RNA–Protein interactions for RNA: ENST00000413219.6

SDCBP-202, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SDCBP, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-202ENST00000413219 TCF15Q12870 199 aa13.32□□□□□ -0.28
SDCBP-202ENST00000413219 SRSF9Q13242 221 aaKnown RBP eCLIP13.32□□□□□ -0.28
SDCBP-202ENST00000413219 TCTEX1D4Q5JR98 221 aa13.32□□□□□ -0.28
SDCBP-202ENST00000413219 PLEKHB2Q96CS7 222 aa13.32□□□□□ -0.28
SDCBP-202ENST00000413219 WNK2Q9Y3S1 2297 aa13.32□□□□□ -0.28
SDCBP-202ENST00000413219 J3KRW8 73 aa13.32□□□□□ -0.28
SDCBP-202ENST00000413219 NPFFO15130 113 aa13.32□□□□□ -0.28
SDCBP-202ENST00000413219 CRYGDP07320 174 aa13.32□□□□□ -0.28
SDCBP-202ENST00000413219 CD7P09564 240 aa13.32□□□□□ -0.28
SDCBP-202ENST00000413219 TSPAN13O95857 204 aa13.31□□□□□ -0.28
SDCBP-202ENST00000413219 RNASE3P12724 160 aaKnown RBP13.31□□□□□ -0.28
SDCBP-202ENST00000413219 SMCPP49901 116 aaPredicted RBP13.31□□□□□ -0.28
SDCBP-202ENST00000413219 MOB4Q9Y3A3 225 aa13.31□□□□□ -0.28
SDCBP-202ENST00000413219 DCHS1Q96JQ0 3298 aa13.31□□□□□ -0.28
SDCBP-202ENST00000413219 LCNL1Q6ZST4 164 aa13.3□□□□□ -0.28
SDCBP-202ENST00000413219 LAMA5O15230 3695 aa13.3□□□□□ -0.28
SDCBP-202ENST00000413219 IGLV4-69A0A075B6H9 119 aa13.3□□□□□ -0.28
SDCBP-202ENST00000413219 SPRY2O43597 315 aa13.3□□□□□ -0.28
SDCBP-202ENST00000413219 DUSP14O95147 198 aaKnown RBP13.3□□□□□ -0.28
SDCBP-202ENST00000413219 RNASE4P34096 147 aaKnown RBP13.3□□□□□ -0.28
SDCBP-202ENST00000413219 TMEM141Q96I45 108 aa13.3□□□□□ -0.28
SDCBP-202ENST00000413219 KIF25-AS1Q9Y6Z4 181 aa13.3□□□□□ -0.28
SDCBP-202ENST00000413219 ZNF292O60281 2723 aa13.3□□□□□ -0.28
SDCBP-202ENST00000413219 IGIPA6NJ69 53 aa13.29□□□□□ -0.28
SDCBP-202ENST00000413219 C11orf86A6NJI1 115 aa13.29□□□□□ -0.28
SDCBP-202ENST00000413219 CLEC2AQ6UVW9 174 aa13.29□□□□□ -0.28
SDCBP-202ENST00000413219 ABCA4P78363 2273 aa13.29□□□□□ -0.28
SDCBP-202ENST00000413219 A0A0J9YY99 117 aa13.28□□□□□ -0.28
SDCBP-202ENST00000413219 TSHBP01222 138 aa13.28□□□□□ -0.28
SDCBP-202ENST00000413219 LINC00315P59091 139 aa13.28□□□□□ -0.28
SDCBP-202ENST00000413219 PMVKQ15126 192 aa13.28□□□□□ -0.28
SDCBP-202ENST00000413219 ATMQ13315 3056 aa13.28□□□□□ -0.28
SDCBP-202ENST00000413219 BRI3O95415 125 aa13.28□□□□□ -0.28
SDCBP-202ENST00000413219 POLR2KP53803 58 aaKnown RBP13.28□□□□□ -0.28
SDCBP-202ENST00000413219 UNQ9165/PRO28630Q6UXU0 137 aa13.28□□□□□ -0.28
SDCBP-202ENST00000413219 TIMM17AQ99595 171 aa13.28□□□□□ -0.28
SDCBP-202ENST00000413219 GNRH2O43555 120 aa13.27□□□□□ -0.28
SDCBP-202ENST00000413219 PSMB2P49721 201 aa13.27□□□□□ -0.28
SDCBP-202ENST00000413219 NDUFA11Q86Y39 141 aa13.27□□□□□ -0.28
SDCBP-202ENST00000413219 TP53TG1Q9Y2A0 90 aa13.27□□□□□ -0.28
SDCBP-202ENST00000413219 TRBV20-1A0A075B6N2 111 aa13.27□□□□□ -0.29
SDCBP-202ENST00000413219 LOC107984156A0A0G2JMH3 177 aa13.27□□□□□ -0.29
SDCBP-202ENST00000413219 LMO4P61968 165 aa13.27□□□□□ -0.29
SDCBP-202ENST00000413219 ZFP2Q6ZN57 461 aa13.27□□□□□ -0.29
SDCBP-202ENST00000413219 ARL17AQ8IVW1 177 aa13.27□□□□□ -0.29
SDCBP-202ENST00000413219 KLHL30-AS1Q8NEE0 82 aa13.27□□□□□ -0.29
SDCBP-202ENST00000413219 VCX2Q9H322 139 aa13.27□□□□□ -0.29
SDCBP-202ENST00000413219 TTC28Q96AY4 2481 aa13.26□□□□□ -0.29
SDCBP-202ENST00000413219 VCYO14598 125 aa13.26□□□□□ -0.29
SDCBP-202ENST00000413219 H3BUA1 57 aa13.25□□□□□ -0.29
SDCBP-202ENST00000413219 SYT8Q8NBV8 401 aa13.25□□□□□ -0.29
SDCBP-202ENST00000413219 CDIP1Q9H305 208 aa13.25□□□□□ -0.29
SDCBP-202ENST00000413219 SBSPONQ8IVN8 264 aa13.25□□□□□ -0.29
SDCBP-202ENST00000413219 SLC25A29Q8N8R3 303 aa13.25□□□□□ -0.29
SDCBP-202ENST00000413219 PPDPFLQ8WWR9 84 aa13.25□□□□□ -0.29
SDCBP-202ENST00000413219 USMG5Q96IX5 58 aa13.25□□□□□ -0.29
SDCBP-202ENST00000413219 CKS1BP61024 79 aa13.24□□□□□ -0.29
SDCBP-202ENST00000413219 NFE4Q86UQ8 179 aa13.24□□□□□ -0.29
SDCBP-202ENST00000413219 TMEM219Q86XT9 240 aa13.24□□□□□ -0.29
SDCBP-202ENST00000413219 KIR2DL4Q99706 377 aa13.24□□□□□ -0.29
SDCBP-202ENST00000413219 DCHS2Q6V1P9 2916 aa13.24□□□□□ -0.29
SDCBP-202ENST00000413219 KLLNB2CW77 178 aa13.24□□□□□ -0.29
SDCBP-202ENST00000413219 TRBV12-3P01733 135 aa13.24□□□□□ -0.29
SDCBP-202ENST00000413219 IGHV3-30P01768 117 aa13.24□□□□□ -0.29
SDCBP-202ENST00000413219 IGHV3-30-5P0DP03 117 aa13.24□□□□□ -0.29
SDCBP-202ENST00000413219 DEFB1P60022 68 aa13.24□□□□□ -0.29
SDCBP-202ENST00000413219 TEN1Q86WV5 123 aa13.24□□□□□ -0.29
SDCBP-202ENST00000413219 GVINP1Q7Z2Y8 2422 aa13.23□□□□□ -0.29
SDCBP-202ENST00000413219 NBL1P41271 181 aa13.23□□□□□ -0.29
SDCBP-202ENST00000413219 SUMO4Q6EEV6 95 aa13.23□□□□□ -0.29
SDCBP-202ENST00000413219 TRBV6-5A0A0K0K1A5 114 aa13.22□□□□□ -0.29
SDCBP-202ENST00000413219 A0A1W2PPR1 153 aa13.22□□□□□ -0.29
SDCBP-202ENST00000413219 F6UB75 175 aa13.22□□□□□ -0.29
SDCBP-202ENST00000413219 ZNF876PQ49A33 203 aa13.22□□□□□ -0.29
SDCBP-202ENST00000413219 C10orf126Q8N4M7 172 aa13.22□□□□□ -0.29
SDCBP-202ENST00000413219 LINC00527Q9UJ94 153 aa13.22□□□□□ -0.29
SDCBP-202ENST00000413219 CFC1BP0CG36 223 aa13.22□□□□□ -0.29
SDCBP-202ENST00000413219 CFC1P0CG37 223 aa13.22□□□□□ -0.29
SDCBP-202ENST00000413219 CRYBA4P53673 196 aa13.22□□□□□ -0.29
SDCBP-202ENST00000413219 TRBV27A0A0K0K1C4 114 aa13.21□□□□□ -0.29
SDCBP-202ENST00000413219 RPL11P62913 178 aaKnown RBP13.21□□□□□ -0.29
SDCBP-202ENST00000413219 FOXC1Q12948 553 aa13.21□□□□□ -0.29
SDCBP-202ENST00000413219 FAM159AQ6UWV7 190 aa13.21□□□□□ -0.29
SDCBP-202ENST00000413219 ZNF418Q8TF45 676 aaPredicted RBP13.21□□□□□ -0.29
SDCBP-202ENST00000413219 LRBAP50851 2863 aa13.21□□□□□ -0.3
SDCBP-202ENST00000413219 LGALS9O00182 355 aa13.2□□□□□ -0.3
SDCBP-202ENST00000413219 TCL1BO95988 128 aa13.2□□□□□ -0.3
SDCBP-202ENST00000413219 TSPEAR-AS2P59090 65 aa13.2□□□□□ -0.3
SDCBP-202ENST00000413219 KLRB1Q12918 225 aa13.2□□□□□ -0.3
SDCBP-202ENST00000413219 AMELXQ99217 191 aa13.2□□□□□ -0.3
SDCBP-202ENST00000413219 BPESC1Q9GZL8 116 aa13.2□□□□□ -0.3
SDCBP-202ENST00000413219 RPL39P62891 51 aaKnown RBP13.2□□□□□ -0.3
SDCBP-202ENST00000413219 CARD19Q96LW7 228 aa13.2□□□□□ -0.3
SDCBP-202ENST00000413219 RHPN1-AS1Q9BWJ2 59 aa13.2□□□□□ -0.3
SDCBP-202ENST00000413219 PRO1854Q9UHT4 67 aa13.2□□□□□ -0.3
SDCBP-202ENST00000413219 TLN1Q9Y490 2541 aaKnown RBP13.19□□□□□ -0.3
SDCBP-202ENST00000413219 SDHAF1A6NFY7 115 aa13.19□□□□□ -0.3
SDCBP-202ENST00000413219 A8MWV9 139 aa13.19□□□□□ -0.3
SDCBP-202ENST00000413219 J3QQQ9 107 aa13.19□□□□□ -0.3
SDCBP-202ENST00000413219 EMP1P54849 157 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms