RNA–Protein interactions for RNA: ENST00000410299.1

RNU2-54P-201, Transcript of RNA, U2 small nuclear 54, pseudogene, humanhuman

BASIC

Gene RNU2-54P, Length 190 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-54P-201ENST00000410299 SPTBN1Q01082 2364 aaKnown RBP-0.57□□□□□ -2.5
RNU2-54P-201ENST00000410299 MYH2Q9UKX2 1941 aa-0.57□□□□□ -2.5
RNU2-54P-201ENST00000410299 A0A087WTM6 91 aa-0.57□□□□□ -2.5
RNU2-54P-201ENST00000410299 IGHV1-24A0A0C4DH33 117 aa-0.57□□□□□ -2.5
RNU2-54P-201ENST00000410299 A0A0D9SFI3 127 aa-0.57□□□□□ -2.5
RNU2-54P-201ENST00000410299 TRBV7-6A0A0J9YX20 115 aa-0.57□□□□□ -2.5
RNU2-54P-201ENST00000410299 CXorf51AA0A1B0GTR3 108 aa-0.57□□□□□ -2.5
RNU2-54P-201ENST00000410299 ZNF815PA8K554 130 aa-0.57□□□□□ -2.5
RNU2-54P-201ENST00000410299 CKS2P33552 79 aa-0.57□□□□□ -2.5
RNU2-54P-201ENST00000410299 TAS2R41P59536 307 aa-0.57□□□□□ -2.5
RNU2-54P-201ENST00000410299 SPAG11BQ08648 103 aa-0.57□□□□□ -2.5
RNU2-54P-201ENST00000410299 FADDQ13158 208 aa-0.57□□□□□ -2.5
RNU2-54P-201ENST00000410299 TMED2Q15363 201 aa-0.57□□□□□ -2.5
RNU2-54P-201ENST00000410299 Q6ZRX8 168 aa-0.57□□□□□ -2.5
RNU2-54P-201ENST00000410299 SSBP3-AS1Q7Z2R9 100 aa-0.57□□□□□ -2.5
RNU2-54P-201ENST00000410299 LINC00305Q7Z4B0 112 aa-0.57□□□□□ -2.5
RNU2-54P-201ENST00000410299 UBE2DNLQ8IWF7 75 aa-0.57□□□□□ -2.5
RNU2-54P-201ENST00000410299 CEP19Q96LK0 163 aa-0.57□□□□□ -2.5
RNU2-54P-201ENST00000410299 MED11Q9P086 117 aa-0.57□□□□□ -2.5
RNU2-54P-201ENST00000410299 PRO0255Q9UI72 69 aa-0.57□□□□□ -2.5
RNU2-54P-201ENST00000410299 YTHDC2Q9H6S0 1430 aaKnown RBP-0.57□□□□□ -2.5
RNU2-54P-201ENST00000410299 FAT2Q9NYQ8 4349 aa-0.57□□□□□ -2.5
RNU2-54P-201ENST00000410299 NUP210Q8TEM1 1887 aaPredicted RBP-0.58□□□□□ -2.5
RNU2-54P-201ENST00000410299 EP300Q09472 2414 aaPredicted RBP-0.58□□□□□ -2.5
RNU2-54P-201ENST00000410299 ZNF142P52746 1687 aaPredicted RBP-0.58□□□□□ -2.5
RNU2-54P-201ENST00000410299 TRAV13-1A0A0B4J241 112 aa-0.58□□□□□ -2.5
RNU2-54P-201ENST00000410299 PNMA8CA0A1B0GUJ8 204 aa-0.58□□□□□ -2.5
RNU2-54P-201ENST00000410299 TCRBV3S1A0A5B6 114 aa-0.58□□□□□ -2.5
RNU2-54P-201ENST00000410299 MAP1LC3B2A6NCE7 125 aa-0.58□□□□□ -2.5
RNU2-54P-201ENST00000410299 TMEM14DPA8MWL7 114 aa-0.58□□□□□ -2.5
RNU2-54P-201ENST00000410299 H3BMG7 143 aa-0.58□□□□□ -2.5
RNU2-54P-201ENST00000410299 SPINK8P0C7L1 97 aa-0.58□□□□□ -2.5
RNU2-54P-201ENST00000410299 HSD11B1P28845 292 aa-0.58□□□□□ -2.5
RNU2-54P-201ENST00000410299 GCHFRP30047 84 aa-0.58□□□□□ -2.5
RNU2-54P-201ENST00000410299 SPRR1AP35321 89 aa-0.58□□□□□ -2.5
RNU2-54P-201ENST00000410299 GNG3P63215 75 aa-0.58□□□□□ -2.5
RNU2-54P-201ENST00000410299 MRPS25P82663 173 aaKnown RBP-0.58□□□□□ -2.5
RNU2-54P-201ENST00000410299 SSBP1Q04837 148 aaKnown RBP-0.58□□□□□ -2.5
RNU2-54P-201ENST00000410299 INSL4Q14641 139 aa-0.58□□□□□ -2.5
RNU2-54P-201ENST00000410299 OTOSQ8NHW6 89 aa-0.58□□□□□ -2.5
RNU2-54P-201ENST00000410299 Q96NJ1 140 aa-0.58□□□□□ -2.5
RNU2-54P-201ENST00000410299 LXNQ9BS40 222 aa-0.58□□□□□ -2.5
RNU2-54P-201ENST00000410299 LAMTOR2Q9Y2Q5 125 aa-0.58□□□□□ -2.5
RNU2-54P-201ENST00000410299 ZCCHC11Q5TAX3 1644 aaKnown RBP-0.58□□□□□ -2.5
RNU2-54P-201ENST00000410299 ATRQ13535 2644 aa-0.58□□□□□ -2.5
RNU2-54P-201ENST00000410299 SPTA1P02549 2419 aa-0.58□□□□□ -2.5
RNU2-54P-201ENST00000410299 CSPG4Q6UVK1 2322 aa-0.59□□□□□ -2.5
RNU2-54P-201ENST00000410299 ARAP1Q96P48 1450 aa-0.59□□□□□ -2.5
RNU2-54P-201ENST00000410299 DOCK11Q5JSL3 2073 aa-0.59□□□□□ -2.5
RNU2-54P-201ENST00000410299 TRBV7-1A0A0A6YYK4 115 aa-0.59□□□□□ -2.5
RNU2-54P-201ENST00000410299 TRAV2A0A0B4J234 112 aa-0.59□□□□□ -2.5
RNU2-54P-201ENST00000410299 HBDP02042 147 aa-0.59□□□□□ -2.5
RNU2-54P-201ENST00000410299 ACYP2P14621 99 aa-0.59□□□□□ -2.5
RNU2-54P-201ENST00000410299 CCL3L1P16619 93 aa-0.59□□□□□ -2.5
RNU2-54P-201ENST00000410299 CRYGSP22914 178 aa-0.59□□□□□ -2.5
RNU2-54P-201ENST00000410299 S100A11P31949 105 aa-0.59□□□□□ -2.5
RNU2-54P-201ENST00000410299 TCTAP57738 103 aa-0.59□□□□□ -2.5
RNU2-54P-201ENST00000410299 KRTAP19-8Q3LI54 63 aa-0.59□□□□□ -2.5
RNU2-54P-201ENST00000410299 OR2T2Q6IF00 324 aa-0.59□□□□□ -2.5
RNU2-54P-201ENST00000410299 SLC48A1Q6P1K1 146 aa-0.59□□□□□ -2.5
RNU2-54P-201ENST00000410299 CYP2G1PQ6ZSU1 146 aa-0.59□□□□□ -2.5
RNU2-54P-201ENST00000410299 NDUFA11Q86Y39 141 aa-0.59□□□□□ -2.5
RNU2-54P-201ENST00000410299 Q8IZM0 81 aa-0.59□□□□□ -2.5
RNU2-54P-201ENST00000410299 C4orf33Q8N1A6 199 aa-0.59□□□□□ -2.5
RNU2-54P-201ENST00000410299 FAM24BQ8N5W8 94 aa-0.59□□□□□ -2.5
RNU2-54P-201ENST00000410299 TEX29Q8N6K0 151 aa-0.59□□□□□ -2.5
RNU2-54P-201ENST00000410299 DYDC1Q8WWB3 177 aa-0.59□□□□□ -2.5
RNU2-54P-201ENST00000410299 BATF3Q9NR55 127 aa-0.59□□□□□ -2.5
RNU2-54P-201ENST00000410299 NEBP20929 6669 aa-0.59□□□□□ -2.5
RNU2-54P-201ENST00000410299 MYH1P12882 1939 aa-0.6□□□□□ -2.5
RNU2-54P-201ENST00000410299 PLXNA1Q9UIW2 1896 aa-0.6□□□□□ -2.51
RNU2-54P-201ENST00000410299 UQCRQO14949 82 aa-0.6□□□□□ -2.51
RNU2-54P-201ENST00000410299 AKR1D1P51857 326 aa-0.6□□□□□ -2.51
RNU2-54P-201ENST00000410299 BASP1P80723 227 aaKnown RBP-0.6□□□□□ -2.51
RNU2-54P-201ENST00000410299 MRPS15P82914 257 aaKnown RBP-0.6□□□□□ -2.51
RNU2-54P-201ENST00000410299 PLGLB1Q02325 96 aa-0.6□□□□□ -2.51
RNU2-54P-201ENST00000410299 OR8B8Q15620 311 aa-0.6□□□□□ -2.51
RNU2-54P-201ENST00000410299 FAM74A4Q5TZK3 123 aa-0.6□□□□□ -2.51
RNU2-54P-201ENST00000410299 TMED4Q7Z7H5 227 aa-0.6□□□□□ -2.51
RNU2-54P-201ENST00000410299 STX19Q8N4C7 294 aa-0.6□□□□□ -2.51
RNU2-54P-201ENST00000410299 SMIM20Q8N5G0 67 aa-0.6□□□□□ -2.51
RNU2-54P-201ENST00000410299 TAS2R8Q9NYW2 309 aa-0.6□□□□□ -2.51
RNU2-54P-201ENST00000410299 SCP2D1Q9UJQ7 156 aa-0.6□□□□□ -2.51
RNU2-54P-201ENST00000410299 NDUFAF1Q9Y375 327 aa-0.6□□□□□ -2.51
RNU2-54P-201ENST00000410299 TGP01266 2768 aa-0.6□□□□□ -2.51
RNU2-54P-201ENST00000410299 EIF3AQ14152 1382 aaKnown RBP-0.6□□□□□ -2.51
RNU2-54P-201ENST00000410299 CHD8Q9HCK8 2581 aa-0.6□□□□□ -2.51
RNU2-54P-201ENST00000410299 GVINP1Q7Z2Y8 2422 aa-0.6□□□□□ -2.51
RNU2-54P-201ENST00000410299 A2MP01023 1474 aa-0.61□□□□□ -2.51
RNU2-54P-201ENST00000410299 GOLGA3Q08378 1498 aa-0.61□□□□□ -2.51
RNU2-54P-201ENST00000410299 PLXNA2O75051 1894 aa-0.61□□□□□ -2.51
RNU2-54P-201ENST00000410299 CCDC171Q6TFL3 1326 aa-0.61□□□□□ -2.51
RNU2-54P-201ENST00000410299 MYH9P35579 1960 aaKnown RBP-0.61□□□□□ -2.51
RNU2-54P-201ENST00000410299 KMT2CQ8NEZ4 4911 aaKnown RBP-0.61□□□□□ -2.51
RNU2-54P-201ENST00000410299 AKAP11Q9UKA4 1901 aa-0.61□□□□□ -2.51
RNU2-54P-201ENST00000410299 TRAV22A0A0B4J277 110 aa-0.61□□□□□ -2.51
RNU2-54P-201ENST00000410299 TRBV10-3A0A0K0K1G6 114 aa-0.61□□□□□ -2.51
RNU2-54P-201ENST00000410299 LOC107984640A0A0U1RRK4 108 aa-0.61□□□□□ -2.51
RNU2-54P-201ENST00000410299 TFF1P04155 84 aa-0.61□□□□□ -2.51
RNU2-54P-201ENST00000410299 PCBD1P61457 104 aa-0.61□□□□□ -2.51
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms