RNA–Protein interactions for RNA: ENST00000421756.5

MCF2L-213, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best) BASIC

Gene MCF2L, Length 3,560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-213ENST00000421756 LINC01559Q495D7 138 aa10.1□□□□□ -0.79
MCF2L-213ENST00000421756 B4DSR2 109 aa10.1□□□□□ -0.79
MCF2L-213ENST00000421756 CD5LO43866 347 aa10.09□□□□□ -0.79
MCF2L-213ENST00000421756 JMJD8Q96S16 334 aa10.09□□□□□ -0.79
MCF2L-213ENST00000421756 UBE2V1Q13404 147 aa10.09□□□□□ -0.79
MCF2L-213ENST00000421756 FAM159AQ6UWV7 190 aa10.09□□□□□ -0.79
MCF2L-213ENST00000421756 C9orf139Q6ZV77 190 aa10.09□□□□□ -0.79
MCF2L-213ENST00000421756 ZFAND2AQ8N6M9 145 aa10.09□□□□□ -0.79
MCF2L-213ENST00000421756 DAZ1Q9NQZ3 744 aaKnown RBP10.09□□□□□ -0.79
MCF2L-213ENST00000421756 FAM223BA6NKX1 122 aa10.08□□□□□ -0.8
MCF2L-213ENST00000421756 KNCNA6PVL3 124 aa10.08□□□□□ -0.8
MCF2L-213ENST00000421756 FAM223AQ8IWN6 122 aa10.08□□□□□ -0.8
MCF2L-213ENST00000421756 IGHG2P01859 326 aa10.08□□□□□ -0.8
MCF2L-213ENST00000421756 SCGB3A1Q96QR1 104 aa10.08□□□□□ -0.8
MCF2L-213ENST00000421756 PEF1Q9UBV8 284 aaKnown RBP10.08□□□□□ -0.8
MCF2L-213ENST00000421756 IGHV3OR16-12A0A075B7B8 117 aa10.08□□□□□ -0.8
MCF2L-213ENST00000421756 TRAV21A0A0B4J279 112 aa10.08□□□□□ -0.8
MCF2L-213ENST00000421756 SCGB2A2Q13296 93 aa10.08□□□□□ -0.8
MCF2L-213ENST00000421756 IGHV3-64A0A075B6Q5 118 aa10.07□□□□□ -0.8
MCF2L-213ENST00000421756 A6NDX4 124 aa10.07□□□□□ -0.8
MCF2L-213ENST00000421756 LAGE3Q14657 143 aa10.07□□□□□ -0.8
MCF2L-213ENST00000421756 NDUFA4O00483 81 aa10.07□□□□□ -0.8
MCF2L-213ENST00000421756 IGKCP01834 107 aa10.07□□□□□ -0.8
MCF2L-213ENST00000421756 DPF1Q92782 380 aa10.07□□□□□ -0.8
MCF2L-213ENST00000421756 NXT2Q9NPJ8 142 aaKnown RBP10.07□□□□□ -0.8
MCF2L-213ENST00000421756 NHP2Q9NX24 153 aaKnown RBP10.06□□□□□ -0.8
MCF2L-213ENST00000421756 U3KQK5 164 aa10.06□□□□□ -0.8
MCF2L-213ENST00000421756 HOXA3O43365 443 aaPredicted RBP10.06□□□□□ -0.8
MCF2L-213ENST00000421756 C9orf47Q6ZRZ4 202 aa10.06□□□□□ -0.8
MCF2L-213ENST00000421756 CSTL1Q9H114 145 aa10.06□□□□□ -0.8
MCF2L-213ENST00000421756 MDFICQ9P1T7 246 aa10.06□□□□□ -0.8
MCF2L-213ENST00000421756 RPL39P62891 51 aaKnown RBP10.06□□□□□ -0.8
MCF2L-213ENST00000421756 ODF1Q14990 250 aa10.06□□□□□ -0.8
MCF2L-213ENST00000421756 ZNF56Q15929 161 aa10.06□□□□□ -0.8
MCF2L-213ENST00000421756 MS4A6AQ9H2W1 248 aa10.06□□□□□ -0.8
MCF2L-213ENST00000421756 COX6B1P14854 86 aa10.05□□□□□ -0.8
MCF2L-213ENST00000421756 CD300EQ496F6 205 aaPredicted RBP10.05□□□□□ -0.8
MCF2L-213ENST00000421756 TMEM190Q8WZ59 177 aa10.05□□□□□ -0.8
MCF2L-213ENST00000421756 GCN1Q92616 2671 aaKnown RBP10.05□□□□□ -0.8
MCF2L-213ENST00000421756 GAGE10A6NGK3 116 aa10.05□□□□□ -0.8
MCF2L-213ENST00000421756 PPBPP02775 128 aa10.05□□□□□ -0.8
MCF2L-213ENST00000421756 LGALS9BQ3B8N2 356 aa10.05□□□□□ -0.8
MCF2L-213ENST00000421756 LGALS9CQ6DKI2 356 aa10.05□□□□□ -0.8
MCF2L-213ENST00000421756 GATD1Q8NB37 220 aa10.05□□□□□ -0.8
MCF2L-213ENST00000421756 ORAOV1Q8WV07 137 aa10.05□□□□□ -0.8
MCF2L-213ENST00000421756 A0A0G2JLM5 398 aa10.05□□□□□ -0.8
MCF2L-213ENST00000421756 SLURP1P55000 103 aa10.05□□□□□ -0.8
MCF2L-213ENST00000421756 OPRPNQ99935 248 aaPredicted RBP10.05□□□□□ -0.8
MCF2L-213ENST00000421756 SMPXQ9UHP9 88 aa10.05□□□□□ -0.8
MCF2L-213ENST00000421756 FLNBO75369 2602 aaKnown RBP10.04□□□□□ -0.8
MCF2L-213ENST00000421756 FXYD2P54710 66 aa10.04□□□□□ -0.8
MCF2L-213ENST00000421756 Q8N8P6 123 aa10.04□□□□□ -0.8
MCF2L-213ENST00000421756 SUMO2P61956 95 aaKnown RBP10.04□□□□□ -0.8
MCF2L-213ENST00000421756 MAPKAPK5-AS1Q8N8E1 139 aa10.04□□□□□ -0.8
MCF2L-213ENST00000421756 NRACQ8N912 160 aa10.04□□□□□ -0.8
MCF2L-213ENST00000421756 VPS25Q9BRG1 176 aa10.04□□□□□ -0.8
MCF2L-213ENST00000421756 IGHV4OR15-8A0A075B7B6 117 aa10.04□□□□□ -0.8
MCF2L-213ENST00000421756 A0A087WW49 117 aa10.04□□□□□ -0.8
MCF2L-213ENST00000421756 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.04□□□□□ -0.8
MCF2L-213ENST00000421756 DEFB125Q8N687 156 aa10.04□□□□□ -0.8
MCF2L-213ENST00000421756 RASL10AQ92737 203 aa10.04□□□□□ -0.8
MCF2L-213ENST00000421756 DPM2O94777 84 aa10.03□□□□□ -0.8
MCF2L-213ENST00000421756 SRSF1Q07955 248 aaKnown RBP eCLIP10.03□□□□□ -0.8
MCF2L-213ENST00000421756 MEGF9Q9H1U4 602 aa10.03□□□□□ -0.8
MCF2L-213ENST00000421756 U3KQE9 123 aa10.03□□□□□ -0.8
MCF2L-213ENST00000421756 FGF6P10767 208 aa10.03□□□□□ -0.8
MCF2L-213ENST00000421756 RNASE13Q5GAN3 156 aaKnown RBP10.03□□□□□ -0.8
MCF2L-213ENST00000421756 KLHL30-AS1Q8NEE0 82 aa10.03□□□□□ -0.8
MCF2L-213ENST00000421756 USMG5Q96IX5 58 aa10.03□□□□□ -0.8
MCF2L-213ENST00000421756 OVOL1O14753 267 aa10.03□□□□□ -0.8
MCF2L-213ENST00000421756 DUSP14O95147 198 aaKnown RBP10.03□□□□□ -0.8
MCF2L-213ENST00000421756 GAGE1Q13065 139 aa10.03□□□□□ -0.8
MCF2L-213ENST00000421756 RBAKDNA6NC62 111 aa10.02□□□□□ -0.81
MCF2L-213ENST00000421756 C2orf66Q6UXQ4 117 aa10.02□□□□□ -0.81
MCF2L-213ENST00000421756 SMIM2Q9BVW6 85 aa10.02□□□□□ -0.81
MCF2L-213ENST00000421756 CYSLTR1Q9Y271 337 aa10.02□□□□□ -0.81
MCF2L-213ENST00000421756 RNASE3P12724 160 aaKnown RBP10.02□□□□□ -0.81
MCF2L-213ENST00000421756 SETXQ7Z333 2677 aaKnown RBP10.02□□□□□ -0.81
MCF2L-213ENST00000421756 HIST1H4GQ99525 98 aa10.01□□□□□ -0.81
MCF2L-213ENST00000421756 DPH3P1Q9H4G8 78 aa10.01□□□□□ -0.81
MCF2L-213ENST00000421756 ARL6IP6Q8N6S5 226 aa10.01□□□□□ -0.81
MCF2L-213ENST00000421756 SAP30O75446 220 aa10.01□□□□□ -0.81
MCF2L-213ENST00000421756 P0DMU3 169 aa10.01□□□□□ -0.81
MCF2L-213ENST00000421756 FAM231AP0DMU4 169 aa10.01□□□□□ -0.81
MCF2L-213ENST00000421756 FAM231CP0DMU5 169 aa10.01□□□□□ -0.81
MCF2L-213ENST00000421756 SCGB1D4Q6XE38 83 aa10.01□□□□□ -0.81
MCF2L-213ENST00000421756 HOXD3P31249 432 aaPredicted RBP10□□□□□ -0.81
MCF2L-213ENST00000421756 ID1P41134 155 aa10□□□□□ -0.81
MCF2L-213ENST00000421756 MRPL52Q86TS9 123 aaKnown RBP10□□□□□ -0.81
MCF2L-213ENST00000421756 APRG1Q8IVJ8 170 aa10□□□□□ -0.81
MCF2L-213ENST00000421756 BOD1L2Q8IYS8 172 aa10□□□□□ -0.81
MCF2L-213ENST00000421756 LINC01356Q8N9X3 169 aa10□□□□□ -0.81
MCF2L-213ENST00000421756 CHAC1Q9BUX1 264 aa10□□□□□ -0.81
MCF2L-213ENST00000421756 TRBV25-1A0A075B6N4 114 aa10□□□□□ -0.81
MCF2L-213ENST00000421756 GAGE12BA1L429 117 aa10□□□□□ -0.81
MCF2L-213ENST00000421756 PROK1P58294 105 aa10□□□□□ -0.81
MCF2L-213ENST00000421756 DEFB131AP59861 70 aa10□□□□□ -0.81
MCF2L-213ENST00000421756 Q96MF0 132 aa10□□□□□ -0.81
MCF2L-213ENST00000421756 HHLA3Q9XRX5 114 aa10□□□□□ -0.81
MCF2L-213ENST00000421756 CBY1Q9Y3M2 126 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms