RNA–Protein interactions for RNA: ENST00000416581.1

LINC01398-201, Transcript of long intergenic non-protein coding RNA 1398, humanhuman

TSL 1 (best)

Gene LINC01398, Length 1,129 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01398-201ENST00000416581 HIST1H2BAQ96A08 127 aa9.12□□□□□ -0.95
LINC01398-201ENST00000416581 C8orf49Q96NF6 230 aa9.12□□□□□ -0.95
LINC01398-201ENST00000416581 MSRB1Q9NZV6 116 aa9.12□□□□□ -0.95
LINC01398-201ENST00000416581 RPH3ALQ9UNE2 315 aa9.12□□□□□ -0.95
LINC01398-201ENST00000416581 FBLL1A6NHQ2 334 aaKnown RBP9.11□□□□□ -0.95
LINC01398-201ENST00000416581 F6UZH7 168 aa9.11□□□□□ -0.95
LINC01398-201ENST00000416581 CIDEAO60543 219 aa9.11□□□□□ -0.95
LINC01398-201ENST00000416581 CYB561D1Q8N8Q1 229 aa9.11□□□□□ -0.95
LINC01398-201ENST00000416581 A0A087WTM6 91 aa9.1□□□□□ -0.95
LINC01398-201ENST00000416581 TRAV4A0A0B4J268 109 aa9.1□□□□□ -0.95
LINC01398-201ENST00000416581 K7EQD1 137 aa9.1□□□□□ -0.95
LINC01398-201ENST00000416581 PEX7O00628 323 aa9.1□□□□□ -0.95
LINC01398-201ENST00000416581 DNAH10OSP0CZ25 163 aa9.1□□□□□ -0.95
LINC01398-201ENST00000416581 BCL2P10415 239 aa9.1□□□□□ -0.95
LINC01398-201ENST00000416581 TIRAPP58753 221 aa9.1□□□□□ -0.95
LINC01398-201ENST00000416581 TDRG1Q3Y452 100 aa9.1□□□□□ -0.95
LINC01398-201ENST00000416581 PRR9Q5T870 116 aa9.1□□□□□ -0.95
LINC01398-201ENST00000416581 Q8TAT8 98 aa9.1□□□□□ -0.95
LINC01398-201ENST00000416581 GYPEP15421 78 aa9.09□□□□□ -0.95
LINC01398-201ENST00000416581 IFITM2Q01629 132 aa9.09□□□□□ -0.95
LINC01398-201ENST00000416581 MEF2BQ02080 365 aaPredicted RBP9.09□□□□□ -0.95
LINC01398-201ENST00000416581 TMEM75Q8N9X5 138 aa9.09□□□□□ -0.95
LINC01398-201ENST00000416581 KCNS1Q96KK3 526 aa9.09□□□□□ -0.95
LINC01398-201ENST00000416581 VAX2Q9UIW0 290 aa9.09□□□□□ -0.95
LINC01398-201ENST00000416581 DNAH5Q8TE73 4624 aa9.08□□□□□ -0.96
LINC01398-201ENST00000416581 TRAV8-1A0A0A6YYK1 113 aa9.08□□□□□ -0.96
LINC01398-201ENST00000416581 TRAV21A0A0B4J279 112 aa9.08□□□□□ -0.96
LINC01398-201ENST00000416581 M0R2P5 195 aa9.08□□□□□ -0.96
LINC01398-201ENST00000416581 RAB14P61106 215 aa9.08□□□□□ -0.96
LINC01398-201ENST00000416581 FLI1Q01543 452 aaPredicted RBP9.08□□□□□ -0.96
LINC01398-201ENST00000416581 TMEM183BQ1AE95 376 aa9.08□□□□□ -0.96
LINC01398-201ENST00000416581 MUC21Q5SSG8 566 aa9.08□□□□□ -0.96
LINC01398-201ENST00000416581 TMEM183AQ8IXX5 376 aa9.08□□□□□ -0.96
LINC01398-201ENST00000416581 OR4C5Q8NGB2 326 aa9.08□□□□□ -0.96
LINC01398-201ENST00000416581 NTN5Q8WTR8 489 aaPredicted RBP9.08□□□□□ -0.96
LINC01398-201ENST00000416581 RBFOX3A6NFN3 312 aa9.07□□□□□ -0.96
LINC01398-201ENST00000416581 PSCAO43653 123 aa9.07□□□□□ -0.96
LINC01398-201ENST00000416581 PDE6DO43924 150 aa9.07□□□□□ -0.96
LINC01398-201ENST00000416581 IGLV2-11P01706 119 aa9.07□□□□□ -0.96
LINC01398-201ENST00000416581 CRYGDP07320 174 aa9.07□□□□□ -0.96
LINC01398-201ENST00000416581 INAFM2P0DMQ5 153 aa9.07□□□□□ -0.96
LINC01398-201ENST00000416581 AKR1C3P42330 323 aa9.07□□□□□ -0.96
LINC01398-201ENST00000416581 C11orf52Q96A22 123 aa9.07□□□□□ -0.96
LINC01398-201ENST00000416581 ZNF479Q96JC4 524 aa9.07□□□□□ -0.96
LINC01398-201ENST00000416581 FAM210AQ96ND0 272 aa9.07□□□□□ -0.96
LINC01398-201ENST00000416581 NDFIP1Q9BT67 221 aa9.07□□□□□ -0.96
LINC01398-201ENST00000416581 SDF2L1Q9HCN8 221 aa9.07□□□□□ -0.96
LINC01398-201ENST00000416581 PSG8Q9UQ74 426 aa9.07□□□□□ -0.96
LINC01398-201ENST00000416581 APOBP04114 4563 aaKnown RBP9.07□□□□□ -0.96
LINC01398-201ENST00000416581 TRAV8-6A0A0B4J262 113 aa9.06□□□□□ -0.96
LINC01398-201ENST00000416581 TRAV34A0A0B4J273 112 aa9.06□□□□□ -0.96
LINC01398-201ENST00000416581 TRBV6-1A0A0K0K1D8 114 aa9.06□□□□□ -0.96
LINC01398-201ENST00000416581 SCO2A0A1W2PP80 73 aa9.06□□□□□ -0.96
LINC01398-201ENST00000416581 NDUFS6O75380 124 aaKnown RBP9.06□□□□□ -0.96
LINC01398-201ENST00000416581 S100A9P06702 114 aaKnown RBP9.06□□□□□ -0.96
LINC01398-201ENST00000416581 PFN1P07737 140 aaKnown RBP9.06□□□□□ -0.96
LINC01398-201ENST00000416581 ZNF506Q5JVG8 444 aa9.06□□□□□ -0.96
LINC01398-201ENST00000416581 CLLU1Q5K131 121 aa9.06□□□□□ -0.96
LINC01398-201ENST00000416581 WFDC10BQ8IUB3 73 aa9.06□□□□□ -0.96
LINC01398-201ENST00000416581 FMC1Q96HJ9 113 aa9.06□□□□□ -0.96
LINC01398-201ENST00000416581 SGK494Q96LW2 274 aa9.06□□□□□ -0.96
LINC01398-201ENST00000416581 LINC00479Q96M42 142 aa9.06□□□□□ -0.96
LINC01398-201ENST00000416581 MDFICQ9P1T7 246 aa9.06□□□□□ -0.96
LINC01398-201ENST00000416581 NAGKQ9UJ70 344 aa9.06□□□□□ -0.96
LINC01398-201ENST00000416581 IGHV3-38A0A0C4DH36 116 aa9.05□□□□□ -0.96
LINC01398-201ENST00000416581 SFTA3P0C7M3 94 aa9.05□□□□□ -0.96
LINC01398-201ENST00000416581 GCSHP23434 173 aa9.05□□□□□ -0.96
LINC01398-201ENST00000416581 UBE2G1P62253 170 aa9.05□□□□□ -0.96
LINC01398-201ENST00000416581 TOR2AQ5JU69 321 aa9.05□□□□□ -0.96
LINC01398-201ENST00000416581 SAPCD1Q5SSQ6 148 aa9.05□□□□□ -0.96
LINC01398-201ENST00000416581 PRNTQ86SH4 94 aa9.05□□□□□ -0.96
LINC01398-201ENST00000416581 NHLRC2Q8NBF2 726 aa9.05□□□□□ -0.96
LINC01398-201ENST00000416581 TVP23CQ96ET8 276 aa9.05□□□□□ -0.96
LINC01398-201ENST00000416581 TMEM70Q9BUB7 260 aa9.05□□□□□ -0.96
LINC01398-201ENST00000416581 EIF5A2Q9GZV4 153 aaKnown RBP9.05□□□□□ -0.96
LINC01398-201ENST00000416581 TREM1Q9NP99 234 aa9.05□□□□□ -0.96
LINC01398-201ENST00000416581 FAM229AH3BQW9 127 aa9.04□□□□□ -0.96
LINC01398-201ENST00000416581 RHOHQ15669 191 aa9.04□□□□□ -0.96
LINC01398-201ENST00000416581 LINC01556Q5JQF7 62 aa9.04□□□□□ -0.96
LINC01398-201ENST00000416581 Q5VSD8 79 aa9.04□□□□□ -0.96
LINC01398-201ENST00000416581 Q86TA4 180 aa9.04□□□□□ -0.96
LINC01398-201ENST00000416581 PRADC1Q9BSG0 188 aa9.04□□□□□ -0.96
LINC01398-201ENST00000416581 ZFP30Q9Y2G7 519 aa9.04□□□□□ -0.96
LINC01398-201ENST00000416581 IGHV3-16A0A0C4DH30 117 aa9.03□□□□□ -0.96
LINC01398-201ENST00000416581 TMEM250H0YL14 139 aa9.03□□□□□ -0.96
LINC01398-201ENST00000416581 RPL35P42766 123 aaKnown RBP9.03□□□□□ -0.96
LINC01398-201ENST00000416581 XGP55808 180 aa9.03□□□□□ -0.96
LINC01398-201ENST00000416581 LAGE3Q14657 143 aa9.03□□□□□ -0.96
LINC01398-201ENST00000416581 Q6ZQT7 251 aa9.03□□□□□ -0.96
LINC01398-201ENST00000416581 MED9Q9NWA0 146 aa9.03□□□□□ -0.96
LINC01398-201ENST00000416581 DMBT1Q9UGM3 2413 aaPredicted RBP9.02□□□□□ -0.97
LINC01398-201ENST00000416581 IGLV5-52A0A0A0MRZ9 124 aa9.02□□□□□ -0.97
LINC01398-201ENST00000416581 TRBV6-4A0A1B0GX49 114 aa9.02□□□□□ -0.97
LINC01398-201ENST00000416581 LTAP01374 205 aa9.02□□□□□ -0.97
LINC01398-201ENST00000416581 SMUG1Q53HV7 270 aa9.02□□□□□ -0.97
LINC01398-201ENST00000416581 COX8CQ7Z4L0 72 aa9.02□□□□□ -0.97
LINC01398-201ENST00000416581 SMDT1Q9H4I9 107 aa9.02□□□□□ -0.97
LINC01398-201ENST00000416581 TNFRSF18Q9Y5U5 241 aa9.02□□□□□ -0.97
LINC01398-201ENST00000416581 IBA57-AS1B1ANH7 110 aa9.01□□□□□ -0.97
LINC01398-201ENST00000416581 TYMSP04818 313 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms