RNA–Protein interactions for RNA: ENST00000409323.1

CHRNA1-204, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA1, Length 1,585 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-204ENST00000409323 RAB5AP20339 215 aa10.09□□□□□ -0.79
CHRNA1-204ENST00000409323 ASIPP42127 132 aa10.09□□□□□ -0.79
CHRNA1-204ENST00000409323 TRAV9-1A0A075B6T8 112 aa10.08□□□□□ -0.8
CHRNA1-204ENST00000409323 CXCL1P09341 107 aa10.08□□□□□ -0.8
CHRNA1-204ENST00000409323 ARMS2P0C7Q2 107 aa10.08□□□□□ -0.8
CHRNA1-204ENST00000409323 DEFB130BP0DP73 79 aa10.08□□□□□ -0.8
CHRNA1-204ENST00000409323 DEFB130AP0DP74 79 aa10.08□□□□□ -0.8
CHRNA1-204ENST00000409323 TCL1AP56279 114 aa10.08□□□□□ -0.8
CHRNA1-204ENST00000409323 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.08□□□□□ -0.8
CHRNA1-204ENST00000409323 TRGV1A0A0A0MS02 117 aa10.07□□□□□ -0.8
CHRNA1-204ENST00000409323 GAGE12BA1L429 117 aa10.07□□□□□ -0.8
CHRNA1-204ENST00000409323 GAGE7O76087 117 aa10.07□□□□□ -0.8
CHRNA1-204ENST00000409323 GAGE12FP0CL80 117 aa10.07□□□□□ -0.8
CHRNA1-204ENST00000409323 GAGE12GP0CL81 117 aa10.07□□□□□ -0.8
CHRNA1-204ENST00000409323 GAGE12IP0CL82 117 aa10.07□□□□□ -0.8
CHRNA1-204ENST00000409323 CT83Q5H943 113 aa10.07□□□□□ -0.8
CHRNA1-204ENST00000409323 ZNF493Q6ZR52 646 aa10.07□□□□□ -0.8
CHRNA1-204ENST00000409323 Q6ZTI0 123 aa10.07□□□□□ -0.8
CHRNA1-204ENST00000409323 IL36BQ9NZH7 164 aa10.07□□□□□ -0.8
CHRNA1-204ENST00000409323 NANOS2P60321 138 aaKnown RBP10.06□□□□□ -0.8
CHRNA1-204ENST00000409323 IL17DQ8TAD2 202 aa10.06□□□□□ -0.8
CHRNA1-204ENST00000409323 BTF3L4Q96K17 158 aa10.06□□□□□ -0.8
CHRNA1-204ENST00000409323 C9orf85Q96MD7 179 aa10.06□□□□□ -0.8
CHRNA1-204ENST00000409323 C11orf68Q9H3H3 251 aaKnown RBP10.06□□□□□ -0.8
CHRNA1-204ENST00000409323 DKK2Q9UBU2 259 aa10.06□□□□□ -0.8
CHRNA1-204ENST00000409323 URGCP-MRPS24S4R325 110 aa10.06□□□□□ -0.8
CHRNA1-204ENST00000409323 TGP01266 2768 aa10.06□□□□□ -0.8
CHRNA1-204ENST00000409323 TGIF2-C20orf24A0A0A6YYL0 155 aa10.05□□□□□ -0.8
CHRNA1-204ENST00000409323 SMIM27A0A1W2PRY6 76 aa10.05□□□□□ -0.8
CHRNA1-204ENST00000409323 S100PP25815 95 aa10.05□□□□□ -0.8
CHRNA1-204ENST00000409323 OR10AG1Q8NH19 301 aa10.05□□□□□ -0.8
CHRNA1-204ENST00000409323 GTSF1Q8WW33 167 aa10.05□□□□□ -0.8
CHRNA1-204ENST00000409323 FAM210BQ96KR6 192 aa10.05□□□□□ -0.8
CHRNA1-204ENST00000409323 M0R381 172 aa10.05□□□□□ -0.8
CHRNA1-204ENST00000409323 KCNIP4Q6PIL6 250 aa10.05□□□□□ -0.8
CHRNA1-204ENST00000409323 FER1L6-AS1Q8NA97 138 aa10.05□□□□□ -0.8
CHRNA1-204ENST00000409323 EDA2RQ9HAV5 297 aa10.05□□□□□ -0.8
CHRNA1-204ENST00000409323 FAM231BA6NCW3 169 aa10.04□□□□□ -0.8
CHRNA1-204ENST00000409323 IGHV3-53P01767 116 aa10.04□□□□□ -0.8
CHRNA1-204ENST00000409323 SPART-AS1P0CW21 52 aa10.04□□□□□ -0.8
CHRNA1-204ENST00000409323 FOXA3P55318 350 aaPredicted RBP10.04□□□□□ -0.8
CHRNA1-204ENST00000409323 DMRTA1Q5VZB9 504 aa10.04□□□□□ -0.8
CHRNA1-204ENST00000409323 LYZL1Q6UWQ5 148 aa10.04□□□□□ -0.8
CHRNA1-204ENST00000409323 C11orf45Q8TAV5 145 aa10.04□□□□□ -0.8
CHRNA1-204ENST00000409323 PGLYRP4Q96LB8 373 aa10.04□□□□□ -0.8
CHRNA1-204ENST00000409323 JPT2Q9H910 190 aa10.04□□□□□ -0.8
CHRNA1-204ENST00000409323 PHLDA3Q9Y5J5 127 aa10.04□□□□□ -0.8
CHRNA1-204ENST00000409323 STAB2Q8WWQ8 2551 aa10.03□□□□□ -0.8
CHRNA1-204ENST00000409323 XKRY2A2RUG3 117 aa10.03□□□□□ -0.8
CHRNA1-204ENST00000409323 M0R2P5 195 aa10.03□□□□□ -0.8
CHRNA1-204ENST00000409323 PHOX2AO14813 284 aa10.03□□□□□ -0.8
CHRNA1-204ENST00000409323 SPINK4O60575 86 aa10.03□□□□□ -0.8
CHRNA1-204ENST00000409323 IGLC6P0CF74 106 aa10.03□□□□□ -0.8
CHRNA1-204ENST00000409323 HTN3P15516 51 aa10.03□□□□□ -0.8
CHRNA1-204ENST00000409323 FAM3BP58499 235 aaPredicted RBP10.03□□□□□ -0.8
CHRNA1-204ENST00000409323 RPS20P60866 119 aaKnown RBP10.03□□□□□ -0.8
CHRNA1-204ENST00000409323 DAD1P61803 113 aa10.03□□□□□ -0.8
CHRNA1-204ENST00000409323 DAZ2Q13117 558 aaKnown RBP10.03□□□□□ -0.8
CHRNA1-204ENST00000409323 C12orf74Q32Q52 190 aa10.03□□□□□ -0.8
CHRNA1-204ENST00000409323 ZNF876PQ49A33 203 aa10.03□□□□□ -0.8
CHRNA1-204ENST00000409323 GFRA4Q9GZZ7 299 aa10.03□□□□□ -0.8
CHRNA1-204ENST00000409323 A8MWL6 223 aa10.02□□□□□ -0.81
CHRNA1-204ENST00000409323 Q6ZTC4 211 aa10.02□□□□□ -0.81
CHRNA1-204ENST00000409323 TSKUQ8WUA8 353 aa10.02□□□□□ -0.81
CHRNA1-204ENST00000409323 MSRB1Q9NZV6 116 aa10.02□□□□□ -0.81
CHRNA1-204ENST00000409323 NACAE9PAV3 2078 aa10.02□□□□□ -0.81
CHRNA1-204ENST00000409323 TRGV2A0A075B6R0 118 aa10.01□□□□□ -0.81
CHRNA1-204ENST00000409323 HIGD1CA8MV81 97 aa10.01□□□□□ -0.81
CHRNA1-204ENST00000409323 DNLZQ5SXM8 178 aa10.01□□□□□ -0.81
CHRNA1-204ENST00000409323 SPXQ9BT56 116 aa10.01□□□□□ -0.81
CHRNA1-204ENST00000409323 SCRT2Q9NQ03 307 aa10.01□□□□□ -0.81
CHRNA1-204ENST00000409323 IGHV3-73A0A0B4J1V6 119 aa10.01□□□□□ -0.81
CHRNA1-204ENST00000409323 LYRM9A8MSI8 78 aa10.01□□□□□ -0.81
CHRNA1-204ENST00000409323 SNAI2O43623 268 aa10.01□□□□□ -0.81
CHRNA1-204ENST00000409323 SPANXN1Q5VSR9 72 aa10.01□□□□□ -0.81
CHRNA1-204ENST00000409323 A0A1W2PPQ1 181 aa10□□□□□ -0.81
CHRNA1-204ENST00000409323 OR5AL1P0C617 328 aa10□□□□□ -0.81
CHRNA1-204ENST00000409323 SSBP4Q9BWG4 385 aaPredicted RBP10□□□□□ -0.81
CHRNA1-204ENST00000409323 SAMD10Q9BYL1 202 aa10□□□□□ -0.81
CHRNA1-204ENST00000409323 TMA7Q9Y2S6 64 aaKnown RBP10□□□□□ -0.81
CHRNA1-204ENST00000409323 A0A087WWL8 130 aa9.99□□□□□ -0.81
CHRNA1-204ENST00000409323 RPS10P46783 165 aaKnown RBP9.99□□□□□ -0.81
CHRNA1-204ENST00000409323 RASL11AQ6T310 242 aa9.99□□□□□ -0.81
CHRNA1-204ENST00000409323 POM121L12Q8N7R1 296 aa9.99□□□□□ -0.81
CHRNA1-204ENST00000409323 NUP35Q8NFH5 326 aa9.99□□□□□ -0.81
CHRNA1-204ENST00000409323 RASL10AQ92737 203 aa9.99□□□□□ -0.81
CHRNA1-204ENST00000409323 C1orf196B1AJZ1 125 aa9.98□□□□□ -0.81
CHRNA1-204ENST00000409323 MED14OSP0DP75 135 aa9.98□□□□□ -0.81
CHRNA1-204ENST00000409323 NTF3P20783 257 aa9.98□□□□□ -0.81
CHRNA1-204ENST00000409323 CTRLP40313 264 aa9.98□□□□□ -0.81
CHRNA1-204ENST00000409323 LGALS9BQ3B8N2 356 aa9.98□□□□□ -0.81
CHRNA1-204ENST00000409323 FAM74A4Q5TZK3 123 aa9.98□□□□□ -0.81
CHRNA1-204ENST00000409323 ZFP82Q8N141 532 aa9.98□□□□□ -0.81
CHRNA1-204ENST00000409323 LINC00612Q8N6U2 182 aa9.98□□□□□ -0.81
CHRNA1-204ENST00000409323 ZNF479Q96JC4 524 aa9.98□□□□□ -0.81
CHRNA1-204ENST00000409323 NAT8BQ9UHF3 227 aa9.98□□□□□ -0.81
CHRNA1-204ENST00000409323 TWIST1Q15672 202 aa9.97□□□□□ -0.81
CHRNA1-204ENST00000409323 COX19Q49B96 90 aa9.97□□□□□ -0.81
CHRNA1-204ENST00000409323 SYT8Q8NBV8 401 aa9.97□□□□□ -0.81
CHRNA1-204ENST00000409323 TRGC2P03986 189 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms