RNA–Protein interactions for RNA: ENST00000409987.5

LSM5-206, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5 BASIC

Gene LSM5, Length 504 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-206ENST00000409987 HMSDA8MTL9 139 aa2.69□□□□□ -1.98
LSM5-206ENST00000409987 J3QR89 54 aa2.69□□□□□ -1.98
LSM5-206ENST00000409987 APOC1P02654 83 aa2.69□□□□□ -1.98
LSM5-206ENST00000409987 MT-ND6P03923 174 aa2.69□□□□□ -1.98
LSM5-206ENST00000409987 HINT1P49773 126 aaPredicted RBP2.69□□□□□ -1.98
LSM5-206ENST00000409987 KRTAP10-10P60014 251 aa2.69□□□□□ -1.98
LSM5-206ENST00000409987 ERHP84090 104 aaKnown RBP2.69□□□□□ -1.98
LSM5-206ENST00000409987 KLRD1Q13241 179 aa2.69□□□□□ -1.98
LSM5-206ENST00000409987 TAF9Q16594 264 aa2.69□□□□□ -1.98
LSM5-206ENST00000409987 LYPD1Q8N2G4 141 aa2.69□□□□□ -1.98
LSM5-206ENST00000409987 TAS2R4Q9NYW5 299 aa2.69□□□□□ -1.98
LSM5-206ENST00000409987 ERG28Q9UKR5 140 aa2.69□□□□□ -1.98
LSM5-206ENST00000409987 SHROOM3Q8TF72 1996 aa2.69□□□□□ -1.98
LSM5-206ENST00000409987 TACC2O95359 2948 aa2.69□□□□□ -1.98
LSM5-206ENST00000409987 LCTP09848 1927 aa2.68□□□□□ -1.98
LSM5-206ENST00000409987 F5P12259 2224 aa2.68□□□□□ -1.98
LSM5-206ENST00000409987 IGLV10-54A0A075B6I4 117 aa2.68□□□□□ -1.98
LSM5-206ENST00000409987 TMSB15BA0A087X1C1 80 aa2.68□□□□□ -1.98
LSM5-206ENST00000409987 IGLV6-57P01721 117 aa2.68□□□□□ -1.98
LSM5-206ENST00000409987 PMP2P02689 132 aa2.68□□□□□ -1.98
LSM5-206ENST00000409987 TSPAN19P0C672 248 aa2.68□□□□□ -1.98
LSM5-206ENST00000409987 CRYGSP22914 178 aa2.68□□□□□ -1.98
LSM5-206ENST00000409987 KDELR1P24390 212 aa2.68□□□□□ -1.98
LSM5-206ENST00000409987 NCS1P62166 190 aa2.68□□□□□ -1.98
LSM5-206ENST00000409987 ZNF345Q14585 488 aa2.68□□□□□ -1.98
LSM5-206ENST00000409987 ESRGQ1W209 222 aa2.68□□□□□ -1.98
LSM5-206ENST00000409987 FAM216BQ8N7L0 139 aa2.68□□□□□ -1.98
LSM5-206ENST00000409987 OR4B1Q8NGF8 309 aa2.68□□□□□ -1.98
LSM5-206ENST00000409987 OR4X2Q8NGF9 303 aa2.68□□□□□ -1.98
LSM5-206ENST00000409987 OR8B3Q8NGG8 313 aa2.68□□□□□ -1.98
LSM5-206ENST00000409987 OR4C6Q8NH72 309 aa2.68□□□□□ -1.98
LSM5-206ENST00000409987 DIRC1Q969H9 104 aa2.68□□□□□ -1.98
LSM5-206ENST00000409987 TP53RKQ96S44 253 aa2.68□□□□□ -1.98
LSM5-206ENST00000409987 C2orf88Q9BSF0 95 aa2.68□□□□□ -1.98
LSM5-206ENST00000409987 TAF9BQ9HBM6 251 aa2.68□□□□□ -1.98
LSM5-206ENST00000409987 CCL26Q9Y258 94 aa2.68□□□□□ -1.98
LSM5-206ENST00000409987 SPTBN1Q01082 2364 aaKnown RBP2.68□□□□□ -1.98
LSM5-206ENST00000409987 DSPPQ9NZW4 1301 aa2.68□□□□□ -1.98
LSM5-206ENST00000409987 F8P00451 2351 aa2.67□□□□□ -1.98
LSM5-206ENST00000409987 DLEU1O43261 78 aa2.67□□□□□ -1.98
LSM5-206ENST00000409987 FOXA3P55318 350 aaPredicted RBP2.67□□□□□ -1.98
LSM5-206ENST00000409987 RPS25P62851 125 aaKnown RBP2.67□□□□□ -1.98
LSM5-206ENST00000409987 SELENOWP63302 87 aa2.67□□□□□ -1.98
LSM5-206ENST00000409987 SPANXN5Q5MJ07 72 aa2.67□□□□□ -1.98
LSM5-206ENST00000409987 ZNF826PQ6ZT77 177 aa2.67□□□□□ -1.98
LSM5-206ENST00000409987 MMGT1Q8N4V1 131 aa2.67□□□□□ -1.98
LSM5-206ENST00000409987 MORN4Q8NDC4 146 aa2.67□□□□□ -1.98
LSM5-206ENST00000409987 DEFB124Q8NES8 71 aa2.67□□□□□ -1.98
LSM5-206ENST00000409987 CHCHD1Q96BP2 118 aaKnown RBP2.67□□□□□ -1.98
LSM5-206ENST00000409987 LPAR5Q9H1C0 372 aa2.67□□□□□ -1.98
LSM5-206ENST00000409987 PRO2289Q9P1D8 64 aa2.67□□□□□ -1.98
LSM5-206ENST00000409987 DENND4CQ5VZ89 1909 aa2.67□□□□□ -1.98
LSM5-206ENST00000409987 MCM3APO60318 1980 aa2.67□□□□□ -1.98
LSM5-206ENST00000409987 ANKHD1Q8IWZ3 2542 aaKnown RBP2.67□□□□□ -1.98
LSM5-206ENST00000409987 FBN1P35555 2871 aaKnown RBP2.67□□□□□ -1.98
LSM5-206ENST00000409987 PLXNB1O43157 2135 aa2.66□□□□□ -1.98
LSM5-206ENST00000409987 APCP25054 2843 aa2.66□□□□□ -1.98
LSM5-206ENST00000409987 IGKV1D-42A0A075B6H8 117 aa2.66□□□□□ -1.98
LSM5-206ENST00000409987 IGKV1D-17A0A075B6S4 117 aa2.66□□□□□ -1.98
LSM5-206ENST00000409987 SPAARA0A1B0GVQ0 90 aa2.66□□□□□ -1.98
LSM5-206ENST00000409987 MIF4GDA9UHW6 222 aaKnown RBP2.66□□□□□ -1.98
LSM5-206ENST00000409987 OR1I1O60431 355 aa2.66□□□□□ -1.98
LSM5-206ENST00000409987 IGKV1-17P01599 117 aa2.66□□□□□ -1.98
LSM5-206ENST00000409987 RRAS2P62070 204 aaPredicted RBP2.66□□□□□ -1.98
LSM5-206ENST00000409987 MRPS36P82909 103 aaKnown RBP2.66□□□□□ -1.98
LSM5-206ENST00000409987 QRFPP83859 136 aa2.66□□□□□ -1.98
LSM5-206ENST00000409987 TMEM155Q4W5P6 130 aa2.66□□□□□ -1.98
LSM5-206ENST00000409987 HSD17B12Q53GQ0 312 aa2.66□□□□□ -1.98
LSM5-206ENST00000409987 Q8IYB0 196 aa2.66□□□□□ -1.98
LSM5-206ENST00000409987 NIT2Q9NQR4 276 aa2.66□□□□□ -1.98
LSM5-206ENST00000409987 ASCC3Q8N3C0 2202 aaKnown RBP2.66□□□□□ -1.98
LSM5-206ENST00000409987 NYNRINQ9P2P1 1898 aaKnown RBP2.66□□□□□ -1.98
LSM5-206ENST00000409987 VPS13CQ709C8 3753 aa2.66□□□□□ -1.98
LSM5-206ENST00000409987 ATRQ13535 2644 aa2.66□□□□□ -1.98
LSM5-206ENST00000409987 GREB1Q4ZG55 1949 aa2.66□□□□□ -1.98
LSM5-206ENST00000409987 PATJQ8NI35 1801 aa2.65□□□□□ -1.98
LSM5-206ENST00000409987 DOCK4Q8N1I0 1966 aa2.65□□□□□ -1.98
LSM5-206ENST00000409987 TRAV3A0A0B4J244 114 aa2.65□□□□□ -1.99
LSM5-206ENST00000409987 A0A1W2PNN7 141 aa2.65□□□□□ -1.99
LSM5-206ENST00000409987 UQCRQO14949 82 aa2.65□□□□□ -1.99
LSM5-206ENST00000409987 SMIM24O75264 130 aa2.65□□□□□ -1.99
LSM5-206ENST00000409987 IGLC6P0CF74 106 aa2.65□□□□□ -1.99
LSM5-206ENST00000409987 MGST1P10620 155 aaKnown RBP2.65□□□□□ -1.99
LSM5-206ENST00000409987 PEBP1P30086 187 aaKnown RBP2.65□□□□□ -1.99
LSM5-206ENST00000409987 RAB5CP51148 216 aa2.65□□□□□ -1.99
LSM5-206ENST00000409987 CDK5R1Q15078 307 aa2.65□□□□□ -1.99
LSM5-206ENST00000409987 LINC00471Q8N535 108 aa2.65□□□□□ -1.99
LSM5-206ENST00000409987 RETNLBQ9BQ08 111 aa2.65□□□□□ -1.99
LSM5-206ENST00000409987 CXCL16Q9H2A7 254 aa2.65□□□□□ -1.99
LSM5-206ENST00000409987 BANF2Q9H503 90 aa2.65□□□□□ -1.99
LSM5-206ENST00000409987 TNFSF18Q9UNG2 199 aa2.65□□□□□ -1.99
LSM5-206ENST00000409987 LY96Q9Y6Y9 160 aa2.65□□□□□ -1.99
LSM5-206ENST00000409987 KNTC1P50748 2209 aa2.65□□□□□ -1.99
LSM5-206ENST00000409987 PKD1L1Q8TDX9 2849 aa2.64□□□□□ -1.99
LSM5-206ENST00000409987 MYH13Q9UKX3 1938 aa2.64□□□□□ -1.99
LSM5-206ENST00000409987 FN1P02751 2386 aaKnown RBP2.64□□□□□ -1.99
LSM5-206ENST00000409987 PARP14Q460N5 1801 aa2.64□□□□□ -1.99
LSM5-206ENST00000409987 IGKV2-24A0A0C4DH68 120 aa2.64□□□□□ -1.99
LSM5-206ENST00000409987 OR2T8A6NH00 312 aa2.64□□□□□ -1.99
LSM5-206ENST00000409987 FNDC10F2Z333 226 aa2.64□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms