RNA–Protein interactions for RNA: ENST00000413186.6

SYNE1-211, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 4,860 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-211ENST00000413186 NRN1Q9NPD7 142 aa6.69□□□□□ -1.34
SYNE1-211ENST00000413186 COL27A1Q8IZC6 1860 aaPredicted RBP6.69□□□□□ -1.34
SYNE1-211ENST00000413186 DNAJC9-AS1A6NH13 148 aa6.69□□□□□ -1.34
SYNE1-211ENST00000413186 C9JQL5 133 aa6.69□□□□□ -1.34
SYNE1-211ENST00000413186 TAX1BP3O14907 124 aa6.69□□□□□ -1.34
SYNE1-211ENST00000413186 NANOS2P60321 138 aaKnown RBP6.69□□□□□ -1.34
SYNE1-211ENST00000413186 GFI1BQ5VTD9 330 aa6.69□□□□□ -1.34
SYNE1-211ENST00000413186 SPATA31B1PQ5VZV4 182 aa6.69□□□□□ -1.34
SYNE1-211ENST00000413186 LCN12Q6JVE5 192 aa6.69□□□□□ -1.34
SYNE1-211ENST00000413186 TLN2Q9Y4G6 2542 aa6.69□□□□□ -1.34
SYNE1-211ENST00000413186 FABP5P3A8MUU1 101 aa6.68□□□□□ -1.34
SYNE1-211ENST00000413186 NDPQ00604 133 aa6.68□□□□□ -1.34
SYNE1-211ENST00000413186 PSG8Q9UQ74 426 aa6.68□□□□□ -1.34
SYNE1-211ENST00000413186 MYO9AB2RTY4 2548 aa6.68□□□□□ -1.34
SYNE1-211ENST00000413186 SIVA1O15304 175 aa6.68□□□□□ -1.34
SYNE1-211ENST00000413186 C11orf52Q96A22 123 aa6.68□□□□□ -1.34
SYNE1-211ENST00000413186 HIGD1CA8MV81 97 aa6.68□□□□□ -1.34
SYNE1-211ENST00000413186 C20orf173Q96LM9 149 aa6.68□□□□□ -1.34
SYNE1-211ENST00000413186 RFNGQ9Y644 331 aa6.68□□□□□ -1.34
SYNE1-211ENST00000413186 TRAV25A0A0B4J276 109 aa6.68□□□□□ -1.34
SYNE1-211ENST00000413186 FAM231BA6NCW3 169 aa6.68□□□□□ -1.34
SYNE1-211ENST00000413186 C9JAW5 83 aa6.68□□□□□ -1.34
SYNE1-211ENST00000413186 PPBPP02775 128 aa6.68□□□□□ -1.34
SYNE1-211ENST00000413186 CXCL1P09341 107 aa6.68□□□□□ -1.34
SYNE1-211ENST00000413186 P0C879 139 aa6.68□□□□□ -1.34
SYNE1-211ENST00000413186 HTN3P15516 51 aa6.68□□□□□ -1.34
SYNE1-211ENST00000413186 MPV17L2Q567V2 206 aa6.68□□□□□ -1.34
SYNE1-211ENST00000413186 LINC00477Q96M19 166 aa6.68□□□□□ -1.34
SYNE1-211ENST00000413186 A6NED7 52 aa6.67□□□□□ -1.34
SYNE1-211ENST00000413186 DLEU1O43261 78 aa6.67□□□□□ -1.34
SYNE1-211ENST00000413186 EIF4EBP1Q13541 118 aaPredicted RBP6.67□□□□□ -1.34
SYNE1-211ENST00000413186 CT83Q5H943 113 aa6.67□□□□□ -1.34
SYNE1-211ENST00000413186 I3L2K1 104 aa6.67□□□□□ -1.34
SYNE1-211ENST00000413186 PRR20EP86478 221 aa6.67□□□□□ -1.34
SYNE1-211ENST00000413186 PRR20CP86479 221 aa6.67□□□□□ -1.34
SYNE1-211ENST00000413186 PRR20DP86480 221 aa6.67□□□□□ -1.34
SYNE1-211ENST00000413186 PRR20BP86481 221 aa6.67□□□□□ -1.34
SYNE1-211ENST00000413186 PRR20AP86496 221 aa6.67□□□□□ -1.34
SYNE1-211ENST00000413186 ZNF726P1Q15940 193 aa6.67□□□□□ -1.34
SYNE1-211ENST00000413186 AMN1Q8IY45 258 aa6.67□□□□□ -1.34
SYNE1-211ENST00000413186 DYNAPQ8N1N2 210 aa6.67□□□□□ -1.34
SYNE1-211ENST00000413186 C11orf1Q9H5F2 150 aa6.67□□□□□ -1.34
SYNE1-211ENST00000413186 K7EIM0 57 aa6.67□□□□□ -1.34
SYNE1-211ENST00000413186 LY6G6DO95868 133 aa6.67□□□□□ -1.34
SYNE1-211ENST00000413186 LINC01559Q495D7 138 aa6.67□□□□□ -1.34
SYNE1-211ENST00000413186 ACTL10Q5JWF8 245 aa6.67□□□□□ -1.34
SYNE1-211ENST00000413186 C1QTNF4Q9BXJ3 329 aa6.67□□□□□ -1.34
SYNE1-211ENST00000413186 TMEM14CQ9P0S9 112 aa6.67□□□□□ -1.34
SYNE1-211ENST00000413186 TNFRSF18Q9Y5U5 241 aa6.67□□□□□ -1.34
SYNE1-211ENST00000413186 F2Z2F3 143 aa6.67□□□□□ -1.34
SYNE1-211ENST00000413186 HSD52Q0P140 79 aa6.67□□□□□ -1.34
SYNE1-211ENST00000413186 PSG3Q16557 428 aa6.67□□□□□ -1.34
SYNE1-211ENST00000413186 GFRA4Q9GZZ7 299 aa6.67□□□□□ -1.34
SYNE1-211ENST00000413186 RNASE7Q9H1E1 156 aaKnown RBP6.67□□□□□ -1.34
SYNE1-211ENST00000413186 PRRC2CQ9Y520 2896 aaKnown RBP6.67□□□□□ -1.34
SYNE1-211ENST00000413186 IGF1P05019 195 aa6.66□□□□□ -1.34
SYNE1-211ENST00000413186 PFN1P07737 140 aaKnown RBP6.66□□□□□ -1.34
SYNE1-211ENST00000413186 MP68P56378 58 aa6.66□□□□□ -1.34
SYNE1-211ENST00000413186 HIST3H2BBQ8N257 126 aa6.66□□□□□ -1.34
SYNE1-211ENST00000413186 LINC01587Q99440 93 aa6.66□□□□□ -1.34
SYNE1-211ENST00000413186 IGHV7-4-1A0A0J9YVY3 117 aa6.66□□□□□ -1.34
SYNE1-211ENST00000413186 CCL24O00175 119 aa6.66□□□□□ -1.34
SYNE1-211ENST00000413186 ADAMTSL5Q6ZMM2 481 aa6.66□□□□□ -1.34
SYNE1-211ENST00000413186 ZNF491Q8N8L2 437 aa6.66□□□□□ -1.34
SYNE1-211ENST00000413186 FER1L6-AS1Q8NA97 138 aa6.66□□□□□ -1.34
SYNE1-211ENST00000413186 ZNF492Q9P255 531 aa6.66□□□□□ -1.34
SYNE1-211ENST00000413186 LSM4Q9Y4Z0 139 aaKnown RBP6.66□□□□□ -1.34
SYNE1-211ENST00000413186 ABCA2Q9BZC7 2435 aa6.66□□□□□ -1.34
SYNE1-211ENST00000413186 H3BRN7 92 aa6.66□□□□□ -1.34
SYNE1-211ENST00000413186 CRLF1O75462 422 aa6.66□□□□□ -1.34
SYNE1-211ENST00000413186 INAFM2P0DMQ5 153 aa6.66□□□□□ -1.34
SYNE1-211ENST00000413186 H3BMG7 143 aa6.66□□□□□ -1.34
SYNE1-211ENST00000413186 FAM231DQ6ZW35 169 aa6.66□□□□□ -1.34
SYNE1-211ENST00000413186 ORMDL3Q8N138 153 aa6.66□□□□□ -1.34
SYNE1-211ENST00000413186 ZNF664Q8N3J9 261 aa6.66□□□□□ -1.34
SYNE1-211ENST00000413186 INAFM1C9JVW0 142 aa6.65□□□□□ -1.34
SYNE1-211ENST00000413186 APOHP02749 345 aaPredicted RBP6.65□□□□□ -1.34
SYNE1-211ENST00000413186 BRWD1-AS2P59051 145 aa6.65□□□□□ -1.34
SYNE1-211ENST00000413186 EXOC3-AS1Q8N2X6 119 aa6.65□□□□□ -1.34
SYNE1-211ENST00000413186 PRADC1Q9BSG0 188 aa6.65□□□□□ -1.34
SYNE1-211ENST00000413186 LINC01549A6NIU2 74 aa6.65□□□□□ -1.34
SYNE1-211ENST00000413186 RNASE4P34096 147 aaKnown RBP6.65□□□□□ -1.34
SYNE1-211ENST00000413186 SMPXQ9UHP9 88 aa6.65□□□□□ -1.34
SYNE1-211ENST00000413186 ABCA12Q86UK0 2595 aa6.65□□□□□ -1.34
SYNE1-211ENST00000413186 AMBPP02760 352 aa6.65□□□□□ -1.35
SYNE1-211ENST00000413186 PRR15LQ9BU68 103 aa6.65□□□□□ -1.35
SYNE1-211ENST00000413186 IGHV3-64A0A075B6Q5 118 aa6.65□□□□□ -1.35
SYNE1-211ENST00000413186 MLST8Q9BVC4 326 aa6.65□□□□□ -1.35
SYNE1-211ENST00000413186 ARHGAP32A7KAX9 2087 aa6.64□□□□□ -1.35
SYNE1-211ENST00000413186 IGHG4P01861 327 aa6.64□□□□□ -1.35
SYNE1-211ENST00000413186 HIST1H2BLQ99880 126 aa6.64□□□□□ -1.35
SYNE1-211ENST00000413186 TRGV11A0A075B6L2 103 aa6.64□□□□□ -1.35
SYNE1-211ENST00000413186 TRBV19A0A075B6N1 114 aa6.64□□□□□ -1.35
SYNE1-211ENST00000413186 CRYGBP07316 175 aa6.64□□□□□ -1.35
SYNE1-211ENST00000413186 MYCNOSP40205 109 aa6.64□□□□□ -1.35
SYNE1-211ENST00000413186 ORMDL2Q53FV1 153 aa6.64□□□□□ -1.35
SYNE1-211ENST00000413186 C3orf22Q8N5N4 141 aa6.64□□□□□ -1.35
SYNE1-211ENST00000413186 GLMPQ8WWB7 406 aa6.64□□□□□ -1.35
SYNE1-211ENST00000413186 IGKV1-17P01599 117 aa6.64□□□□□ -1.35
SYNE1-211ENST00000413186 PLA2G1BP04054 148 aaKnown RBP6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms