RNA–Protein interactions for RNA: ENST00000417300.1

GABRE-202, Transcript of gamma-aminobutyric acid type A receptor epsilon subunit, humanhuman

TSL 2

Gene GABRE, Length 619 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRE-202ENST00000417300 MUC21Q5SSG8 566 aa8.68□□□□□ -1.02
GABRE-202ENST00000417300 MORN3Q6PF18 240 aaPredicted RBP8.68□□□□□ -1.02
GABRE-202ENST00000417300 TMEM136Q6ZRR5 245 aa8.68□□□□□ -1.02
GABRE-202ENST00000417300 GATD1Q8NB37 220 aa8.68□□□□□ -1.02
GABRE-202ENST00000417300 S100A8P05109 93 aa8.67□□□□□ -1.02
GABRE-202ENST00000417300 RAB5BP61020 215 aa8.67□□□□□ -1.02
GABRE-202ENST00000417300 MUC7Q8TAX7 377 aa8.67□□□□□ -1.02
GABRE-202ENST00000417300 DNAH7Q8WXX0 4024 aa8.67□□□□□ -1.02
GABRE-202ENST00000417300 LINC00467Q9BRT7 94 aa8.67□□□□□ -1.02
GABRE-202ENST00000417300 TPPP3Q9BW30 176 aa8.67□□□□□ -1.02
GABRE-202ENST00000417300 TMA7Q9Y2S6 64 aaKnown RBP8.67□□□□□ -1.02
GABRE-202ENST00000417300 TRAPPC1Q9Y5R8 145 aa8.67□□□□□ -1.02
GABRE-202ENST00000417300 H3BVH4 76 aa8.66□□□□□ -1.02
GABRE-202ENST00000417300 CACNG7P62955 275 aa8.66□□□□□ -1.02
GABRE-202ENST00000417300 Q8N1Y9 231 aa8.66□□□□□ -1.02
GABRE-202ENST00000417300 DEFB125Q8N687 156 aa8.66□□□□□ -1.02
GABRE-202ENST00000417300 SCRT2Q9NQ03 307 aa8.66□□□□□ -1.02
GABRE-202ENST00000417300 TRGV11A0A075B6L2 103 aa8.65□□□□□ -1.02
GABRE-202ENST00000417300 IGHV4-4A0A075B6R2 117 aa8.65□□□□□ -1.02
GABRE-202ENST00000417300 GNRH2O43555 120 aa8.65□□□□□ -1.02
GABRE-202ENST00000417300 RNASE3P12724 160 aaKnown RBP8.65□□□□□ -1.02
GABRE-202ENST00000417300 S100A4P26447 101 aaKnown RBP8.65□□□□□ -1.02
GABRE-202ENST00000417300 CAMPP49913 170 aa8.65□□□□□ -1.02
GABRE-202ENST00000417300 EGFEM1PQ0D2K5 195 aa8.65□□□□□ -1.02
GABRE-202ENST00000417300 FABP9Q0Z7S8 132 aa8.65□□□□□ -1.02
GABRE-202ENST00000417300 ZNF493Q6ZR52 646 aa8.65□□□□□ -1.02
GABRE-202ENST00000417300 TMEM256Q8N2U0 113 aa8.65□□□□□ -1.02
GABRE-202ENST00000417300 FRZBQ92765 325 aa8.65□□□□□ -1.02
GABRE-202ENST00000417300 C1QTNF4Q9BXJ3 329 aa8.65□□□□□ -1.02
GABRE-202ENST00000417300 MRPL18Q9H0U6 180 aaKnown RBP8.65□□□□□ -1.02
GABRE-202ENST00000417300 XCL2Q9UBD3 114 aa8.65□□□□□ -1.02
GABRE-202ENST00000417300 ZMAT5Q9UDW3 170 aaKnown RBP8.65□□□□□ -1.02
GABRE-202ENST00000417300 IGHV3-16A0A0C4DH30 117 aa8.64□□□□□ -1.03
GABRE-202ENST00000417300 GIG44P09565 113 aaPredicted RBP8.64□□□□□ -1.03
GABRE-202ENST00000417300 NHLRC4P0CG21 123 aaPredicted RBP8.64□□□□□ -1.03
GABRE-202ENST00000417300 RPL35AP18077 110 aaKnown RBP8.64□□□□□ -1.03
GABRE-202ENST00000417300 RAB4BP61018 213 aa8.64□□□□□ -1.03
GABRE-202ENST00000417300 OR10AG1Q8NH19 301 aa8.64□□□□□ -1.03
GABRE-202ENST00000417300 C9orf85Q96MD7 179 aa8.64□□□□□ -1.03
GABRE-202ENST00000417300 NXPH4O95158 308 aa8.63□□□□□ -1.03
GABRE-202ENST00000417300 TRGC1P0CF51 173 aa8.63□□□□□ -1.03
GABRE-202ENST00000417300 NTF3P20783 257 aa8.63□□□□□ -1.03
GABRE-202ENST00000417300 ZFP82Q8N141 532 aa8.63□□□□□ -1.03
GABRE-202ENST00000417300 C1orf158Q8N1D5 194 aa8.63□□□□□ -1.03
GABRE-202ENST00000417300 TP53TG3Q9ULZ0 132 aa8.63□□□□□ -1.03
GABRE-202ENST00000417300 MUC21A0A0G2JKD1 596 aa8.62□□□□□ -1.03
GABRE-202ENST00000417300 MUC21A0A140T8X8 626 aa8.62□□□□□ -1.03
GABRE-202ENST00000417300 CBY3A6NI87 242 aa8.62□□□□□ -1.03
GABRE-202ENST00000417300 HIST1H2BKO60814 126 aa8.62□□□□□ -1.03
GABRE-202ENST00000417300 APCSP02743 223 aa8.62□□□□□ -1.03
GABRE-202ENST00000417300 HIST1H2BJP06899 126 aa8.62□□□□□ -1.03
GABRE-202ENST00000417300 HIST1H2BOP23527 126 aa8.62□□□□□ -1.03
GABRE-202ENST00000417300 HIST1H2BBP33778 126 aa8.62□□□□□ -1.03
GABRE-202ENST00000417300 HIST1H2BDP58876 126 aa8.62□□□□□ -1.03
GABRE-202ENST00000417300 HIST1H2BCP62807 126 aa8.62□□□□□ -1.03
GABRE-202ENST00000417300 SLAQ13239 276 aa8.62□□□□□ -1.03
GABRE-202ENST00000417300 TWIST1Q15672 202 aa8.62□□□□□ -1.03
GABRE-202ENST00000417300 HIST2H2BEQ16778 126 aa8.62□□□□□ -1.03
GABRE-202ENST00000417300 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.62□□□□□ -1.03
GABRE-202ENST00000417300 SPANXN1Q5VSR9 72 aa8.62□□□□□ -1.03
GABRE-202ENST00000417300 DMRTA1Q5VZB9 504 aa8.62□□□□□ -1.03
GABRE-202ENST00000417300 HIST1H2BHQ93079 126 aa8.62□□□□□ -1.03
GABRE-202ENST00000417300 LINC01587Q99440 93 aa8.62□□□□□ -1.03
GABRE-202ENST00000417300 HIST1H2BNQ99877 126 aa8.62□□□□□ -1.03
GABRE-202ENST00000417300 HIST1H2BMQ99879 126 aa8.62□□□□□ -1.03
GABRE-202ENST00000417300 TMEM191AQ9H0A3 160 aa8.62□□□□□ -1.03
GABRE-202ENST00000417300 PHLDA3Q9Y5J5 127 aa8.62□□□□□ -1.03
GABRE-202ENST00000417300 LOC102724200A0A096LPH7 203 aaPredicted RBP8.61□□□□□ -1.03
GABRE-202ENST00000417300 KIR2DL5BA0A0G2JN68 375 aa8.61□□□□□ -1.03
GABRE-202ENST00000417300 KIR2DL5BA0A0G2JPC4 375 aa8.61□□□□□ -1.03
GABRE-202ENST00000417300 KIR2DL5AQ8N109 375 aa8.61□□□□□ -1.03
GABRE-202ENST00000417300 CSNK1G2-AS1Q8NCQ2 148 aa8.61□□□□□ -1.03
GABRE-202ENST00000417300 KIR2DL5BQ8NHK3 375 aa8.61□□□□□ -1.03
GABRE-202ENST00000417300 CSTL1Q9H114 145 aa8.61□□□□□ -1.03
GABRE-202ENST00000417300 MSRB1Q9NZV6 116 aa8.61□□□□□ -1.03
GABRE-202ENST00000417300 MDFICQ9P1T7 246 aa8.61□□□□□ -1.03
GABRE-202ENST00000417300 GOLT1BQ9Y3E0 138 aa8.61□□□□□ -1.03
GABRE-202ENST00000417300 MUC4Q99102 2169 aa8.61□□□□□ -1.03
GABRE-202ENST00000417300 KRTAP10-11P60412 298 aa8.6□□□□□ -1.03
GABRE-202ENST00000417300 ZNF415Q09FC8 603 aa8.6□□□□□ -1.03
GABRE-202ENST00000417300 FAM104BQ5XKR9 115 aa8.6□□□□□ -1.03
GABRE-202ENST00000417300 TMEM208Q9BTX3 173 aa8.6□□□□□ -1.03
GABRE-202ENST00000417300 TIMM8BQ9Y5J9 83 aaPredicted RBP8.6□□□□□ -1.03
GABRE-202ENST00000417300 KIAA1109Q2LD37 5005 aa8.59□□□□□ -1.03
GABRE-202ENST00000417300 M0R381 172 aa8.59□□□□□ -1.03
GABRE-202ENST00000417300 APOC4P55056 127 aa8.59□□□□□ -1.03
GABRE-202ENST00000417300 SSTP61278 116 aa8.59□□□□□ -1.03
GABRE-202ENST00000417300 ZNF705AQ6ZN79 300 aaPredicted RBP8.59□□□□□ -1.03
GABRE-202ENST00000417300 SMIM15Q7Z3B0 74 aa8.59□□□□□ -1.03
GABRE-202ENST00000417300 C11orf72Q8NBR9 251 aa8.59□□□□□ -1.03
GABRE-202ENST00000417300 SYT8Q8NBV8 401 aa8.59□□□□□ -1.03
GABRE-202ENST00000417300 PTH2Q96A98 100 aa8.59□□□□□ -1.03
GABRE-202ENST00000417300 AP1S3Q96PC3 154 aa8.59□□□□□ -1.03
GABRE-202ENST00000417300 A8MZ25 164 aa8.58□□□□□ -1.04
GABRE-202ENST00000417300 IGHV4-30-4P0DP06 118 aa8.58□□□□□ -1.04
GABRE-202ENST00000417300 SRIP30626 198 aa8.58□□□□□ -1.04
GABRE-202ENST00000417300 KIAA1644Q3SXP7 199 aa8.58□□□□□ -1.04
GABRE-202ENST00000417300 COA6Q5JTJ3 125 aaKnown RBP8.58□□□□□ -1.04
GABRE-202ENST00000417300 PIK3CD-AS1Q5SR53 167 aa8.58□□□□□ -1.04
GABRE-202ENST00000417300 AMN1Q8IY45 258 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms