RNA–Protein interactions for RNA: ENST00000412649.5

CLTCL1-201, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2

Gene CLTCL1, Length 4,635 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-201ENST00000412649 C3orf56Q8N813 242 aa10.73□□□□□ -0.69
CLTCL1-201ENST00000412649 PHLDA1Q8WV24 401 aaPredicted RBP10.73□□□□□ -0.69
CLTCL1-201ENST00000412649 NDUFA12Q9UI09 145 aa10.73□□□□□ -0.69
CLTCL1-201ENST00000412649 LENEPQ9Y5L5 61 aa10.73□□□□□ -0.69
CLTCL1-201ENST00000412649 ADARB2-AS1A8MUL3 147 aa10.72□□□□□ -0.69
CLTCL1-201ENST00000412649 LY6EQ16553 131 aa10.72□□□□□ -0.69
CLTCL1-201ENST00000412649 GAGE2AQ6NT46 116 aa10.72□□□□□ -0.69
CLTCL1-201ENST00000412649 TRAV41A0A0B4J266 112 aa10.72□□□□□ -0.69
CLTCL1-201ENST00000412649 ATP6V0E1O15342 81 aa10.72□□□□□ -0.69
CLTCL1-201ENST00000412649 HOXB4P17483 251 aaPredicted RBP10.72□□□□□ -0.69
CLTCL1-201ENST00000412649 SPRY4Q9C004 299 aa10.72□□□□□ -0.69
CLTCL1-201ENST00000412649 BUB3O43684 328 aa10.72□□□□□ -0.69
CLTCL1-201ENST00000412649 THBDP07204 575 aa10.72□□□□□ -0.69
CLTCL1-201ENST00000412649 MORN3Q6PF18 240 aaPredicted RBP10.71□□□□□ -0.69
CLTCL1-201ENST00000412649 IGHV3OR16-10A0A075B7F0 116 aa10.71□□□□□ -0.7
CLTCL1-201ENST00000412649 A0A0J9YY99 117 aa10.71□□□□□ -0.7
CLTCL1-201ENST00000412649 FAM236AA0A1B0GUQ0 79 aa10.71□□□□□ -0.7
CLTCL1-201ENST00000412649 FAM236BA0A1B0GV22 79 aa10.71□□□□□ -0.7
CLTCL1-201ENST00000412649 CCL21O00585 134 aa10.71□□□□□ -0.7
CLTCL1-201ENST00000412649 CREBBPQ92793 2442 aa10.71□□□□□ -0.7
CLTCL1-201ENST00000412649 ACACAQ13085 2346 aa10.7□□□□□ -0.7
CLTCL1-201ENST00000412649 GNRH2O43555 120 aa10.7□□□□□ -0.7
CLTCL1-201ENST00000412649 AGRNO00468 2067 aa10.7□□□□□ -0.7
CLTCL1-201ENST00000412649 RPL39P62891 51 aaKnown RBP10.7□□□□□ -0.7
CLTCL1-201ENST00000412649 IGFBPL1Q8WX77 278 aa10.7□□□□□ -0.7
CLTCL1-201ENST00000412649 CRYGBP07316 175 aa10.7□□□□□ -0.7
CLTCL1-201ENST00000412649 ICOSQ9Y6W8 199 aa10.7□□□□□ -0.7
CLTCL1-201ENST00000412649 G3V318 75 aa10.69□□□□□ -0.7
CLTCL1-201ENST00000412649 INAFM2P0DMQ5 153 aa10.69□□□□□ -0.7
CLTCL1-201ENST00000412649 SLC25A29Q8N8R3 303 aa10.69□□□□□ -0.7
CLTCL1-201ENST00000412649 FANCD2OSQ96PS1 177 aa10.69□□□□□ -0.7
CLTCL1-201ENST00000412649 CCDC179H3BU77 68 aa10.69□□□□□ -0.7
CLTCL1-201ENST00000412649 RHODO00212 210 aa10.69□□□□□ -0.7
CLTCL1-201ENST00000412649 ACYP1P07311 99 aa10.69□□□□□ -0.7
CLTCL1-201ENST00000412649 NPBQ8NG41 125 aa10.69□□□□□ -0.7
CLTCL1-201ENST00000412649 TEX49A0A1B0GTD5 131 aa10.69□□□□□ -0.7
CLTCL1-201ENST00000412649 H3BT86 120 aa10.69□□□□□ -0.7
CLTCL1-201ENST00000412649 I3L3M4 83 aa10.69□□□□□ -0.7
CLTCL1-201ENST00000412649 DUX3Q96PT4 197 aa10.69□□□□□ -0.7
CLTCL1-201ENST00000412649 CDIP1Q9H305 208 aa10.69□□□□□ -0.7
CLTCL1-201ENST00000412649 NFE4Q86UQ8 179 aa10.69□□□□□ -0.7
CLTCL1-201ENST00000412649 CEP192Q8TEP8 1941 aa10.69□□□□□ -0.7
CLTCL1-201ENST00000412649 TRGV11A0A075B6L2 103 aa10.68□□□□□ -0.7
CLTCL1-201ENST00000412649 TRAV4A0A0B4J268 109 aa10.68□□□□□ -0.7
CLTCL1-201ENST00000412649 LY6HO94772 140 aa10.68□□□□□ -0.7
CLTCL1-201ENST00000412649 RPL32P62910 135 aaKnown RBP10.68□□□□□ -0.7
CLTCL1-201ENST00000412649 NRACQ8N912 160 aa10.68□□□□□ -0.7
CLTCL1-201ENST00000412649 TIMM17AQ99595 171 aa10.68□□□□□ -0.7
CLTCL1-201ENST00000412649 C9orf47Q6ZRZ4 202 aa10.68□□□□□ -0.7
CLTCL1-201ENST00000412649 UBE2L6O14933 153 aa10.68□□□□□ -0.7
CLTCL1-201ENST00000412649 CNFNQ9BYD5 112 aa10.68□□□□□ -0.7
CLTCL1-201ENST00000412649 RASL10AQ92737 203 aa10.67□□□□□ -0.7
CLTCL1-201ENST00000412649 IGHV3-73A0A0B4J1V6 119 aa10.67□□□□□ -0.7
CLTCL1-201ENST00000412649 RHOHQ15669 191 aa10.67□□□□□ -0.7
CLTCL1-201ENST00000412649 SEM1Q6ZVN7 128 aa10.67□□□□□ -0.7
CLTCL1-201ENST00000412649 RIF1Q5UIP0 2472 aaKnown RBP10.67□□□□□ -0.7
CLTCL1-201ENST00000412649 TMEM219Q86XT9 240 aa10.67□□□□□ -0.7
CLTCL1-201ENST00000412649 RHPN1-AS1Q9BWJ2 59 aa10.67□□□□□ -0.7
CLTCL1-201ENST00000412649 A0A0B4J2C4 111 aa10.66□□□□□ -0.7
CLTCL1-201ENST00000412649 PIP4P2Q8N4L2 257 aa10.66□□□□□ -0.7
CLTCL1-201ENST00000412649 DSCAMO60469 2012 aa10.66□□□□□ -0.7
CLTCL1-201ENST00000412649 FAM223BA6NKX1 122 aa10.66□□□□□ -0.7
CLTCL1-201ENST00000412649 SUMO4Q6EEV6 95 aa10.66□□□□□ -0.7
CLTCL1-201ENST00000412649 FAM223AQ8IWN6 122 aa10.66□□□□□ -0.7
CLTCL1-201ENST00000412649 SPTAN1Q13813 2472 aaKnown RBP10.66□□□□□ -0.7
CLTCL1-201ENST00000412649 A0A0J9YXV3 536 aa10.66□□□□□ -0.7
CLTCL1-201ENST00000412649 CHCHD5Q9BSY4 110 aa10.66□□□□□ -0.7
CLTCL1-201ENST00000412649 DUX5Q96PT3 197 aa10.65□□□□□ -0.7
CLTCL1-201ENST00000412649 NBASA2RRP1 2371 aa10.65□□□□□ -0.7
CLTCL1-201ENST00000412649 UBE2D1P51668 147 aa10.65□□□□□ -0.7
CLTCL1-201ENST00000412649 RNASE1P07998 156 aaKnown RBP10.65□□□□□ -0.7
CLTCL1-201ENST00000412649 ZNF625Q96I27 306 aaPredicted RBP10.65□□□□□ -0.7
CLTCL1-201ENST00000412649 SPANXCQ9NY87 97 aa10.65□□□□□ -0.7
CLTCL1-201ENST00000412649 MOB4Q9Y3A3 225 aa10.65□□□□□ -0.7
CLTCL1-201ENST00000412649 TRACP01848 142 aa10.65□□□□□ -0.71
CLTCL1-201ENST00000412649 A0A1W2PNU3 283 aaPredicted RBP10.64□□□□□ -0.71
CLTCL1-201ENST00000412649 IGHV3-33P01772 117 aa10.64□□□□□ -0.71
CLTCL1-201ENST00000412649 TOMM7Q9P0U1 55 aa10.64□□□□□ -0.71
CLTCL1-201ENST00000412649 F6UB75 175 aa10.64□□□□□ -0.71
CLTCL1-201ENST00000412649 CRPP02741 224 aa10.64□□□□□ -0.71
CLTCL1-201ENST00000412649 MRPL23Q16540 153 aaKnown RBP10.64□□□□□ -0.71
CLTCL1-201ENST00000412649 IGHV3-30P01768 117 aa10.64□□□□□ -0.71
CLTCL1-201ENST00000412649 IGHV3-30-5P0DP03 117 aa10.64□□□□□ -0.71
CLTCL1-201ENST00000412649 UBE2D3P61077 147 aa10.64□□□□□ -0.71
CLTCL1-201ENST00000412649 HIST1H4AP62805 103 aaKnown RBP10.64□□□□□ -0.71
CLTCL1-201ENST00000412649 UBE2D2P62837 147 aa10.64□□□□□ -0.71
CLTCL1-201ENST00000412649 J3KT08 172 aa10.64□□□□□ -0.71
CLTCL1-201ENST00000412649 PRO0461Q9UI25 63 aa10.64□□□□□ -0.71
CLTCL1-201ENST00000412649 P0DMU3 169 aa10.63□□□□□ -0.71
CLTCL1-201ENST00000412649 FAM231AP0DMU4 169 aa10.63□□□□□ -0.71
CLTCL1-201ENST00000412649 FAM231CP0DMU5 169 aa10.63□□□□□ -0.71
CLTCL1-201ENST00000412649 IGHV7-81A0A0B4J1V7 117 aa10.63□□□□□ -0.71
CLTCL1-201ENST00000412649 PRIMA1Q86XR5 153 aa10.63□□□□□ -0.71
CLTCL1-201ENST00000412649 CLEC2BQ92478 149 aa10.63□□□□□ -0.71
CLTCL1-201ENST00000412649 IGKV3OR2-268A0A0C4DH90 116 aa10.63□□□□□ -0.71
CLTCL1-201ENST00000412649 GATA3P23771 443 aa10.63□□□□□ -0.71
CLTCL1-201ENST00000412649 SMAD5-AS1Q9Y6J3 95 aa10.62□□□□□ -0.71
CLTCL1-201ENST00000412649 MRPS12O15235 138 aaKnown RBP10.62□□□□□ -0.71
CLTCL1-201ENST00000412649 MED14OSP0DP75 135 aa10.62□□□□□ -0.71
CLTCL1-201ENST00000412649 SAA4P35542 130 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms