RNA–Protein interactions for RNA: ENST00000420482.5

PTPN4-202, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-202ENST00000420482 HIST1H2BAQ96A08 127 aa14.46□□□□□ -0.09
PTPN4-202ENST00000420482 C11orf21Q9P2W6 132 aa14.46□□□□□ -0.09
PTPN4-202ENST00000420482 A0A087WTM6 91 aa14.45□□□□□ -0.1
PTPN4-202ENST00000420482 OR10J3Q5JRS4 329 aa14.45□□□□□ -0.1
PTPN4-202ENST00000420482 ZNF506Q5JVG8 444 aa14.45□□□□□ -0.1
PTPN4-202ENST00000420482 A8MWV9 139 aa14.44□□□□□ -0.1
PTPN4-202ENST00000420482 PSCAO43653 123 aa14.44□□□□□ -0.1
PTPN4-202ENST00000420482 ASIPP42127 132 aa14.44□□□□□ -0.1
PTPN4-202ENST00000420482 UBE2G2P60604 165 aa14.44□□□□□ -0.1
PTPN4-202ENST00000420482 RGS21Q2M5E4 152 aa14.44□□□□□ -0.1
PTPN4-202ENST00000420482 PIK3CD-AS1Q5SR53 167 aa14.44□□□□□ -0.1
PTPN4-202ENST00000420482 SCRT2Q9NQ03 307 aa14.44□□□□□ -0.1
PTPN4-202ENST00000420482 ARL2-SNX15V9GYD0 113 aa14.44□□□□□ -0.1
PTPN4-202ENST00000420482 IGHV3-73A0A0B4J1V6 119 aa14.43□□□□□ -0.1
PTPN4-202ENST00000420482 PGPEP1LA6NFU8 196 aa14.43□□□□□ -0.1
PTPN4-202ENST00000420482 PEX7O00628 323 aa14.43□□□□□ -0.1
PTPN4-202ENST00000420482 LINC01556Q5JQF7 62 aa14.43□□□□□ -0.1
PTPN4-202ENST00000420482 TRAV34A0A0B4J273 112 aa14.42□□□□□ -0.1
PTPN4-202ENST00000420482 RNASE3P12724 160 aaKnown RBP14.42□□□□□ -0.1
PTPN4-202ENST00000420482 ZNF726P1Q15940 193 aa14.42□□□□□ -0.1
PTPN4-202ENST00000420482 DPPA3Q6W0C5 159 aa14.42□□□□□ -0.1
PTPN4-202ENST00000420482 ZFP2Q6ZN57 461 aa14.42□□□□□ -0.1
PTPN4-202ENST00000420482 STOML3Q8TAV4 291 aa14.42□□□□□ -0.1
PTPN4-202ENST00000420482 LINC00479Q96M42 142 aa14.42□□□□□ -0.1
PTPN4-202ENST00000420482 ARPC5O15511 151 aa14.41□□□□□ -0.1
PTPN4-202ENST00000420482 UBE2G1P62253 170 aa14.41□□□□□ -0.1
PTPN4-202ENST00000420482 LGALSLQ3ZCW2 172 aaPredicted RBP14.41□□□□□ -0.1
PTPN4-202ENST00000420482 LELP1Q5T871 98 aa14.41□□□□□ -0.1
PTPN4-202ENST00000420482 Q86TA4 180 aa14.41□□□□□ -0.1
PTPN4-202ENST00000420482 ATP6V0E2Q8NHE4 81 aa14.41□□□□□ -0.1
PTPN4-202ENST00000420482 TCEAL7Q9BRU2 100 aa14.41□□□□□ -0.1
PTPN4-202ENST00000420482 GTSF1LQ9H1H1 148 aa14.41□□□□□ -0.1
PTPN4-202ENST00000420482 ZFP30Q9Y2G7 519 aa14.41□□□□□ -0.1
PTPN4-202ENST00000420482 MAP1LC3B2A6NCE7 125 aa14.4□□□□□ -0.1
PTPN4-202ENST00000420482 FAM74A7A6NL05 159 aa14.4□□□□□ -0.1
PTPN4-202ENST00000420482 FGF8P55075 233 aaPredicted RBP14.4□□□□□ -0.1
PTPN4-202ENST00000420482 SYT8Q8NBV8 401 aa14.4□□□□□ -0.1
PTPN4-202ENST00000420482 FMC1Q96HJ9 113 aa14.4□□□□□ -0.1
PTPN4-202ENST00000420482 MAP1LC3BQ9GZQ8 125 aa14.4□□□□□ -0.1
PTPN4-202ENST00000420482 IL36BQ9NZH7 164 aa14.4□□□□□ -0.1
PTPN4-202ENST00000420482 B4DEV8 164 aa14.39□□□□□ -0.11
PTPN4-202ENST00000420482 IGKV3D-20A0A0C4DH25 116 aa14.38□□□□□ -0.11
PTPN4-202ENST00000420482 IBA57-AS1B1ANH7 110 aa14.38□□□□□ -0.11
PTPN4-202ENST00000420482 PARLQ9H300 379 aa14.38□□□□□ -0.11
PTPN4-202ENST00000420482 RHODO00212 210 aa14.37□□□□□ -0.11
PTPN4-202ENST00000420482 FHITP49789 147 aa14.37□□□□□ -0.11
PTPN4-202ENST00000420482 FAM162BQ5T6X4 162 aa14.37□□□□□ -0.11
PTPN4-202ENST00000420482 CST9LP1Q5W188 147 aa14.36□□□□□ -0.11
PTPN4-202ENST00000420482 H3BVH4 76 aa14.35□□□□□ -0.11
PTPN4-202ENST00000420482 DNLZQ5SXM8 178 aa14.35□□□□□ -0.11
PTPN4-202ENST00000420482 COX8CQ7Z4L0 72 aa14.35□□□□□ -0.11
PTPN4-202ENST00000420482 OR11H4Q8NGC9 324 aa14.35□□□□□ -0.11
PTPN4-202ENST00000420482 ZC2HC1AQ96GY0 325 aa14.35□□□□□ -0.11
PTPN4-202ENST00000420482 Q9HAA7 133 aa14.35□□□□□ -0.11
PTPN4-202ENST00000420482 A0A087WWC5 75 aa14.34□□□□□ -0.11
PTPN4-202ENST00000420482 M0R036 132 aa14.34□□□□□ -0.11
PTPN4-202ENST00000420482 IGHV3-30P01768 117 aa14.34□□□□□ -0.11
PTPN4-202ENST00000420482 IGHV3-33P01772 117 aa14.34□□□□□ -0.11
PTPN4-202ENST00000420482 IGHV3-30-3P0DP02 117 aa14.34□□□□□ -0.11
PTPN4-202ENST00000420482 IGHV3-30-5P0DP03 117 aa14.34□□□□□ -0.11
PTPN4-202ENST00000420482 GCSHP23434 173 aa14.34□□□□□ -0.11
PTPN4-202ENST00000420482 LAGE3Q14657 143 aa14.34□□□□□ -0.11
PTPN4-202ENST00000420482 NTN5Q8WTR8 489 aaPredicted RBP14.34□□□□□ -0.11
PTPN4-202ENST00000420482 TM2D2Q9BX73 214 aa14.34□□□□□ -0.11
PTPN4-202ENST00000420482 CYTL1Q9NRR1 136 aa14.34□□□□□ -0.11
PTPN4-202ENST00000420482 PHLDA3Q9Y5J5 127 aa14.34□□□□□ -0.11
PTPN4-202ENST00000420482 TRBV6-1A0A0K0K1D8 114 aa14.33□□□□□ -0.12
PTPN4-202ENST00000420482 GAGE12JA6NER3 117 aa14.33□□□□□ -0.12
PTPN4-202ENST00000420482 EPM2AB3EWF7 344 aa14.33□□□□□ -0.12
PTPN4-202ENST00000420482 KRBOX1C9JBD0 128 aa14.33□□□□□ -0.12
PTPN4-202ENST00000420482 G3V3Q6 166 aa14.33□□□□□ -0.12
PTPN4-202ENST00000420482 SH2D1AO60880 128 aa14.33□□□□□ -0.12
PTPN4-202ENST00000420482 ARMS2P0C7Q2 107 aa14.33□□□□□ -0.12
PTPN4-202ENST00000420482 TPT1P13693 172 aaKnown RBP14.33□□□□□ -0.12
PTPN4-202ENST00000420482 FUSP35637 526 aaKnown RBP eCLIP14.33□□□□□ -0.12
PTPN4-202ENST00000420482 AKR1C3P42330 323 aa14.33□□□□□ -0.12
PTPN4-202ENST00000420482 GAGE1Q13065 139 aa14.33□□□□□ -0.12
PTPN4-202ENST00000420482 GAGE4Q13068 117 aa14.33□□□□□ -0.12
PTPN4-202ENST00000420482 GAGE5Q13069 117 aa14.33□□□□□ -0.12
PTPN4-202ENST00000420482 ZNF345Q14585 488 aa14.33□□□□□ -0.12
PTPN4-202ENST00000420482 GAGE13Q4V321 117 aa14.33□□□□□ -0.12
PTPN4-202ENST00000420482 UMAD1C9J7I0 102 aa14.32□□□□□ -0.12
PTPN4-202ENST00000420482 TOR2AQ5JU69 321 aa14.32□□□□□ -0.12
PTPN4-202ENST00000420482 IGLV5-52A0A0A0MRZ9 124 aa14.31□□□□□ -0.12
PTPN4-202ENST00000420482 S100A9P06702 114 aaKnown RBP14.31□□□□□ -0.12
PTPN4-202ENST00000420482 DMRTA1Q5VZB9 504 aa14.31□□□□□ -0.12
PTPN4-202ENST00000420482 LTAP01374 205 aa14.3□□□□□ -0.12
PTPN4-202ENST00000420482 SEC11BP0C7V7 166 aa14.3□□□□□ -0.12
PTPN4-202ENST00000420482 CRIP1P50238 77 aa14.3□□□□□ -0.12
PTPN4-202ENST00000420482 ZNF674Q2M3X9 581 aa14.3□□□□□ -0.12
PTPN4-202ENST00000420482 FAM74A4Q5TZK3 123 aa14.3□□□□□ -0.12
PTPN4-202ENST00000420482 Q6ZSN1 163 aa14.3□□□□□ -0.12
PTPN4-202ENST00000420482 KCNRGQ8N5I3 272 aa14.3□□□□□ -0.12
PTPN4-202ENST00000420482 URGCP-MRPS24S4R325 110 aa14.3□□□□□ -0.12
PTPN4-202ENST00000420482 TRAV8-3A0A0A6YYJ7 113 aa14.29□□□□□ -0.12
PTPN4-202ENST00000420482 GRIFINA4D1Z8 144 aa14.29□□□□□ -0.12
PTPN4-202ENST00000420482 PFDN1O60925 122 aa14.29□□□□□ -0.12
PTPN4-202ENST00000420482 KRTAP10-1P60331 282 aa14.29□□□□□ -0.12
PTPN4-202ENST00000420482 EIF5AP63241 154 aaKnown RBP14.29□□□□□ -0.12
PTPN4-202ENST00000420482 LINC01559Q495D7 138 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 167.8 ms