RNA–Protein interactions for RNA: ENST00000423575.5

LINC00539-202, long intergenic non-protein coding RNA 539, humanhuman

TSL 3 BASIC

Gene LINC00539, Length 699 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00539-202ENST00000423575 MED14OSP0DP75 135 aa8.57□□□□□ -1.04
LINC00539-202ENST00000423575 RASL10AQ92737 203 aa8.57□□□□□ -1.04
LINC00539-202ENST00000423575 OSTCQ9NRP0 149 aa8.57□□□□□ -1.04
LINC00539-202ENST00000423575 TRGV2A0A075B6R0 118 aa8.56□□□□□ -1.04
LINC00539-202ENST00000423575 SNAI2O43623 268 aa8.56□□□□□ -1.04
LINC00539-202ENST00000423575 IGLC6P0CF74 106 aa8.56□□□□□ -1.04
LINC00539-202ENST00000423575 ZNF876PQ49A33 203 aa8.56□□□□□ -1.04
LINC00539-202ENST00000423575 ZFAND6Q6FIF0 208 aa8.56□□□□□ -1.04
LINC00539-202ENST00000423575 FER1L6-AS1Q8NA97 138 aa8.56□□□□□ -1.04
LINC00539-202ENST00000423575 OR10AG1Q8NH19 301 aa8.56□□□□□ -1.04
LINC00539-202ENST00000423575 PHLDA1Q8WV24 401 aaPredicted RBP8.56□□□□□ -1.04
LINC00539-202ENST00000423575 SFRP2Q96HF1 295 aa8.56□□□□□ -1.04
LINC00539-202ENST00000423575 C18orf15Q96N68 181 aa8.56□□□□□ -1.04
LINC00539-202ENST00000423575 DYNC2H1Q8NCM8 4307 aaKnown RBP8.56□□□□□ -1.04
LINC00539-202ENST00000423575 TRAV10A0A0B4J240 114 aa8.55□□□□□ -1.04
LINC00539-202ENST00000423575 XKRY2A2RUG3 117 aa8.55□□□□□ -1.04
LINC00539-202ENST00000423575 F8W036 122 aa8.55□□□□□ -1.04
LINC00539-202ENST00000423575 OR5AL1P0C617 328 aa8.55□□□□□ -1.04
LINC00539-202ENST00000423575 HTN3P15516 51 aa8.55□□□□□ -1.04
LINC00539-202ENST00000423575 PLECQ15149 4684 aaKnown RBP8.55□□□□□ -1.04
LINC00539-202ENST00000423575 CT83Q5H943 113 aa8.55□□□□□ -1.04
LINC00539-202ENST00000423575 C15orf54Q8N8G6 183 aa8.55□□□□□ -1.04
LINC00539-202ENST00000423575 PTH2Q96A98 100 aa8.55□□□□□ -1.04
LINC00539-202ENST00000423575 SSBP4Q9BWG4 385 aaPredicted RBP8.55□□□□□ -1.04
LINC00539-202ENST00000423575 V9GYV3 84 aa8.55□□□□□ -1.04
LINC00539-202ENST00000423575 MUC4Q99102 2169 aa8.54□□□□□ -1.04
LINC00539-202ENST00000423575 DEFB131BA0A096LNP1 70 aa8.54□□□□□ -1.04
LINC00539-202ENST00000423575 MUC21A0A0G2JKD1 596 aa8.54□□□□□ -1.04
LINC00539-202ENST00000423575 MUC21A0A140T8X8 626 aa8.54□□□□□ -1.04
LINC00539-202ENST00000423575 M0R381 172 aa8.54□□□□□ -1.04
LINC00539-202ENST00000423575 NXPH4O95158 308 aa8.54□□□□□ -1.04
LINC00539-202ENST00000423575 IGHV3-53P01767 116 aa8.54□□□□□ -1.04
LINC00539-202ENST00000423575 ATP5G1P05496 136 aa8.54□□□□□ -1.04
LINC00539-202ENST00000423575 PNRC1Q12796 327 aaPredicted RBP8.54□□□□□ -1.04
LINC00539-202ENST00000423575 DMRTA1Q5VZB9 504 aa8.54□□□□□ -1.04
LINC00539-202ENST00000423575 POM121L12Q8N7R1 296 aa8.54□□□□□ -1.04
LINC00539-202ENST00000423575 OR10G8Q8NGN5 311 aa8.54□□□□□ -1.04
LINC00539-202ENST00000423575 GTSF1Q8WW33 167 aa8.54□□□□□ -1.04
LINC00539-202ENST00000423575 TPPP3Q9BW30 176 aa8.54□□□□□ -1.04
LINC00539-202ENST00000423575 SEC11CQ9BY50 192 aa8.54□□□□□ -1.04
LINC00539-202ENST00000423575 PHLDA3Q9Y5J5 127 aa8.54□□□□□ -1.04
LINC00539-202ENST00000423575 A8MWL6 223 aa8.53□□□□□ -1.04
LINC00539-202ENST00000423575 HOXA5P20719 270 aa8.53□□□□□ -1.04
LINC00539-202ENST00000423575 CTRLP40313 264 aa8.53□□□□□ -1.04
LINC00539-202ENST00000423575 PIK3CD-AS1Q5SR53 167 aa8.53□□□□□ -1.04
LINC00539-202ENST00000423575 CEMP1Q6PRD7 247 aaPredicted RBP8.53□□□□□ -1.04
LINC00539-202ENST00000423575 ZFP82Q8N141 532 aa8.53□□□□□ -1.04
LINC00539-202ENST00000423575 TSKUQ8WUA8 353 aa8.53□□□□□ -1.04
LINC00539-202ENST00000423575 NDUFAF3Q9BU61 184 aa8.53□□□□□ -1.04
LINC00539-202ENST00000423575 JPT2Q9H910 190 aa8.53□□□□□ -1.04
LINC00539-202ENST00000423575 TRAV4A0A0B4J268 109 aa8.52□□□□□ -1.05
LINC00539-202ENST00000423575 A0A1W2PPQ1 181 aa8.52□□□□□ -1.05
LINC00539-202ENST00000423575 NUPR2A6NF83 97 aa8.52□□□□□ -1.05
LINC00539-202ENST00000423575 RS1O15537 224 aa8.52□□□□□ -1.05
LINC00539-202ENST00000423575 C10orf91Q5T1B1 145 aa8.52□□□□□ -1.05
LINC00539-202ENST00000423575 CFAP126Q5VTH2 177 aa8.52□□□□□ -1.05
LINC00539-202ENST00000423575 LYZL1Q6UWQ5 148 aa8.52□□□□□ -1.05
LINC00539-202ENST00000423575 SLC7A5P1Q8MH63 180 aa8.52□□□□□ -1.05
LINC00539-202ENST00000423575 SYT8Q8NBV8 401 aa8.52□□□□□ -1.05
LINC00539-202ENST00000423575 ZNF479Q96JC4 524 aa8.52□□□□□ -1.05
LINC00539-202ENST00000423575 CARHSP1Q9Y2V2 147 aaKnown RBP8.52□□□□□ -1.05
LINC00539-202ENST00000423575 CSMD3Q7Z407 3707 aa8.52□□□□□ -1.05
LINC00539-202ENST00000423575 F5H768 121 aa8.51□□□□□ -1.05
LINC00539-202ENST00000423575 C3orf84H3BNL1 204 aa8.51□□□□□ -1.05
LINC00539-202ENST00000423575 SSTP61278 116 aa8.51□□□□□ -1.05
LINC00539-202ENST00000423575 RNF212Q495C1 297 aa8.51□□□□□ -1.05
LINC00539-202ENST00000423575 SPANXN1Q5VSR9 72 aa8.51□□□□□ -1.05
LINC00539-202ENST00000423575 OR4C5Q8NGB2 326 aa8.51□□□□□ -1.05
LINC00539-202ENST00000423575 PGLYRP4Q96LB8 373 aa8.51□□□□□ -1.05
LINC00539-202ENST00000423575 SAMD10Q9BYL1 202 aa8.51□□□□□ -1.05
LINC00539-202ENST00000423575 HIGD1CA8MV81 97 aa8.5□□□□□ -1.05
LINC00539-202ENST00000423575 A8MWV9 139 aa8.5□□□□□ -1.05
LINC00539-202ENST00000423575 F2Z2F3 143 aa8.5□□□□□ -1.05
LINC00539-202ENST00000423575 CACNG7P62955 275 aa8.5□□□□□ -1.05
LINC00539-202ENST00000423575 FHL2Q14192 279 aa8.5□□□□□ -1.05
LINC00539-202ENST00000423575 CASC10Q5T4H9 136 aa8.5□□□□□ -1.05
LINC00539-202ENST00000423575 CNFNQ9BYD5 112 aa8.5□□□□□ -1.05
LINC00539-202ENST00000423575 GFRA4Q9GZZ7 299 aa8.5□□□□□ -1.05
LINC00539-202ENST00000423575 MSRB1Q9NZV6 116 aa8.5□□□□□ -1.05
LINC00539-202ENST00000423575 IGHV4-4A0A075B6R2 117 aa8.49□□□□□ -1.05
LINC00539-202ENST00000423575 IGHV3-73A0A0B4J1V6 119 aa8.49□□□□□ -1.05
LINC00539-202ENST00000423575 SMIM27A0A1W2PRY6 76 aa8.49□□□□□ -1.05
LINC00539-202ENST00000423575 FAM231BA6NCW3 169 aa8.49□□□□□ -1.05
LINC00539-202ENST00000423575 MT-ND4LP03901 98 aa8.49□□□□□ -1.05
LINC00539-202ENST00000423575 FOXA3P55318 350 aaPredicted RBP8.49□□□□□ -1.05
LINC00539-202ENST00000423575 UFSP1Q6NVU6 142 aa8.49□□□□□ -1.05
LINC00539-202ENST00000423575 TMEM88Q6PEY1 159 aa8.49□□□□□ -1.05
LINC00539-202ENST00000423575 KLK5Q9Y337 293 aaPredicted RBP8.49□□□□□ -1.05
LINC00539-202ENST00000423575 TRAV26-1A0A087WT03 109 aa8.48□□□□□ -1.05
LINC00539-202ENST00000423575 A0A087WWL8 130 aa8.48□□□□□ -1.05
LINC00539-202ENST00000423575 TRGV4A0A0C4DH28 118 aa8.48□□□□□ -1.05
LINC00539-202ENST00000423575 IGLL5B9A064 214 aa8.48□□□□□ -1.05
LINC00539-202ENST00000423575 PPP1R2P9O14990 202 aa8.48□□□□□ -1.05
LINC00539-202ENST00000423575 CRYGDP07320 174 aa8.48□□□□□ -1.05
LINC00539-202ENST00000423575 WDR73Q6P4I2 378 aa8.48□□□□□ -1.05
LINC00539-202ENST00000423575 NUP35Q8NFH5 326 aa8.48□□□□□ -1.05
LINC00539-202ENST00000423575 AP1S3Q96PC3 154 aa8.48□□□□□ -1.05
LINC00539-202ENST00000423575 TENM2Q9NT68 2774 aa8.48□□□□□ -1.05
LINC00539-202ENST00000423575 A0A0J9YY99 117 aa8.47□□□□□ -1.05
LINC00539-202ENST00000423575 RHODO00212 210 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms