RNA–Protein interactions for RNA: ENST00000422245.5

SQSTM1-203, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-203ENST00000422245 XGP55808 180 aa7.77□□□□□ -1.17
SQSTM1-203ENST00000422245 KRTAP10-1P60331 282 aa7.77□□□□□ -1.17
SQSTM1-203ENST00000422245 PIK3CD-AS1Q5SR53 167 aa7.77□□□□□ -1.17
SQSTM1-203ENST00000422245 LELP1Q5T871 98 aa7.77□□□□□ -1.17
SQSTM1-203ENST00000422245 NTN5Q8WTR8 489 aaPredicted RBP7.77□□□□□ -1.17
SQSTM1-203ENST00000422245 IGHV3-73A0A0B4J1V6 119 aa7.76□□□□□ -1.17
SQSTM1-203ENST00000422245 CTXND1A0A1B0GTU2 59 aa7.76□□□□□ -1.17
SQSTM1-203ENST00000422245 RNASE3P12724 160 aaKnown RBP7.76□□□□□ -1.17
SQSTM1-203ENST00000422245 GCSHP23434 173 aa7.76□□□□□ -1.17
SQSTM1-203ENST00000422245 LAGE3Q14657 143 aa7.76□□□□□ -1.17
SQSTM1-203ENST00000422245 ZFP2Q6ZN57 461 aa7.76□□□□□ -1.17
SQSTM1-203ENST00000422245 GTSF1LQ9H1H1 148 aa7.76□□□□□ -1.17
SQSTM1-203ENST00000422245 ARL2-SNX15V9GYD0 113 aa7.76□□□□□ -1.17
SQSTM1-203ENST00000422245 FXYD6-FXYD2A0A087WZ82 144 aa7.75□□□□□ -1.17
SQSTM1-203ENST00000422245 LRCOL1A6NCL2 159 aa7.75□□□□□ -1.17
SQSTM1-203ENST00000422245 RNF222A6NCQ9 220 aa7.75□□□□□ -1.17
SQSTM1-203ENST00000422245 PGPEP1LA6NFU8 196 aa7.75□□□□□ -1.17
SQSTM1-203ENST00000422245 A8MWV9 139 aa7.75□□□□□ -1.17
SQSTM1-203ENST00000422245 IFNA7P01567 189 aa7.75□□□□□ -1.17
SQSTM1-203ENST00000422245 S100A4P26447 101 aaKnown RBP7.75□□□□□ -1.17
SQSTM1-203ENST00000422245 ASIPP42127 132 aa7.75□□□□□ -1.17
SQSTM1-203ENST00000422245 Q5BKY6 102 aa7.75□□□□□ -1.17
SQSTM1-203ENST00000422245 RPL7L1Q6DKI1 246 aaKnown RBP7.75□□□□□ -1.17
SQSTM1-203ENST00000422245 Q86TA4 180 aa7.75□□□□□ -1.17
SQSTM1-203ENST00000422245 ATP6V0E2Q8NHE4 81 aa7.75□□□□□ -1.17
SQSTM1-203ENST00000422245 FRZBQ92765 325 aa7.75□□□□□ -1.17
SQSTM1-203ENST00000422245 NKX6-2Q9C056 277 aaPredicted RBP7.75□□□□□ -1.17
SQSTM1-203ENST00000422245 PARLQ9H300 379 aa7.75□□□□□ -1.17
SQSTM1-203ENST00000422245 IGLV5-52A0A0A0MRZ9 124 aa7.74□□□□□ -1.17
SQSTM1-203ENST00000422245 IGKV3D-20A0A0C4DH25 116 aa7.74□□□□□ -1.17
SQSTM1-203ENST00000422245 PEX7O00628 323 aa7.74□□□□□ -1.17
SQSTM1-203ENST00000422245 IGHV3-30P01768 117 aa7.74□□□□□ -1.17
SQSTM1-203ENST00000422245 IGHV3-33P01772 117 aa7.74□□□□□ -1.17
SQSTM1-203ENST00000422245 LINC00694P0DN24 101 aa7.74□□□□□ -1.17
SQSTM1-203ENST00000422245 IGHV3-30-3P0DP02 117 aa7.74□□□□□ -1.17
SQSTM1-203ENST00000422245 IGHV3-30-5P0DP03 117 aa7.74□□□□□ -1.17
SQSTM1-203ENST00000422245 ZNF726P1Q15940 193 aa7.74□□□□□ -1.17
SQSTM1-203ENST00000422245 Q5VSD8 79 aa7.74□□□□□ -1.17
SQSTM1-203ENST00000422245 HIST1H2BAQ96A08 127 aa7.74□□□□□ -1.17
SQSTM1-203ENST00000422245 Q9HAA7 133 aa7.74□□□□□ -1.17
SQSTM1-203ENST00000422245 DMBT1Q9UGM3 2413 aaPredicted RBP7.73□□□□□ -1.17
SQSTM1-203ENST00000422245 TRAV34A0A0B4J273 112 aa7.73□□□□□ -1.17
SQSTM1-203ENST00000422245 FABP5P3A8MUU1 101 aa7.73□□□□□ -1.17
SQSTM1-203ENST00000422245 RHODO00212 210 aa7.73□□□□□ -1.17
SQSTM1-203ENST00000422245 UBE2G2P60604 165 aa7.73□□□□□ -1.17
SQSTM1-203ENST00000422245 LGALSLQ3ZCW2 172 aaPredicted RBP7.73□□□□□ -1.17
SQSTM1-203ENST00000422245 AKR1C8PQ5T2L2 129 aa7.73□□□□□ -1.17
SQSTM1-203ENST00000422245 Q8N814 137 aa7.73□□□□□ -1.17
SQSTM1-203ENST00000422245 OR2T35Q8NGX2 323 aa7.73□□□□□ -1.17
SQSTM1-203ENST00000422245 LINC00479Q96M42 142 aa7.73□□□□□ -1.17
SQSTM1-203ENST00000422245 TMEM70Q9BUB7 260 aa7.73□□□□□ -1.17
SQSTM1-203ENST00000422245 IL36BQ9NZH7 164 aa7.73□□□□□ -1.17
SQSTM1-203ENST00000422245 FAM74A7A6NL05 159 aa7.72□□□□□ -1.17
SQSTM1-203ENST00000422245 B4DEV8 164 aa7.72□□□□□ -1.17
SQSTM1-203ENST00000422245 INAFM2P0DMQ5 153 aa7.72□□□□□ -1.17
SQSTM1-203ENST00000422245 SYT8Q8NBV8 401 aa7.72□□□□□ -1.17
SQSTM1-203ENST00000422245 TCEAL7Q9BRU2 100 aa7.72□□□□□ -1.17
SQSTM1-203ENST00000422245 TM2D2Q9BX73 214 aa7.72□□□□□ -1.17
SQSTM1-203ENST00000422245 A0A087WWC5 75 aa7.71□□□□□ -1.18
SQSTM1-203ENST00000422245 MAP1LC3B2A6NCE7 125 aa7.71□□□□□ -1.18
SQSTM1-203ENST00000422245 GAGE12JA6NER3 117 aa7.71□□□□□ -1.18
SQSTM1-203ENST00000422245 H3BVH4 76 aa7.71□□□□□ -1.18
SQSTM1-203ENST00000422245 FGF8P55075 233 aaPredicted RBP7.71□□□□□ -1.18
SQSTM1-203ENST00000422245 GAGE1Q13065 139 aa7.71□□□□□ -1.18
SQSTM1-203ENST00000422245 GAGE4Q13068 117 aa7.71□□□□□ -1.18
SQSTM1-203ENST00000422245 GAGE5Q13069 117 aa7.71□□□□□ -1.18
SQSTM1-203ENST00000422245 GAGE13Q4V321 117 aa7.71□□□□□ -1.18
SQSTM1-203ENST00000422245 TOR2AQ5JU69 321 aa7.71□□□□□ -1.18
SQSTM1-203ENST00000422245 FAM162BQ5T6X4 162 aa7.71□□□□□ -1.18
SQSTM1-203ENST00000422245 UFSP1Q6NVU6 142 aa7.71□□□□□ -1.18
SQSTM1-203ENST00000422245 Q6ZSN1 163 aa7.71□□□□□ -1.18
SQSTM1-203ENST00000422245 COX8CQ7Z4L0 72 aa7.71□□□□□ -1.18
SQSTM1-203ENST00000422245 OR11H4Q8NGC9 324 aa7.71□□□□□ -1.18
SQSTM1-203ENST00000422245 FMC1Q96HJ9 113 aa7.71□□□□□ -1.18
SQSTM1-203ENST00000422245 MAP1LC3BQ9GZQ8 125 aa7.71□□□□□ -1.18
SQSTM1-203ENST00000422245 ZFP30Q9Y2G7 519 aa7.71□□□□□ -1.18
SQSTM1-203ENST00000422245 FAT1Q14517 4588 aa7.71□□□□□ -1.18
SQSTM1-203ENST00000422245 TRAV8-3A0A0A6YYJ7 113 aa7.7□□□□□ -1.18
SQSTM1-203ENST00000422245 SH2D1AO60880 128 aa7.7□□□□□ -1.18
SQSTM1-203ENST00000422245 UBE2G1P62253 170 aa7.7□□□□□ -1.18
SQSTM1-203ENST00000422245 DNLZQ5SXM8 178 aa7.7□□□□□ -1.18
SQSTM1-203ENST00000422245 ZC2HC1AQ96GY0 325 aa7.7□□□□□ -1.18
SQSTM1-203ENST00000422245 TRBV6-1A0A0K0K1D8 114 aa7.69□□□□□ -1.18
SQSTM1-203ENST00000422245 KRBOX1C9JBD0 128 aa7.69□□□□□ -1.18
SQSTM1-203ENST00000422245 FAM229AH3BQW9 127 aa7.69□□□□□ -1.18
SQSTM1-203ENST00000422245 M0R036 132 aa7.69□□□□□ -1.18
SQSTM1-203ENST00000422245 FHITP49789 147 aa7.69□□□□□ -1.18
SQSTM1-203ENST00000422245 LINC01559Q495D7 138 aa7.69□□□□□ -1.18
SQSTM1-203ENST00000422245 C14orf178Q8N769 122 aaPredicted RBP7.69□□□□□ -1.18
SQSTM1-203ENST00000422245 STOML3Q8TAV4 291 aa7.69□□□□□ -1.18
SQSTM1-203ENST00000422245 SAMD10Q9BYL1 202 aa7.69□□□□□ -1.18
SQSTM1-203ENST00000422245 HERC1Q15751 4861 aa7.69□□□□□ -1.18
SQSTM1-203ENST00000422245 G3V3Q6 166 aa7.68□□□□□ -1.18
SQSTM1-203ENST00000422245 ARPC5O15511 151 aa7.68□□□□□ -1.18
SQSTM1-203ENST00000422245 LTAP01374 205 aa7.68□□□□□ -1.18
SQSTM1-203ENST00000422245 C1QBP02746 253 aa7.68□□□□□ -1.18
SQSTM1-203ENST00000422245 ARMS2P0C7Q2 107 aa7.68□□□□□ -1.18
SQSTM1-203ENST00000422245 SEC11BP0C7V7 166 aa7.68□□□□□ -1.18
SQSTM1-203ENST00000422245 CRIP1P50238 77 aa7.68□□□□□ -1.18
SQSTM1-203ENST00000422245 FAM74A4Q5TZK3 123 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms