RNA–Protein interactions for RNA: ENST00000419533.1

UBR4-206, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 5,583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-206ENST00000419533 MBD6Q96DN6 1003 aa6.57□□□□□ -1.36
UBR4-206ENST00000419533 GAGE2DQ9UEU5 116 aa6.57□□□□□ -1.36
UBR4-206ENST00000419533 C2orf70A6NJV1 201 aa6.57□□□□□ -1.36
UBR4-206ENST00000419533 CTSGP08311 255 aa6.57□□□□□ -1.36
UBR4-206ENST00000419533 COA6Q5JTJ3 125 aaKnown RBP6.57□□□□□ -1.36
UBR4-206ENST00000419533 C1orf43Q9BWL3 253 aa6.57□□□□□ -1.36
UBR4-206ENST00000419533 KIR2DL5BA0A0G2JN68 375 aa6.57□□□□□ -1.36
UBR4-206ENST00000419533 KIR2DL5BA0A0G2JPC4 375 aa6.57□□□□□ -1.36
UBR4-206ENST00000419533 GPHB5Q86YW7 130 aa6.57□□□□□ -1.36
UBR4-206ENST00000419533 KIR2DL5AQ8N109 375 aa6.57□□□□□ -1.36
UBR4-206ENST00000419533 RITA1Q96K30 269 aa6.57□□□□□ -1.36
UBR4-206ENST00000419533 KLK5Q9Y337 293 aaPredicted RBP6.57□□□□□ -1.36
UBR4-206ENST00000419533 SMAD5-AS1Q9Y6J3 95 aa6.57□□□□□ -1.36
UBR4-206ENST00000419533 TNRC6AQ8NDV7 1962 aaKnown RBP6.57□□□□□ -1.36
UBR4-206ENST00000419533 IGLV1-47P01700 117 aa6.56□□□□□ -1.36
UBR4-206ENST00000419533 HIST2H2BCQ6DN03 193 aa6.56□□□□□ -1.36
UBR4-206ENST00000419533 DNAJC9-AS1A6NH13 148 aa6.56□□□□□ -1.36
UBR4-206ENST00000419533 TRAV8-3A0A0A6YYJ7 113 aa6.56□□□□□ -1.36
UBR4-206ENST00000419533 A6NDX4 124 aa6.56□□□□□ -1.36
UBR4-206ENST00000419533 K7EMI3 77 aa6.56□□□□□ -1.36
UBR4-206ENST00000419533 TNFRSF13BO14836 293 aaPredicted RBP6.56□□□□□ -1.36
UBR4-206ENST00000419533 NXPH4O95158 308 aa6.56□□□□□ -1.36
UBR4-206ENST00000419533 CFHR4Q92496 578 aa6.56□□□□□ -1.36
UBR4-206ENST00000419533 IL17DQ8TAD2 202 aa6.56□□□□□ -1.36
UBR4-206ENST00000419533 SIGLEC8Q9NYZ4 499 aa6.56□□□□□ -1.36
UBR4-206ENST00000419533 NDUFA12Q9UI09 145 aa6.56□□□□□ -1.36
UBR4-206ENST00000419533 CRYGCP07315 174 aa6.55□□□□□ -1.36
UBR4-206ENST00000419533 K7EQD1 137 aa6.55□□□□□ -1.36
UBR4-206ENST00000419533 NPYP01303 97 aa6.55□□□□□ -1.36
UBR4-206ENST00000419533 ADAMTSL5Q6ZMM2 481 aa6.55□□□□□ -1.36
UBR4-206ENST00000419533 PCNX1Q96RV3 2341 aa6.55□□□□□ -1.36
UBR4-206ENST00000419533 H3BMM0 161 aa6.55□□□□□ -1.36
UBR4-206ENST00000419533 RPL32P62910 135 aaKnown RBP6.55□□□□□ -1.36
UBR4-206ENST00000419533 CLPSL2Q6UWE3 100 aa6.55□□□□□ -1.36
UBR4-206ENST00000419533 CITED2Q99967 270 aaPredicted RBP6.55□□□□□ -1.36
UBR4-206ENST00000419533 SPTAN1Q13813 2472 aaKnown RBP6.55□□□□□ -1.36
UBR4-206ENST00000419533 IGLV2-23P01705 113 aa6.55□□□□□ -1.36
UBR4-206ENST00000419533 GYPEP15421 78 aa6.55□□□□□ -1.36
UBR4-206ENST00000419533 UBE2BP63146 152 aa6.55□□□□□ -1.36
UBR4-206ENST00000419533 STPG4Q8N801 248 aa6.55□□□□□ -1.36
UBR4-206ENST00000419533 ATP6V0E2Q8NHE4 81 aa6.55□□□□□ -1.36
UBR4-206ENST00000419533 BUB3O43684 328 aa6.55□□□□□ -1.36
UBR4-206ENST00000419533 Q6ZQT7 251 aa6.55□□□□□ -1.36
UBR4-206ENST00000419533 UBE2WQ96B02 151 aa6.55□□□□□ -1.36
UBR4-206ENST00000419533 Q9HAA7 133 aa6.55□□□□□ -1.36
UBR4-206ENST00000419533 EGR2P11161 476 aaPredicted RBP6.54□□□□□ -1.36
UBR4-206ENST00000419533 NDUFA11Q86Y39 141 aa6.54□□□□□ -1.36
UBR4-206ENST00000419533 DOCK10Q96BY6 2186 aa6.54□□□□□ -1.36
UBR4-206ENST00000419533 IGKV1-17P01599 117 aa6.54□□□□□ -1.36
UBR4-206ENST00000419533 IGLL1P15814 213 aa6.54□□□□□ -1.36
UBR4-206ENST00000419533 CACNA1AO00555 2505 aa6.54□□□□□ -1.36
UBR4-206ENST00000419533 C9orf118A6NHY6 69 aa6.54□□□□□ -1.36
UBR4-206ENST00000419533 XCL1P47992 114 aa6.54□□□□□ -1.36
UBR4-206ENST00000419533 F8W735 103 aaPredicted RBP6.54□□□□□ -1.36
UBR4-206ENST00000419533 PTPRBP23467 1997 aa6.53□□□□□ -1.36
UBR4-206ENST00000419533 WI2-2373I1.2A0A1W2PRP0 233 aa6.53□□□□□ -1.36
UBR4-206ENST00000419533 HIST1H4AP62805 103 aaKnown RBP6.53□□□□□ -1.36
UBR4-206ENST00000419533 LGALS9BQ3B8N2 356 aa6.53□□□□□ -1.36
UBR4-206ENST00000419533 LGALS9CQ6DKI2 356 aa6.53□□□□□ -1.36
UBR4-206ENST00000419533 WFDC11Q8NEX6 87 aa6.53□□□□□ -1.36
UBR4-206ENST00000419533 TEX22C9J3V5 150 aa6.53□□□□□ -1.36
UBR4-206ENST00000419533 K7EP13 123 aa6.53□□□□□ -1.36
UBR4-206ENST00000419533 SPINK8P0C7L1 97 aa6.53□□□□□ -1.36
UBR4-206ENST00000419533 IGHV4-31P0DP07 118 aa6.53□□□□□ -1.36
UBR4-206ENST00000419533 DAZ2Q13117 558 aaKnown RBP6.53□□□□□ -1.36
UBR4-206ENST00000419533 DAZ4Q86SG3 579 aaKnown RBP6.53□□□□□ -1.36
UBR4-206ENST00000419533 DAZ3Q9NR90 486 aaKnown RBP6.53□□□□□ -1.36
UBR4-206ENST00000419533 SPANXA1Q9NS26 97 aa6.53□□□□□ -1.36
UBR4-206ENST00000419533 TRAV13-2A0A0B4J235 113 aa6.53□□□□□ -1.36
UBR4-206ENST00000419533 SCRT2Q9NQ03 307 aa6.53□□□□□ -1.36
UBR4-206ENST00000419533 F8VRH5 84 aa6.53□□□□□ -1.36
UBR4-206ENST00000419533 LMO4P61968 165 aa6.53□□□□□ -1.36
UBR4-206ENST00000419533 K7EP34 96 aa6.52□□□□□ -1.36
UBR4-206ENST00000419533 ADAMTS20P59510 1910 aa6.52□□□□□ -1.37
UBR4-206ENST00000419533 CREBBPQ92793 2442 aa6.52□□□□□ -1.37
UBR4-206ENST00000419533 TAL2Q16559 108 aa6.52□□□□□ -1.37
UBR4-206ENST00000419533 COX8AP10176 69 aa6.52□□□□□ -1.37
UBR4-206ENST00000419533 MSMPQ1L6U9 139 aa6.52□□□□□ -1.37
UBR4-206ENST00000419533 EDA2RQ9HAV5 297 aa6.52□□□□□ -1.37
UBR4-206ENST00000419533 MALRD1Q5VYJ5 2156 aa6.52□□□□□ -1.37
UBR4-206ENST00000419533 UTRNP46939 3433 aa6.52□□□□□ -1.37
UBR4-206ENST00000419533 WNK2Q9Y3S1 2297 aa6.52□□□□□ -1.37
UBR4-206ENST00000419533 SOCS3O14543 225 aa6.52□□□□□ -1.37
UBR4-206ENST00000419533 CRLF1O75462 422 aa6.52□□□□□ -1.37
UBR4-206ENST00000419533 TM2D2Q9BX73 214 aa6.52□□□□□ -1.37
UBR4-206ENST00000419533 DOPEY2Q9Y3R5 2298 aa6.51□□□□□ -1.37
UBR4-206ENST00000419533 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.51□□□□□ -1.37
UBR4-206ENST00000419533 IGKV2-29A2NJV5 120 aaPredicted RBP6.51□□□□□ -1.37
UBR4-206ENST00000419533 FSTL3O95633 263 aa6.51□□□□□ -1.37
UBR4-206ENST00000419533 Q6YL49 198 aa6.51□□□□□ -1.37
UBR4-206ENST00000419533 ODF3L1Q8IXM7 274 aa6.51□□□□□ -1.37
UBR4-206ENST00000419533 RBMY1FQ15415 496 aaKnown RBP6.51□□□□□ -1.37
UBR4-206ENST00000419533 GAGE2AQ6NT46 116 aa6.51□□□□□ -1.37
UBR4-206ENST00000419533 SLC25A29Q8N8R3 303 aa6.51□□□□□ -1.37
UBR4-206ENST00000419533 MRPL35Q9NZE8 188 aaKnown RBP6.51□□□□□ -1.37
UBR4-206ENST00000419533 J3QQQ9 107 aa6.51□□□□□ -1.37
UBR4-206ENST00000419533 DEFB135Q30KP9 77 aa6.51□□□□□ -1.37
UBR4-206ENST00000419533 ARFGEF3Q5TH69 2177 aa6.51□□□□□ -1.37
UBR4-206ENST00000419533 ODF3BA8MYP8 253 aa6.51□□□□□ -1.37
UBR4-206ENST00000419533 INAFM2P0DMQ5 153 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms