RNA–Protein interactions for RNA: ENST00000418518.2

LINCMD1-201, Transcript of long intergenic non-protein coding RNA, muscle differentiation 1, humanhuman

TSL 5 BASIC

Gene LINCMD1, Length 462 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINCMD1-201ENST00000418518 TNFRSF6BO95407 300 aa6.71□□□□□ -1.34
LINCMD1-201ENST00000418518 LY6G6DO95868 133 aa6.71□□□□□ -1.34
LINCMD1-201ENST00000418518 NCR2O95944 276 aa6.71□□□□□ -1.34
LINCMD1-201ENST00000418518 EVI2AP22794 236 aa6.71□□□□□ -1.34
LINCMD1-201ENST00000418518 PROK1P58294 105 aa6.71□□□□□ -1.34
LINCMD1-201ENST00000418518 CTAG1AP78358 180 aa6.71□□□□□ -1.34
LINCMD1-201ENST00000418518 PET117Q6UWS5 81 aa6.71□□□□□ -1.34
LINCMD1-201ENST00000418518 LINC00173Q6ZV60 143 aa6.71□□□□□ -1.34
LINCMD1-201ENST00000418518 SPATA12Q7Z6I5 190 aa6.71□□□□□ -1.34
LINCMD1-201ENST00000418518 VAMP8Q9BV40 100 aa6.71□□□□□ -1.34
LINCMD1-201ENST00000418518 NXT2Q9NPJ8 142 aaKnown RBP6.71□□□□□ -1.34
LINCMD1-201ENST00000418518 NF1P21359 2839 aa6.71□□□□□ -1.34
LINCMD1-201ENST00000418518 NSD1Q96L73 2696 aaPredicted RBP6.7□□□□□ -1.34
LINCMD1-201ENST00000418518 IGHV3-16A0A0C4DH30 117 aa6.7□□□□□ -1.34
LINCMD1-201ENST00000418518 C20orf202A1L168 122 aa6.7□□□□□ -1.34
LINCMD1-201ENST00000418518 OR4C46A6NHA9 309 aa6.7□□□□□ -1.34
LINCMD1-201ENST00000418518 ADARB2-AS1A8MUL3 147 aa6.7□□□□□ -1.34
LINCMD1-201ENST00000418518 H3BMM0 161 aa6.7□□□□□ -1.34
LINCMD1-201ENST00000418518 SYS1-DBNDD2H3BUS1 97 aa6.7□□□□□ -1.34
LINCMD1-201ENST00000418518 GNRH2O43555 120 aa6.7□□□□□ -1.34
LINCMD1-201ENST00000418518 GAS8-AS1O95177 125 aa6.7□□□□□ -1.34
LINCMD1-201ENST00000418518 S100A4P26447 101 aaKnown RBP6.7□□□□□ -1.34
LINCMD1-201ENST00000418518 FAM159AQ6UWV7 190 aa6.7□□□□□ -1.34
LINCMD1-201ENST00000418518 Q8N8P6 123 aa6.7□□□□□ -1.34
LINCMD1-201ENST00000418518 DYNLRB2Q8TF09 96 aa6.7□□□□□ -1.34
LINCMD1-201ENST00000418518 AP1S3Q96PC3 154 aa6.7□□□□□ -1.34
LINCMD1-201ENST00000418518 DUX3Q96PT4 197 aa6.7□□□□□ -1.34
LINCMD1-201ENST00000418518 NDUFAF3Q9BU61 184 aa6.7□□□□□ -1.34
LINCMD1-201ENST00000418518 ZNF747Q9BV97 191 aa6.7□□□□□ -1.34
LINCMD1-201ENST00000418518 DPH3P1Q9H4G8 78 aa6.7□□□□□ -1.34
LINCMD1-201ENST00000418518 MAP6D1Q9H9H5 199 aa6.7□□□□□ -1.34
LINCMD1-201ENST00000418518 ZNF256Q9Y2P7 627 aaPredicted RBP6.7□□□□□ -1.34
LINCMD1-201ENST00000418518 PHLDA3Q9Y5J5 127 aa6.7□□□□□ -1.34
LINCMD1-201ENST00000418518 KIF25-AS1Q9Y6Z4 181 aa6.7□□□□□ -1.34
LINCMD1-201ENST00000418518 NACAE9PAV3 2078 aa6.7□□□□□ -1.34
LINCMD1-201ENST00000418518 SETXQ7Z333 2677 aaKnown RBP6.69□□□□□ -1.34
LINCMD1-201ENST00000418518 IGHV1OR15-1A0A075B7D0 117 aa6.69□□□□□ -1.34
LINCMD1-201ENST00000418518 TRAV12-3A0A0B4J271 114 aa6.69□□□□□ -1.34
LINCMD1-201ENST00000418518 HBDP02042 147 aa6.69□□□□□ -1.34
LINCMD1-201ENST00000418518 LINC00315P59091 139 aa6.69□□□□□ -1.34
LINCMD1-201ENST00000418518 DEFB131AP59861 70 aa6.69□□□□□ -1.34
LINCMD1-201ENST00000418518 SSTP61278 116 aa6.69□□□□□ -1.34
LINCMD1-201ENST00000418518 RPL32P62910 135 aaKnown RBP6.69□□□□□ -1.34
LINCMD1-201ENST00000418518 CD300EQ496F6 205 aaPredicted RBP6.69□□□□□ -1.34
LINCMD1-201ENST00000418518 LINC01545Q5VT33 79 aa6.69□□□□□ -1.34
LINCMD1-201ENST00000418518 OR2K2Q8NGT1 345 aa6.69□□□□□ -1.34
LINCMD1-201ENST00000418518 CITED2Q99967 270 aaPredicted RBP6.69□□□□□ -1.34
LINCMD1-201ENST00000418518 LINC00467Q9BRT7 94 aa6.69□□□□□ -1.34
LINCMD1-201ENST00000418518 NOTCH2Q04721 2471 aa6.68□□□□□ -1.34
LINCMD1-201ENST00000418518 LOC389332A0A1B0GUA5 103 aa6.68□□□□□ -1.34
LINCMD1-201ENST00000418518 RBMY1BA6NDE4 496 aaKnown RBP6.68□□□□□ -1.34
LINCMD1-201ENST00000418518 RBMY1EA6NEQ0 496 aaKnown RBP6.68□□□□□ -1.34
LINCMD1-201ENST00000418518 RBMY1DP0C7P1 496 aaKnown RBP6.68□□□□□ -1.34
LINCMD1-201ENST00000418518 FOSL1P15407 271 aa6.68□□□□□ -1.34
LINCMD1-201ENST00000418518 GATA1P15976 413 aaPredicted RBP6.68□□□□□ -1.34
LINCMD1-201ENST00000418518 SPINK13Q1W4C9 94 aa6.68□□□□□ -1.34
LINCMD1-201ENST00000418518 MRPL52Q86TS9 123 aaKnown RBP6.68□□□□□ -1.34
LINCMD1-201ENST00000418518 C14orf144Q96I85 54 aa6.68□□□□□ -1.34
LINCMD1-201ENST00000418518 SMR3AQ99954 134 aa6.68□□□□□ -1.34
LINCMD1-201ENST00000418518 C20orf78Q9BR46 151 aa6.68□□□□□ -1.34
LINCMD1-201ENST00000418518 MAP1LC3CQ9BXW4 147 aa6.68□□□□□ -1.34
LINCMD1-201ENST00000418518 SETD2Q9BYW2 2564 aaPredicted RBP6.68□□□□□ -1.34
LINCMD1-201ENST00000418518 TRGV11A0A075B6L2 103 aa6.67□□□□□ -1.34
LINCMD1-201ENST00000418518 TRAV9-2A0A087WT02 112 aa6.67□□□□□ -1.34
LINCMD1-201ENST00000418518 KNCNA6PVL3 124 aa6.67□□□□□ -1.34
LINCMD1-201ENST00000418518 K7EMI3 77 aa6.67□□□□□ -1.34
LINCMD1-201ENST00000418518 PPP1R17O96001 155 aa6.67□□□□□ -1.34
LINCMD1-201ENST00000418518 CD7P09564 240 aa6.67□□□□□ -1.34
LINCMD1-201ENST00000418518 FCER1GP30273 86 aa6.67□□□□□ -1.34
LINCMD1-201ENST00000418518 DEFA6Q01524 100 aa6.67□□□□□ -1.34
LINCMD1-201ENST00000418518 ODF3L2Q3SX64 289 aa6.67□□□□□ -1.34
LINCMD1-201ENST00000418518 PIK3CD-AS1Q5SR53 167 aa6.67□□□□□ -1.34
LINCMD1-201ENST00000418518 Q8N1Y9 231 aa6.67□□□□□ -1.34
LINCMD1-201ENST00000418518 RASL10AQ92737 203 aa6.67□□□□□ -1.34
LINCMD1-201ENST00000418518 PTH2Q96A98 100 aa6.67□□□□□ -1.34
LINCMD1-201ENST00000418518 FAM110AQ9BQ89 295 aa6.67□□□□□ -1.34
LINCMD1-201ENST00000418518 MIEN1Q9BRT3 115 aa6.67□□□□□ -1.34
LINCMD1-201ENST00000418518 SMIM2Q9BVW6 85 aa6.67□□□□□ -1.34
LINCMD1-201ENST00000418518 PAM16Q9Y3D7 125 aa6.67□□□□□ -1.34
LINCMD1-201ENST00000418518 C2CD3Q4AC94 2353 aa6.67□□□□□ -1.34
LINCMD1-201ENST00000418518 OTOGQ6ZRI0 2925 aa6.66□□□□□ -1.34
LINCMD1-201ENST00000418518 FN1P02751 2386 aaKnown RBP6.66□□□□□ -1.34
LINCMD1-201ENST00000418518 TRAV12-2A0A075B6T6 113 aa6.66□□□□□ -1.34
LINCMD1-201ENST00000418518 RBMY1A1P0DJD3 496 aaKnown RBP6.66□□□□□ -1.34
LINCMD1-201ENST00000418518 RBMY1CP0DJD4 496 aa6.66□□□□□ -1.34
LINCMD1-201ENST00000418518 IGLC3P0DOY3 106 aa6.66□□□□□ -1.34
LINCMD1-201ENST00000418518 RBMY1FQ15415 496 aaKnown RBP6.66□□□□□ -1.34
LINCMD1-201ENST00000418518 LGALS9BQ3B8N2 356 aa6.66□□□□□ -1.34
LINCMD1-201ENST00000418518 SPATA45Q537H7 98 aa6.66□□□□□ -1.34
LINCMD1-201ENST00000418518 LGALS9CQ6DKI2 356 aa6.66□□□□□ -1.34
LINCMD1-201ENST00000418518 TRAV26-2A0A0B4J265 109 aa6.65□□□□□ -1.34
LINCMD1-201ENST00000418518 A0A1W2PRX2 142 aa6.65□□□□□ -1.34
LINCMD1-201ENST00000418518 IGKV3-20P01619 116 aa6.65□□□□□ -1.34
LINCMD1-201ENST00000418518 CMC4P56277 68 aaPredicted RBP6.65□□□□□ -1.34
LINCMD1-201ENST00000418518 HIST2H2BDQ6DRA6 164 aa6.65□□□□□ -1.34
LINCMD1-201ENST00000418518 NDUFA11Q86Y39 141 aa6.65□□□□□ -1.34
LINCMD1-201ENST00000418518 C14orf178Q8N769 122 aaPredicted RBP6.65□□□□□ -1.34
LINCMD1-201ENST00000418518 C11orf44Q8N8P7 122 aa6.65□□□□□ -1.34
LINCMD1-201ENST00000418518 SYT8Q8NBV8 401 aa6.65□□□□□ -1.34
LINCMD1-201ENST00000418518 EDA2RQ9HAV5 297 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms