RNA–Protein interactions for RNA: ENST00000413872.6

PHRF1-202, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-202ENST00000413872 K7EN84 100 aa13.38□□□□□ -0.27
PHRF1-202ENST00000413872 A0A0J9YY99 117 aa13.38□□□□□ -0.27
PHRF1-202ENST00000413872 PRSS29PA6NIE9 313 aa13.38□□□□□ -0.27
PHRF1-202ENST00000413872 ZNF106Q9H2Y7 1883 aaKnown RBP13.38□□□□□ -0.27
PHRF1-202ENST00000413872 MRPL35Q9NZE8 188 aaKnown RBP13.38□□□□□ -0.27
PHRF1-202ENST00000413872 ODF3BA8MYP8 253 aa13.37□□□□□ -0.27
PHRF1-202ENST00000413872 CCL18P55774 89 aa13.37□□□□□ -0.27
PHRF1-202ENST00000413872 TRAV8-3A0A0A6YYJ7 113 aa13.37□□□□□ -0.27
PHRF1-202ENST00000413872 C9orf47Q6ZRZ4 202 aa13.37□□□□□ -0.27
PHRF1-202ENST00000413872 C19orf84I3L1E1 186 aa13.37□□□□□ -0.27
PHRF1-202ENST00000413872 DNAJC9-AS1A6NH13 148 aa13.36□□□□□ -0.27
PHRF1-202ENST00000413872 ZNF664Q8N3J9 261 aa13.36□□□□□ -0.27
PHRF1-202ENST00000413872 C1orf43Q9BWL3 253 aa13.36□□□□□ -0.27
PHRF1-202ENST00000413872 SNHG12Q9BXW3 62 aa13.36□□□□□ -0.27
PHRF1-202ENST00000413872 IGKV2D-24A0A075B6R9 120 aa13.36□□□□□ -0.27
PHRF1-202ENST00000413872 ATP6V0E2Q8NHE4 81 aa13.36□□□□□ -0.27
PHRF1-202ENST00000413872 FREM1Q5H8C1 2179 aa13.35□□□□□ -0.27
PHRF1-202ENST00000413872 DAZ2Q13117 558 aaKnown RBP13.35□□□□□ -0.27
PHRF1-202ENST00000413872 DAZ4Q86SG3 579 aaKnown RBP13.35□□□□□ -0.27
PHRF1-202ENST00000413872 DAZ3Q9NR90 486 aaKnown RBP13.35□□□□□ -0.27
PHRF1-202ENST00000413872 ADAMTSL5Q6ZMM2 481 aa13.35□□□□□ -0.27
PHRF1-202ENST00000413872 K7EQD1 137 aa13.35□□□□□ -0.27
PHRF1-202ENST00000413872 CGB7P0DN87 165 aa13.35□□□□□ -0.27
PHRF1-202ENST00000413872 TRBV20-1A0A075B6N2 111 aa13.35□□□□□ -0.27
PHRF1-202ENST00000413872 J3QQQ9 107 aa13.35□□□□□ -0.27
PHRF1-202ENST00000413872 MED14OSP0DP75 135 aa13.35□□□□□ -0.27
PHRF1-202ENST00000413872 CITED2Q99967 270 aaPredicted RBP13.34□□□□□ -0.27
PHRF1-202ENST00000413872 TMEM126AQ9H061 195 aa13.34□□□□□ -0.27
PHRF1-202ENST00000413872 H3BMM0 161 aa13.34□□□□□ -0.27
PHRF1-202ENST00000413872 SMAD5-AS1Q9Y6J3 95 aa13.34□□□□□ -0.27
PHRF1-202ENST00000413872 FAM167A-AS1Q96KT0 104 aa13.34□□□□□ -0.27
PHRF1-202ENST00000413872 TRAV13-2A0A0B4J235 113 aa13.34□□□□□ -0.27
PHRF1-202ENST00000413872 NXPH4O95158 308 aa13.34□□□□□ -0.27
PHRF1-202ENST00000413872 IGLV2-14P01704 120 aa13.34□□□□□ -0.27
PHRF1-202ENST00000413872 TAL2Q16559 108 aa13.34□□□□□ -0.27
PHRF1-202ENST00000413872 GYPEP15421 78 aa13.33□□□□□ -0.28
PHRF1-202ENST00000413872 CSPG4Q6UVK1 2322 aa13.33□□□□□ -0.28
PHRF1-202ENST00000413872 IGKV1OR2-108A0A075B7D4 117 aa13.33□□□□□ -0.28
PHRF1-202ENST00000413872 BOD1L2Q8IYS8 172 aa13.33□□□□□ -0.28
PHRF1-202ENST00000413872 POLR3KQ9Y2Y1 108 aaPredicted RBP13.33□□□□□ -0.28
PHRF1-202ENST00000413872 IGHG4P01861 327 aa13.33□□□□□ -0.28
PHRF1-202ENST00000413872 INAFM2P0DMQ5 153 aa13.33□□□□□ -0.28
PHRF1-202ENST00000413872 IGHV4-31P0DP07 118 aa13.33□□□□□ -0.28
PHRF1-202ENST00000413872 ZNF843Q8N446 348 aa13.33□□□□□ -0.28
PHRF1-202ENST00000413872 FANCD2OSQ96PS1 177 aa13.32□□□□□ -0.28
PHRF1-202ENST00000413872 DENND4AQ7Z401 1863 aa13.32□□□□□ -0.28
PHRF1-202ENST00000413872 COX8AP10176 69 aa13.32□□□□□ -0.28
PHRF1-202ENST00000413872 UBE2WQ96B02 151 aa13.32□□□□□ -0.28
PHRF1-202ENST00000413872 NDUFA11Q86Y39 141 aa13.31□□□□□ -0.28
PHRF1-202ENST00000413872 SIGMAR1Q99720 223 aa13.31□□□□□ -0.28
PHRF1-202ENST00000413872 Q6YL49 198 aa13.31□□□□□ -0.28
PHRF1-202ENST00000413872 TRBV6-1A0A0K0K1D8 114 aa13.31□□□□□ -0.28
PHRF1-202ENST00000413872 MORN5Q5VZ52 161 aa13.31□□□□□ -0.28
PHRF1-202ENST00000413872 SUMO4Q6EEV6 95 aa13.31□□□□□ -0.28
PHRF1-202ENST00000413872 C9JAW5 83 aa13.3□□□□□ -0.28
PHRF1-202ENST00000413872 HERV-K104P63124 156 aa13.3□□□□□ -0.28
PHRF1-202ENST00000413872 ASPHD1Q5U4P2 390 aa13.3□□□□□ -0.28
PHRF1-202ENST00000413872 SLC25A29Q8N8R3 303 aa13.3□□□□□ -0.28
PHRF1-202ENST00000413872 PTPN13Q12923 2485 aa13.3□□□□□ -0.28
PHRF1-202ENST00000413872 XCL1P47992 114 aa13.3□□□□□ -0.28
PHRF1-202ENST00000413872 Q6ZWC4 215 aa13.3□□□□□ -0.28
PHRF1-202ENST00000413872 IGF1P05019 195 aa13.3□□□□□ -0.28
PHRF1-202ENST00000413872 KMT2EQ8IZD2 1858 aa13.29□□□□□ -0.28
PHRF1-202ENST00000413872 SPINK8P0C7L1 97 aa13.29□□□□□ -0.28
PHRF1-202ENST00000413872 CLPSL2Q6UWE3 100 aa13.29□□□□□ -0.28
PHRF1-202ENST00000413872 C10orf142B7Z368 130 aa13.29□□□□□ -0.28
PHRF1-202ENST00000413872 KIAA1549LQ6ZVL6 1849 aa13.29□□□□□ -0.28
PHRF1-202ENST00000413872 TMEM61Q8N0U2 210 aa13.29□□□□□ -0.28
PHRF1-202ENST00000413872 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.28□□□□□ -0.28
PHRF1-202ENST00000413872 IGKV2-29A2NJV5 120 aaPredicted RBP13.28□□□□□ -0.28
PHRF1-202ENST00000413872 SOCS3O14543 225 aa13.28□□□□□ -0.28
PHRF1-202ENST00000413872 GAGE2BQ13066 116 aa13.28□□□□□ -0.28
PHRF1-202ENST00000413872 GAGE2EQ4V326 116 aa13.28□□□□□ -0.28
PHRF1-202ENST00000413872 GAGE2DQ9UEU5 116 aa13.28□□□□□ -0.28
PHRF1-202ENST00000413872 IGLC2P0DOY2 106 aa13.28□□□□□ -0.28
PHRF1-202ENST00000413872 IGLC3P0DOY3 106 aa13.28□□□□□ -0.28
PHRF1-202ENST00000413872 Q6ZQT7 251 aa13.28□□□□□ -0.28
PHRF1-202ENST00000413872 DLEU1O43261 78 aa13.28□□□□□ -0.28
PHRF1-202ENST00000413872 ZNF747Q9BV97 191 aa13.28□□□□□ -0.28
PHRF1-202ENST00000413872 DYSFO75923 2080 aa13.28□□□□□ -0.28
PHRF1-202ENST00000413872 E7EUB6 86 aa13.28□□□□□ -0.28
PHRF1-202ENST00000413872 LURAP1LQ8IV03 231 aa13.28□□□□□ -0.28
PHRF1-202ENST00000413872 Q8N1Y9 231 aa13.28□□□□□ -0.28
PHRF1-202ENST00000413872 SCRT2Q9NQ03 307 aa13.28□□□□□ -0.28
PHRF1-202ENST00000413872 SIVA1O15304 175 aa13.27□□□□□ -0.28
PHRF1-202ENST00000413872 IL17DQ8TAD2 202 aa13.27□□□□□ -0.28
PHRF1-202ENST00000413872 NCOA6Q14686 2063 aaPredicted RBP13.27□□□□□ -0.28
PHRF1-202ENST00000413872 HIST1H4AP62805 103 aaKnown RBP13.27□□□□□ -0.29
PHRF1-202ENST00000413872 PRO1854Q9UHT4 67 aa13.27□□□□□ -0.29
PHRF1-202ENST00000413872 KLK5Q9Y337 293 aaPredicted RBP13.27□□□□□ -0.29
PHRF1-202ENST00000413872 A0A0J9YX75 114 aa13.26□□□□□ -0.29
PHRF1-202ENST00000413872 C11orf71Q6IPW1 123 aa13.26□□□□□ -0.29
PHRF1-202ENST00000413872 ZNF503Q96F45 646 aa13.26□□□□□ -0.29
PHRF1-202ENST00000413872 Q9HAA7 133 aa13.26□□□□□ -0.29
PHRF1-202ENST00000413872 UBE2V1Q13404 147 aa13.26□□□□□ -0.29
PHRF1-202ENST00000413872 WFDC11Q8NEX6 87 aa13.26□□□□□ -0.29
PHRF1-202ENST00000413872 P0C879 139 aa13.26□□□□□ -0.29
PHRF1-202ENST00000413872 PRAC2D3DTV9 90 aa13.26□□□□□ -0.29
PHRF1-202ENST00000413872 CRLF1O75462 422 aa13.26□□□□□ -0.29
PHRF1-202ENST00000413872 RNASE13Q5GAN3 156 aaKnown RBP13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 155.6 ms