RNA–Protein interactions for RNA: ENST00000419277.5

HLA-DPA1-242, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

APPRIS P2 BASIC

Gene HLA-DPA1, Length 1,704 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-242ENST00000419277 COX8AP10176 69 aa10.86□□□□□ -0.67
HLA-DPA1-242ENST00000419277 SRD5A1P18405 259 aa10.86□□□□□ -0.67
HLA-DPA1-242ENST00000419277 MAJINQ3KP22 176 aa10.86□□□□□ -0.67
HLA-DPA1-242ENST00000419277 PIK3CD-AS1Q5SR53 167 aa10.86□□□□□ -0.67
HLA-DPA1-242ENST00000419277 WFDC3Q8IUB2 231 aa10.86□□□□□ -0.67
HLA-DPA1-242ENST00000419277 WFDC11Q8NEX6 87 aa10.86□□□□□ -0.67
HLA-DPA1-242ENST00000419277 C9orf85Q96MD7 179 aa10.86□□□□□ -0.67
HLA-DPA1-242ENST00000419277 TMEM160Q9NX00 188 aa10.86□□□□□ -0.67
HLA-DPA1-242ENST00000419277 TIMM8BQ9Y5J9 83 aaPredicted RBP10.86□□□□□ -0.67
HLA-DPA1-242ENST00000419277 DLEU1O43261 78 aa10.85□□□□□ -0.67
HLA-DPA1-242ENST00000419277 LINC00469Q8N7U9 141 aa10.85□□□□□ -0.67
HLA-DPA1-242ENST00000419277 OR11H1Q8NG94 326 aa10.85□□□□□ -0.67
HLA-DPA1-242ENST00000419277 CLUHP3Q96NS8 147 aa10.85□□□□□ -0.67
HLA-DPA1-242ENST00000419277 ZFHX3Q15911 3703 aa10.85□□□□□ -0.67
HLA-DPA1-242ENST00000419277 DNAJC9-AS1A6NH13 148 aa10.84□□□□□ -0.67
HLA-DPA1-242ENST00000419277 TCAPO15273 167 aa10.84□□□□□ -0.67
HLA-DPA1-242ENST00000419277 CD7P09564 240 aa10.84□□□□□ -0.67
HLA-DPA1-242ENST00000419277 HLA-DRB4P13762 266 aa10.84□□□□□ -0.67
HLA-DPA1-242ENST00000419277 HLA-DRB4X5D2U9 266 aa10.84□□□□□ -0.67
HLA-DPA1-242ENST00000419277 CSMD2Q7Z408 3487 aa10.84□□□□□ -0.67
HLA-DPA1-242ENST00000419277 IGHV1OR15-1A0A075B7D0 117 aa10.84□□□□□ -0.67
HLA-DPA1-242ENST00000419277 hDV102S1A0JD36 115 aa10.84□□□□□ -0.67
HLA-DPA1-242ENST00000419277 H0Y8G0 127 aa10.84□□□□□ -0.67
HLA-DPA1-242ENST00000419277 Q6ZSV7 163 aa10.84□□□□□ -0.67
HLA-DPA1-242ENST00000419277 TMEM158Q8WZ71 300 aa10.84□□□□□ -0.67
HLA-DPA1-242ENST00000419277 SPAG8Q99932 426 aaPredicted RBP10.84□□□□□ -0.67
HLA-DPA1-242ENST00000419277 ITPR3Q14573 2671 aa10.83□□□□□ -0.68
HLA-DPA1-242ENST00000419277 MXRA5Q9NR99 2828 aa10.83□□□□□ -0.68
HLA-DPA1-242ENST00000419277 SIVA1O15304 175 aa10.83□□□□□ -0.68
HLA-DPA1-242ENST00000419277 EDN2P20800 178 aa10.83□□□□□ -0.68
HLA-DPA1-242ENST00000419277 Q6ZQT7 251 aa10.83□□□□□ -0.68
HLA-DPA1-242ENST00000419277 KLHL30-AS1Q8NEE0 82 aa10.83□□□□□ -0.68
HLA-DPA1-242ENST00000419277 DYNLRB2Q8TF09 96 aa10.83□□□□□ -0.68
HLA-DPA1-242ENST00000419277 ZMAT4Q9H898 229 aa10.83□□□□□ -0.68
HLA-DPA1-242ENST00000419277 MYO9AB2RTY4 2548 aa10.82□□□□□ -0.68
HLA-DPA1-242ENST00000419277 KMT2BQ9UMN6 2715 aaPredicted RBP10.82□□□□□ -0.68
HLA-DPA1-242ENST00000419277 TRAV12-1A0A0B4J245 112 aa10.82□□□□□ -0.68
HLA-DPA1-242ENST00000419277 TRAV12-3A0A0B4J271 114 aa10.82□□□□□ -0.68
HLA-DPA1-242ENST00000419277 IGHV3-16A0A0C4DH30 117 aa10.82□□□□□ -0.68
HLA-DPA1-242ENST00000419277 RNASE1P07998 156 aaKnown RBP10.82□□□□□ -0.68
HLA-DPA1-242ENST00000419277 TFPI2P48307 235 aa10.82□□□□□ -0.68
HLA-DPA1-242ENST00000419277 DEFB1P60022 68 aa10.82□□□□□ -0.68
HLA-DPA1-242ENST00000419277 AMTNQ6UX39 209 aa10.82□□□□□ -0.68
HLA-DPA1-242ENST00000419277 C14orf178Q8N769 122 aaPredicted RBP10.82□□□□□ -0.68
HLA-DPA1-242ENST00000419277 RASL10AQ92737 203 aa10.82□□□□□ -0.68
HLA-DPA1-242ENST00000419277 C16orf95Q9H693 158 aa10.82□□□□□ -0.68
HLA-DPA1-242ENST00000419277 KIF25-AS1Q9Y6Z4 181 aa10.82□□□□□ -0.68
HLA-DPA1-242ENST00000419277 DOPEY2Q9Y3R5 2298 aa10.82□□□□□ -0.68
HLA-DPA1-242ENST00000419277 TEX15Q9BXT5 2789 aa10.82□□□□□ -0.68
HLA-DPA1-242ENST00000419277 GNRH2O43555 120 aa10.81□□□□□ -0.68
HLA-DPA1-242ENST00000419277 GATA1P15976 413 aaPredicted RBP10.81□□□□□ -0.68
HLA-DPA1-242ENST00000419277 PLNP26678 52 aa10.81□□□□□ -0.68
HLA-DPA1-242ENST00000419277 SLURP1P55000 103 aa10.81□□□□□ -0.68
HLA-DPA1-242ENST00000419277 FHL3Q13643 280 aa10.81□□□□□ -0.68
HLA-DPA1-242ENST00000419277 ODF1Q14990 250 aa10.81□□□□□ -0.68
HLA-DPA1-242ENST00000419277 DUX5Q96PT3 197 aa10.81□□□□□ -0.68
HLA-DPA1-242ENST00000419277 LINC00467Q9BRT7 94 aa10.81□□□□□ -0.68
HLA-DPA1-242ENST00000419277 EDA2RQ9HAV5 297 aa10.81□□□□□ -0.68
HLA-DPA1-242ENST00000419277 TRAV26-2A0A0B4J265 109 aa10.81□□□□□ -0.68
HLA-DPA1-242ENST00000419277 TRBV6-5A0A0K0K1A5 114 aa10.81□□□□□ -0.68
HLA-DPA1-242ENST00000419277 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.81□□□□□ -0.68
HLA-DPA1-242ENST00000419277 GAS8-AS1O95177 125 aa10.81□□□□□ -0.68
HLA-DPA1-242ENST00000419277 NUDT3O95989 172 aa10.81□□□□□ -0.68
HLA-DPA1-242ENST00000419277 PRSS1P07477 247 aa10.81□□□□□ -0.68
HLA-DPA1-242ENST00000419277 GAGE1Q13065 139 aa10.81□□□□□ -0.68
HLA-DPA1-242ENST00000419277 PTH2Q96A98 100 aa10.81□□□□□ -0.68
HLA-DPA1-242ENST00000419277 TOMM6Q96B49 74 aa10.81□□□□□ -0.68
HLA-DPA1-242ENST00000419277 DPM2O94777 84 aa10.8□□□□□ -0.68
HLA-DPA1-242ENST00000419277 MGPP08493 103 aa10.8□□□□□ -0.68
HLA-DPA1-242ENST00000419277 KHDC1LQ5JSQ8 128 aa10.8□□□□□ -0.68
HLA-DPA1-242ENST00000419277 ADAMTSL5Q6ZMM2 481 aa10.8□□□□□ -0.68
HLA-DPA1-242ENST00000419277 IGKCP01834 107 aa10.79□□□□□ -0.68
HLA-DPA1-242ENST00000419277 CMC4P56277 68 aaPredicted RBP10.79□□□□□ -0.68
HLA-DPA1-242ENST00000419277 BOD1L2Q8IYS8 172 aa10.79□□□□□ -0.68
HLA-DPA1-242ENST00000419277 JMJD8Q96S16 334 aa10.79□□□□□ -0.68
HLA-DPA1-242ENST00000419277 KIR2DL4Q99706 377 aa10.79□□□□□ -0.68
HLA-DPA1-242ENST00000419277 ZNF256Q9Y2P7 627 aaPredicted RBP10.79□□□□□ -0.68
HLA-DPA1-242ENST00000419277 MUC4Q99102 2169 aa10.78□□□□□ -0.68
HLA-DPA1-242ENST00000419277 H7C1H1 209 aa10.78□□□□□ -0.68
HLA-DPA1-242ENST00000419277 LINC00315P59091 139 aa10.78□□□□□ -0.68
HLA-DPA1-242ENST00000419277 BATFQ16520 125 aa10.78□□□□□ -0.68
HLA-DPA1-242ENST00000419277 SPINK13Q1W4C9 94 aa10.78□□□□□ -0.68
HLA-DPA1-242ENST00000419277 Q8N1Y9 231 aa10.78□□□□□ -0.68
HLA-DPA1-242ENST00000419277 ZNF418Q8TF45 676 aaPredicted RBP10.78□□□□□ -0.68
HLA-DPA1-242ENST00000419277 A0A087WX48 190 aa10.78□□□□□ -0.68
HLA-DPA1-242ENST00000419277 H3BMM0 161 aa10.78□□□□□ -0.68
HLA-DPA1-242ENST00000419277 VCYO14598 125 aa10.78□□□□□ -0.68
HLA-DPA1-242ENST00000419277 KRTAP1-1Q07627 177 aa10.78□□□□□ -0.68
HLA-DPA1-242ENST00000419277 DEFB114Q30KQ6 69 aa10.78□□□□□ -0.68
HLA-DPA1-242ENST00000419277 TMEM61Q8N0U2 210 aa10.78□□□□□ -0.68
HLA-DPA1-242ENST00000419277 C18orf15Q96N68 181 aa10.78□□□□□ -0.68
HLA-DPA1-242ENST00000419277 TSSC4Q9Y5U2 329 aaPredicted RBP10.78□□□□□ -0.68
HLA-DPA1-242ENST00000419277 DEFB131AP59861 70 aa10.77□□□□□ -0.69
HLA-DPA1-242ENST00000419277 DEFB136Q30KP8 78 aa10.77□□□□□ -0.69
HLA-DPA1-242ENST00000419277 RAX2Q96IS3 184 aa10.77□□□□□ -0.69
HLA-DPA1-242ENST00000419277 FLNAP21333 2647 aaKnown RBP10.76□□□□□ -0.69
HLA-DPA1-242ENST00000419277 CHD6Q8TD26 2715 aa10.76□□□□□ -0.69
HLA-DPA1-242ENST00000419277 TRBV27A0A0K0K1C4 114 aa10.76□□□□□ -0.69
HLA-DPA1-242ENST00000419277 SEC11AP67812 179 aa10.76□□□□□ -0.69
HLA-DPA1-242ENST00000419277 ERASQ7Z444 233 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 174.8 ms