I0 102 aa9.46□□□□□ -0.9
SNX3-204ENST00000426155 M0R036 132 aa9.46□□□□□ -0.9
SNX3-204ENST00000426155 SNRPEP62304 92 aaKnown RBP9.46□□□□□ -0.9
SNX3-204ENST00000426155 LGALS9BQ3B8N2 356 aa9.46□□□□□ -0.9
SNX3-204ENST00000426155 HIST1H2BAQ96A08 127 aa9.46□□□□□ -0.9
SNX3-204ENST00000426155 ZNF479Q96JC4 524 aa9.46□□□□□ -0.9
SNX3-204ENST00000426155 EIF5A2Q9GZV4 153 aaKnown RBP9.46□□□□□ -0.9
SNX3-204ENST00000426155 SDF2L1Q9HCN8 221 aa9.46□□□□□ -0.9
SNX3-204ENST00000426155 PKD1P98161 4303 aa9.46□□□□□ -0.9
SNX3-204ENST00000426155 A0A096LPF7 62 aa9.45□□□□□ -0.9
SNX3-204ENST00000426155 C7orf77A4D0Y5 90 aa9.45□□□□□ -0.9
SNX3-204ENST00000426155 PAGE4O60829 102 aa9.45□□□□□ -0.9
SNX3-204ENST00000426155 PFN1P07737 140 aaKnown RBP9.45□□□□□ -0.9
SNX3-204ENST00000426155 PPT1P50897 306 aa9.45□□□□□ -0.9
SNX3-204ENST00000426155 CST9LP1Q5W188 147 aa9.45□□□□□ -0.9
SNX3-204ENST00000426155 ZNRF2Q8NHG8 242 aa9.45□□□□□ -0.9
SNX3-204ENST00000426155 MBD3L1Q8WWY6 194 aa9.45□□□□□ -0.9
SNX3-204ENST00000426155 GATCO43716 136 aaKnown RBP9.44□□□□□ -0.9
SNX3-204ENST00000426155 RAB5AP20339 215 aa9.44□□□□□ -0.9
SNX3-204ENST00000426155 CCL18P55774 89 aa9.44□□□□□ -0.9
SNX3-204ENST00000426155 FHL2Q14192 279 aa9.44□□□□□ -0.9
SNX3-204ENST00000426155 Q6ZR54 194 aa9.44□□□□□ -0.9
SNX3-204ENST00000426155 ZFP82Q8N141 532 aa9.44□□□□□ -0.9
SNX3-204ENST00000426155 RASL10AQ92737 203 aa9.44□□□□□ -0.9
SNX3-204ENST00000426155 KCNS1Q96KK3 526 aa9.44□□□□□ -0.9
SNX3-204ENST00000426155 SPXQ9BT56 116 aa9.44□□□□□ -0.9
SNX3-204ENST00000426155 FBLL1A6NHQ2 334 aaKnown RBP9.43□□□□□ -0.9
SNX3-204ENST00000426155 H3BNG1 76 aa9.43□□□□□ -0.9
SNX3-204ENST00000426155 RTL8CO15255 209 aa9.43□□□□□ -0.9
SNX3-204ENST00000426155 ESRGQ1W209 222 aa9.43□□□□□ -0.9
SNX3-204ENST00000426155 SAPCD1Q5SSQ6 148 aa9.43□□□□□ -0.9
SNX3-204ENST00000426155 DPPA3Q6W0C5 159 aa9.43□□□□□ -0.9
SNX3-204ENST00000426155 ZC2HC1AQ96GY0 325 aa9.43□□□□□ -0.9
SNX3-204ENST00000426155 IGKV3D-20A0A0C4DH25 116 aa9.42□□□□□ -0.9
SNX3-204ENST00000426155 SCO2A0A1W2PP80 73 aa9.42□□□□□ -0.9
SNX3-204ENST00000426155 C9JCJ5 164 aa9.42□□□□□ -0.9
SNX3-204ENST00000426155 M0R2P5 195 aa9.42□□□□□ -0.9
SNX3-204ENST00000426155 PAX4O43316 350 aa9.42□□□□□ -0.9
SNX3-204ENST00000426155 CRIP1P50238 77 aa9.42□□□□□ -0.9
SNX3-204ENST00000426155 CRYBA4P53673 196 aa9.42□□□□□ -0.9
SNX3-204ENST00000426155 UBE2G1P62253 170 aa9.42□□□□□ -0.9
SNX3-204ENST00000426155 CCL20P78556 96 aa9.42□□□□□ -0.9
SNX3-204ENST00000426155 SOHLH1Q5JUK2 328 aa9.42□□□□□ -0.9
SNX3-204ENST00000426155 NHLRC2Q8NBF2 726 aa9.42□□□□□ -0.9
SNX3-204ENST00000426155 NIT2Q9NQR4 276 aa9.42□□□□□ -0.9
SNX3-204ENST00000426155 A0A087WWC5 75 aa9.41□□□□□ -0.9
SNX3-204ENST00000426155 TRGV4A0A0C4DH28 118 aa9.41□□□□□ -0.9
SNX3-204ENST00000426155 RNASE3P12724 160 aaKnown RBP9.41□□□□□ -0.9
SNX3-204ENST00000426155 S100A2P29034 98 aa9.41□□□□□ -0.9
SNX3-204ENST00000426155 AKR1C3P42330 323 aa9.41□□□□□ -0.9
SNX3-204ENST00000426155 FAM3BP58499 235 aaPredicted RBP9.41□□□□□ -0.9
SNX3-204ENST00000426155 FABP9Q0Z7S8 132 aa9.41□□□□□ -0.9
SNX3-204ENST00000426155 FMC1Q96HJ9 113 aa9.41□□□□□ -0.9
SNX3-204ENST00000426155 C9orf85Q96MD7 179 aa9.41□□□□□ -0.9
SNX3-204ENST00000426155 PRO0255Q9UI72 69 aa9.41□□□□□ -0.9
SNX3-204ENST00000426155 HHLA3Q9XRX5 114 aa9.41□□□□□ -0.9
SNX3-204ENST00000426155 PKHD1P08F94 4074 aa9.41□□□□□ -0.9
SNX3-204ENST00000426155 TRAV4A0A0B4J268 109 aa9.4□□□□□ -0.9
SNX3-204ENST00000426155 B4DEV8 164 aa9.4□□□□□ -0.9
SNX3-204ENST00000426155 ZNF876PQ49A33 203 aa9.4□□□□□ -0.9
SNX3-204ENST00000426155 OR4C5Q8NGB2 326 aa9.4□□□□□ -0.9
SNX3-204ENST00000426155 KRTAP1-5Q9BYS1 174 aa9.4□□□□□ -0.9
SNX3-204ENST00000426155 ICOSQ9Y6W8 199 aa9.4□□□□□ -0.9
SNX3-204ENST00000426155 DNAH11Q96DT5 4516 aa9.4□□□□□ -0.9
SNX3-204ENST00000426155 LOC100131303A0A0U1RQF7 123 aa9.39□□□□□ -0.91
SNX3-204ENST00000426155 NBDYA0A0U1RRE5 68 aa9.39□□□□□ -0.91
SNX3-204ENST00000426155 RBFOX3A6NFN3 312 aa9.39□□□□□ -0.91
SNX3-204ENST00000426155 PGPEP1LA6NFU8 196 aa9.39□□□□□ -0.91
SNX3-204ENST00000426155 FABP5P3A8MUU1 101 aa9.39□□□□□ -0.91
SNX3-204ENST00000426155 SH2D1AO60880 128 aa9.39□□□□□ -0.91
SNX3-204ENST00000426155 LTAP01374 205 aa9.39□□□□□ -0.91
SNX3-204ENST00000426155 ZNF506Q5JVG8 444 aa9.39□□□□□ -0.91
SNX3-204ENST00000426155 DNLZQ5SXM8 178 aa9.39□□□□□ -0.91
SNX3-204ENST00000426155 GNG13Q9P2W3 67 aa9.39□□□□□ -0.91
SNX3-204ENST00000426155 MRPS16Q9Y3D3 137 aaKnown RBP9.39□□□□□ -0.91
SNX3-204ENST00000426155 DYNC1H1Q14204 4646 aaKnown RBP9.39□□□□□ -0.91
SNX3-204ENST00000426155 TMSB15BA0A087X1C1 80 aa9.38□□□□□ -0.91
SNX3-204ENST00000426155 IGHV3-73A0A0B4J1V6 119 aa9.38□□□□□ -0.91
SNX3-204ENST00000426155 GRIFINA4D1Z8 144 aa9.38□□□□□ -0.91
SNX3-204ENST00000426155 C9JQL5 133 aa9.38□□□□□ -0.91
SNX3-204ENST00000426155 ORM1P02763 201 aa9.38□□□□□ -0.91
SNX3-204ENST00000426155 Q9H8V8 135 aa9.38□□□□□ -0.91
SNX3-204ENST00000426155 ZFP30Q9Y2G7 519 aa9.38□□□□□ -0.91
SNX3-204ENST00000426155 TRBV6-1A0A0K0K1D8 114 aa9.37□□□□□ -0.91
SNX3-204ENST00000426155 PRSS29PA6NIE9 313 aa9.37□□□□□ -0.91
SNX3-204ENST00000426155 H3BVH4 76 aa9.37□□□□□ -0.91
SNX3-204ENST00000426155 K7EQD1 137 aa9.37□□□□□ -0.91
SNX3-204ENST00000426155 GYPEP15421 78 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms