RNA–Protein interactions for RNA: ENST00000420508.1

AP000550.1-201, humanhuman

TSL 1 (best) BASIC

Gene AP000550.1, Length 4,833 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000550.1-201ENST00000420508 GNRH2O43555 120 aa11.4□□□□□ -0.58
AP000550.1-201ENST00000420508 C2orf82Q6UX34 121 aa11.4□□□□□ -0.58
AP000550.1-201ENST00000420508 ADAMTSL5Q6ZMM2 481 aa11.4□□□□□ -0.58
AP000550.1-201ENST00000420508 Q6ZVH6 145 aa11.4□□□□□ -0.58
AP000550.1-201ENST00000420508 CACNA1GO43497 2377 aa11.39□□□□□ -0.59
AP000550.1-201ENST00000420508 PRO1854Q9UHT4 67 aa11.39□□□□□ -0.59
AP000550.1-201ENST00000420508 PLCE1Q9P212 2302 aa11.39□□□□□ -0.59
AP000550.1-201ENST00000420508 IGLC6P0CF74 106 aa11.39□□□□□ -0.59
AP000550.1-201ENST00000420508 C22orf34Q6ZV56 151 aa11.39□□□□□ -0.59
AP000550.1-201ENST00000420508 NDUFA12Q9UI09 145 aa11.39□□□□□ -0.59
AP000550.1-201ENST00000420508 ABCA4P78363 2273 aa11.39□□□□□ -0.59
AP000550.1-201ENST00000420508 IGHV3-53P01767 116 aa11.39□□□□□ -0.59
AP000550.1-201ENST00000420508 AKAP6Q13023 2319 aa11.38□□□□□ -0.59
AP000550.1-201ENST00000420508 TOMM6Q96B49 74 aa11.38□□□□□ -0.59
AP000550.1-201ENST00000420508 SELENOKQ9Y6D0 94 aa11.38□□□□□ -0.59
AP000550.1-201ENST00000420508 TRAV13-1A0A0B4J241 112 aa11.38□□□□□ -0.59
AP000550.1-201ENST00000420508 BLCAPP62952 87 aa11.38□□□□□ -0.59
AP000550.1-201ENST00000420508 SUMO4Q6EEV6 95 aa11.38□□□□□ -0.59
AP000550.1-201ENST00000420508 Q8N6K4 173 aa11.38□□□□□ -0.59
AP000550.1-201ENST00000420508 CCDC140Q96MF4 163 aa11.38□□□□□ -0.59
AP000550.1-201ENST00000420508 ZNRF2Q8NHG8 242 aa11.38□□□□□ -0.59
AP000550.1-201ENST00000420508 IGHG4P01861 327 aa11.37□□□□□ -0.59
AP000550.1-201ENST00000420508 PRAC2D3DTV9 90 aa11.37□□□□□ -0.59
AP000550.1-201ENST00000420508 LGALS9O00182 355 aa11.37□□□□□ -0.59
AP000550.1-201ENST00000420508 NAA38Q9BRA0 125 aaKnown RBP11.37□□□□□ -0.59
AP000550.1-201ENST00000420508 C2orf70A6NJV1 201 aa11.37□□□□□ -0.59
AP000550.1-201ENST00000420508 F6UB75 175 aa11.37□□□□□ -0.59
AP000550.1-201ENST00000420508 PAX4O43316 350 aa11.37□□□□□ -0.59
AP000550.1-201ENST00000420508 IFITM1P13164 125 aa11.37□□□□□ -0.59
AP000550.1-201ENST00000420508 UTF1Q5T230 341 aa11.37□□□□□ -0.59
AP000550.1-201ENST00000420508 C4orf3Q8WVX3 66 aa11.37□□□□□ -0.59
AP000550.1-201ENST00000420508 PPDPFLQ8WWR9 84 aa11.37□□□□□ -0.59
AP000550.1-201ENST00000420508 CCL24O00175 119 aa11.37□□□□□ -0.59
AP000550.1-201ENST00000420508 ASPHD1Q5U4P2 390 aa11.37□□□□□ -0.59
AP000550.1-201ENST00000420508 GAGE12JA6NER3 117 aa11.36□□□□□ -0.59
AP000550.1-201ENST00000420508 GAGE4Q13068 117 aa11.36□□□□□ -0.59
AP000550.1-201ENST00000420508 GAGE5Q13069 117 aa11.36□□□□□ -0.59
AP000550.1-201ENST00000420508 ZFP2Q6ZN57 461 aa11.36□□□□□ -0.59
AP000550.1-201ENST00000420508 HERV-K104P63124 156 aa11.36□□□□□ -0.59
AP000550.1-201ENST00000420508 K7EP13 123 aa11.36□□□□□ -0.59
AP000550.1-201ENST00000420508 C16orf74Q96GX8 76 aa11.36□□□□□ -0.59
AP000550.1-201ENST00000420508 INAFM2P0DMQ5 153 aa11.35□□□□□ -0.59
AP000550.1-201ENST00000420508 C12orf74Q32Q52 190 aa11.35□□□□□ -0.59
AP000550.1-201ENST00000420508 RNASE1P07998 156 aaKnown RBP11.35□□□□□ -0.59
AP000550.1-201ENST00000420508 MAPK1IP1LQ8NDC0 245 aa11.35□□□□□ -0.59
AP000550.1-201ENST00000420508 MAJINQ3KP22 176 aa11.35□□□□□ -0.59
AP000550.1-201ENST00000420508 OTOGLQ3ZCN5 2332 aa11.35□□□□□ -0.59
AP000550.1-201ENST00000420508 ANKHD1Q8IWZ3 2542 aaKnown RBP11.35□□□□□ -0.59
AP000550.1-201ENST00000420508 TEX48A0A1B0GUV7 120 aa11.34□□□□□ -0.59
AP000550.1-201ENST00000420508 NPSP0C0P6 89 aa11.34□□□□□ -0.59
AP000550.1-201ENST00000420508 GAGE2BQ13066 116 aa11.34□□□□□ -0.59
AP000550.1-201ENST00000420508 GAGE2EQ4V326 116 aa11.34□□□□□ -0.59
AP000550.1-201ENST00000420508 ZFAND6Q6FIF0 208 aa11.34□□□□□ -0.59
AP000550.1-201ENST00000420508 GAGE2DQ9UEU5 116 aa11.34□□□□□ -0.59
AP000550.1-201ENST00000420508 DAZ2Q13117 558 aaKnown RBP11.34□□□□□ -0.59
AP000550.1-201ENST00000420508 DAZ4Q86SG3 579 aaKnown RBP11.34□□□□□ -0.59
AP000550.1-201ENST00000420508 DAZ3Q9NR90 486 aaKnown RBP11.34□□□□□ -0.59
AP000550.1-201ENST00000420508 TTC28Q96AY4 2481 aa11.34□□□□□ -0.59
AP000550.1-201ENST00000420508 MSRB1Q9NZV6 116 aa11.34□□□□□ -0.59
AP000550.1-201ENST00000420508 A0A0J9YX75 114 aa11.34□□□□□ -0.59
AP000550.1-201ENST00000420508 TRAV13-2A0A0B4J235 113 aa11.33□□□□□ -0.6
AP000550.1-201ENST00000420508 ZFAND3Q9H8U3 227 aa11.33□□□□□ -0.6
AP000550.1-201ENST00000420508 DAD1P61803 113 aa11.33□□□□□ -0.6
AP000550.1-201ENST00000420508 TNRC6BQ9UPQ9 1833 aaKnown RBP11.33□□□□□ -0.6
AP000550.1-201ENST00000420508 ANKRD39Q53RE8 183 aa11.33□□□□□ -0.6
AP000550.1-201ENST00000420508 JPT2Q9H910 190 aa11.33□□□□□ -0.6
AP000550.1-201ENST00000420508 U3KQK5 164 aa11.33□□□□□ -0.6
AP000550.1-201ENST00000420508 C9JAW5 83 aa11.32□□□□□ -0.6
AP000550.1-201ENST00000420508 E9PLD3 99 aa11.32□□□□□ -0.6
AP000550.1-201ENST00000420508 U3KQE9 123 aa11.32□□□□□ -0.6
AP000550.1-201ENST00000420508 KIAA1549Q9HCM3 1950 aa11.32□□□□□ -0.6
AP000550.1-201ENST00000420508 IGHV4OR15-8A0A075B7B6 117 aa11.32□□□□□ -0.6
AP000550.1-201ENST00000420508 A0A087WW49 117 aa11.32□□□□□ -0.6
AP000550.1-201ENST00000420508 GATA1P15976 413 aaPredicted RBP11.32□□□□□ -0.6
AP000550.1-201ENST00000420508 DEFB130BP0DP73 79 aa11.32□□□□□ -0.6
AP000550.1-201ENST00000420508 DEFB130AP0DP74 79 aa11.32□□□□□ -0.6
AP000550.1-201ENST00000420508 RIPPLY3P57055 190 aa11.32□□□□□ -0.6
AP000550.1-201ENST00000420508 LINC00173Q6ZV60 143 aa11.32□□□□□ -0.6
AP000550.1-201ENST00000420508 SH2D6Q7Z4S9 175 aa11.32□□□□□ -0.6
AP000550.1-201ENST00000420508 C11orf86A6NJI1 115 aa11.31□□□□□ -0.6
AP000550.1-201ENST00000420508 ODF1Q14990 250 aa11.31□□□□□ -0.6
AP000550.1-201ENST00000420508 NBASA2RRP1 2371 aa11.31□□□□□ -0.6
AP000550.1-201ENST00000420508 GAGE7O76087 117 aa11.31□□□□□ -0.6
AP000550.1-201ENST00000420508 GAGE12FP0CL80 117 aa11.31□□□□□ -0.6
AP000550.1-201ENST00000420508 GAGE12GP0CL81 117 aa11.31□□□□□ -0.6
AP000550.1-201ENST00000420508 GAGE12IP0CL82 117 aa11.31□□□□□ -0.6
AP000550.1-201ENST00000420508 CACNA1BQ00975 2339 aa11.31□□□□□ -0.6
AP000550.1-201ENST00000420508 LINC00322Q6ZN03 302 aaPredicted RBP11.31□□□□□ -0.6
AP000550.1-201ENST00000420508 PCP2Q8IVA1 136 aa11.31□□□□□ -0.6
AP000550.1-201ENST00000420508 RPL39LQ96EH5 51 aaKnown RBP11.31□□□□□ -0.6
AP000550.1-201ENST00000420508 H3BMM0 161 aa11.3□□□□□ -0.6
AP000550.1-201ENST00000420508 UBE2WQ96B02 151 aa11.3□□□□□ -0.6
AP000550.1-201ENST00000420508 A0A0U1RRA0 63 aa11.3□□□□□ -0.6
AP000550.1-201ENST00000420508 ANAPC13Q9BS18 74 aa11.3□□□□□ -0.6
AP000550.1-201ENST00000420508 C9orf66Q5T8R8 295 aa11.3□□□□□ -0.6
AP000550.1-201ENST00000420508 SLURP1P55000 103 aa11.3□□□□□ -0.6
AP000550.1-201ENST00000420508 TMEM95Q3KNT9 176 aa11.3□□□□□ -0.6
AP000550.1-201ENST00000420508 GATD1Q8NB37 220 aa11.3□□□□□ -0.6
AP000550.1-201ENST00000420508 IGHV3-16A0A0C4DH30 117 aa11.29□□□□□ -0.6
AP000550.1-201ENST00000420508 FRMD6-AS1P0C7T7 363 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms