RNA–Protein interactions for RNA: ENST00000414861.6

RIF1-202, Transcript of replication timing regulatory factor 1, humanhuman

TSL 1 (best)

Gene RIF1, Length 2,534 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-202ENST00000414861 X6R8D5 127 aa6.99□□□□□ -1.29
RIF1-202ENST00000414861 NACAE9PAV3 2078 aa6.99□□□□□ -1.29
RIF1-202ENST00000414861 A0A1B0GXF2 115 aa6.98□□□□□ -1.29
RIF1-202ENST00000414861 FAM210BQ96KR6 192 aa6.98□□□□□ -1.29
RIF1-202ENST00000414861 CNFNQ9BYD5 112 aa6.98□□□□□ -1.29
RIF1-202ENST00000414861 RETNQ9HD89 108 aa6.98□□□□□ -1.29
RIF1-202ENST00000414861 TRAV9-1A0A075B6T8 112 aa6.98□□□□□ -1.29
RIF1-202ENST00000414861 A0A1B0GUT8 65 aa6.98□□□□□ -1.29
RIF1-202ENST00000414861 PLAC8L1A1L4L8 177 aa6.98□□□□□ -1.29
RIF1-202ENST00000414861 MED14OSP0DP75 135 aa6.98□□□□□ -1.29
RIF1-202ENST00000414861 PRKDCP78527 4128 aaKnown RBP6.98□□□□□ -1.29
RIF1-202ENST00000414861 UBE2CO00762 179 aa6.97□□□□□ -1.29
RIF1-202ENST00000414861 TMEM263Q8WUH6 116 aaKnown RBP6.97□□□□□ -1.29
RIF1-202ENST00000414861 RCHY1Q96PM5 261 aa6.97□□□□□ -1.29
RIF1-202ENST00000414861 F2Z2F3 143 aa6.97□□□□□ -1.29
RIF1-202ENST00000414861 M0R381 172 aa6.97□□□□□ -1.29
RIF1-202ENST00000414861 NTF3P20783 257 aa6.97□□□□□ -1.29
RIF1-202ENST00000414861 CAMPP49913 170 aa6.97□□□□□ -1.29
RIF1-202ENST00000414861 ZNF415Q09FC8 603 aa6.97□□□□□ -1.29
RIF1-202ENST00000414861 RRN3P1Q2M238 152 aa6.97□□□□□ -1.29
RIF1-202ENST00000414861 DMRTA1Q5VZB9 504 aa6.97□□□□□ -1.29
RIF1-202ENST00000414861 Q6ZWC4 215 aa6.97□□□□□ -1.29
RIF1-202ENST00000414861 IL17DQ8TAD2 202 aa6.97□□□□□ -1.29
RIF1-202ENST00000414861 RNF183Q96D59 192 aa6.97□□□□□ -1.29
RIF1-202ENST00000414861 PHLDA3Q9Y5J5 127 aa6.97□□□□□ -1.29
RIF1-202ENST00000414861 NXPH4O95158 308 aa6.96□□□□□ -1.29
RIF1-202ENST00000414861 HBBP68871 147 aa6.96□□□□□ -1.29
RIF1-202ENST00000414861 SBSPONQ8IVN8 264 aa6.96□□□□□ -1.29
RIF1-202ENST00000414861 OR11H2Q8NH07 326 aa6.96□□□□□ -1.29
RIF1-202ENST00000414861 RAB5AP20339 215 aa6.96□□□□□ -1.3
RIF1-202ENST00000414861 TWIST1Q15672 202 aa6.96□□□□□ -1.3
RIF1-202ENST00000414861 DEFB121Q5J5C9 76 aa6.96□□□□□ -1.3
RIF1-202ENST00000414861 SPANXN1Q5VSR9 72 aa6.96□□□□□ -1.3
RIF1-202ENST00000414861 ATP5L2Q7Z4Y8 100 aa6.96□□□□□ -1.3
RIF1-202ENST00000414861 HUWE1Q7Z6Z7 4374 aaKnown RBP6.96□□□□□ -1.3
RIF1-202ENST00000414861 RIGQ13278 110 aa6.95□□□□□ -1.3
RIF1-202ENST00000414861 BORCS7Q96B45 105 aa6.95□□□□□ -1.3
RIF1-202ENST00000414861 C16orf74Q96GX8 76 aa6.95□□□□□ -1.3
RIF1-202ENST00000414861 OVOL2Q9BRP0 275 aa6.95□□□□□ -1.3
RIF1-202ENST00000414861 JPT2Q9H910 190 aa6.95□□□□□ -1.3
RIF1-202ENST00000414861 MEGF8Q7Z7M0 2845 aa6.95□□□□□ -1.3
RIF1-202ENST00000414861 IGHV4-4A0A075B6R2 117 aa6.95□□□□□ -1.3
RIF1-202ENST00000414861 DEFB4AO15263 64 aa6.95□□□□□ -1.3
RIF1-202ENST00000414861 TMEM136Q6ZRR5 245 aa6.95□□□□□ -1.3
RIF1-202ENST00000414861 Q8NAQ8 132 aa6.95□□□□□ -1.3
RIF1-202ENST00000414861 MRAPQ8TCY5 172 aa6.95□□□□□ -1.3
RIF1-202ENST00000414861 MRPL16Q9NX20 251 aaKnown RBP6.95□□□□□ -1.3
RIF1-202ENST00000414861 SNURFLB1AK76 121 aa6.94□□□□□ -1.3
RIF1-202ENST00000414861 RPS10P46783 165 aaKnown RBP6.94□□□□□ -1.3
RIF1-202ENST00000414861 EMP1P54849 157 aa6.94□□□□□ -1.3
RIF1-202ENST00000414861 RAB4BP61018 213 aa6.94□□□□□ -1.3
RIF1-202ENST00000414861 CACNG7P62955 275 aa6.94□□□□□ -1.3
RIF1-202ENST00000414861 ZFP82Q8N141 532 aa6.94□□□□□ -1.3
RIF1-202ENST00000414861 NOP10Q9NPE3 64 aaKnown RBP6.94□□□□□ -1.3
RIF1-202ENST00000414861 DNAH9Q9NYC9 4486 aa6.94□□□□□ -1.3
RIF1-202ENST00000414861 IGHV4-28A0A0C4DH34 117 aa6.94□□□□□ -1.3
RIF1-202ENST00000414861 EVI2AP22794 236 aa6.94□□□□□ -1.3
RIF1-202ENST00000414861 ZNF876PQ49A33 203 aa6.94□□□□□ -1.3
RIF1-202ENST00000414861 WDR73Q6P4I2 378 aa6.94□□□□□ -1.3
RIF1-202ENST00000414861 ZNF493Q6ZR52 646 aa6.94□□□□□ -1.3
RIF1-202ENST00000414861 M0R2P5 195 aa6.93□□□□□ -1.3
RIF1-202ENST00000414861 SLAQ13239 276 aa6.93□□□□□ -1.3
RIF1-202ENST00000414861 RASL11AQ6T310 242 aa6.93□□□□□ -1.3
RIF1-202ENST00000414861 Q6ZTI0 123 aa6.93□□□□□ -1.3
RIF1-202ENST00000414861 COL7A1Q02388 2944 aa6.93□□□□□ -1.3
RIF1-202ENST00000414861 TRGV1A0A0A0MS02 117 aa6.93□□□□□ -1.3
RIF1-202ENST00000414861 SMIM9A6NGZ8 99 aa6.93□□□□□ -1.3
RIF1-202ENST00000414861 GATD1Q8NB37 220 aa6.93□□□□□ -1.3
RIF1-202ENST00000414861 SAMD10Q9BYL1 202 aa6.93□□□□□ -1.3
RIF1-202ENST00000414861 TP53TG1Q9Y2A0 90 aa6.93□□□□□ -1.3
RIF1-202ENST00000414861 A0A087WWL8 130 aa6.92□□□□□ -1.3
RIF1-202ENST00000414861 A0A1B0GW15 77 aa6.92□□□□□ -1.3
RIF1-202ENST00000414861 TRGC2P03986 189 aa6.92□□□□□ -1.3
RIF1-202ENST00000414861 DAZ2Q13117 558 aaKnown RBP6.92□□□□□ -1.3
RIF1-202ENST00000414861 AMN1Q8IY45 258 aa6.92□□□□□ -1.3
RIF1-202ENST00000414861 C14orf178Q8N769 122 aaPredicted RBP6.92□□□□□ -1.3
RIF1-202ENST00000414861 SPXQ9BT56 116 aa6.92□□□□□ -1.3
RIF1-202ENST00000414861 GNB1LQ9BYB4 327 aa6.92□□□□□ -1.3
RIF1-202ENST00000414861 PHOX2AO14813 284 aa6.92□□□□□ -1.3
RIF1-202ENST00000414861 MIFP14174 115 aa6.92□□□□□ -1.3
RIF1-202ENST00000414861 SYT8Q8NBV8 401 aa6.92□□□□□ -1.3
RIF1-202ENST00000414861 FRZBQ92765 325 aa6.92□□□□□ -1.3
RIF1-202ENST00000414861 AP1S3Q96PC3 154 aa6.92□□□□□ -1.3
RIF1-202ENST00000414861 TM2D3Q9BRN9 247 aa6.92□□□□□ -1.3
RIF1-202ENST00000414861 TMEM191AQ9H0A3 160 aa6.92□□□□□ -1.3
RIF1-202ENST00000414861 MRPL18Q9H0U6 180 aaKnown RBP6.92□□□□□ -1.3
RIF1-202ENST00000414861 HLA-DQA1P01909 254 aa6.91□□□□□ -1.3
RIF1-202ENST00000414861 FABP9Q0Z7S8 132 aa6.91□□□□□ -1.3
RIF1-202ENST00000414861 KIAA1644Q3SXP7 199 aa6.91□□□□□ -1.3
RIF1-202ENST00000414861 RASL10AQ92737 203 aa6.91□□□□□ -1.3
RIF1-202ENST00000414861 RNF185Q96GF1 192 aa6.91□□□□□ -1.3
RIF1-202ENST00000414861 TRAPPC1Q9Y5R8 145 aa6.91□□□□□ -1.3
RIF1-202ENST00000414861 KIF25-AS1Q9Y6Z4 181 aa6.91□□□□□ -1.3
RIF1-202ENST00000414861 S100A8P05109 93 aa6.91□□□□□ -1.3
RIF1-202ENST00000414861 TRGC1P0CF51 173 aa6.91□□□□□ -1.3
RIF1-202ENST00000414861 DEFA6Q01524 100 aa6.91□□□□□ -1.3
RIF1-202ENST00000414861 FAM74A4Q5TZK3 123 aa6.91□□□□□ -1.3
RIF1-202ENST00000414861 POM121L12Q8N7R1 296 aa6.91□□□□□ -1.3
RIF1-202ENST00000414861 PTH2Q96A98 100 aa6.91□□□□□ -1.3
RIF1-202ENST00000414861 CELA1Q9UNI1 258 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms