RNA–Protein interactions for RNA: ENST00000409236.6

AFF3-202, Transcript of AF4/FMR2 family member 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene AFF3, Length 9,849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF3-202ENST00000409236 LINC01356Q8N9X3 169 aa11.07□□□□□ -0.64
AFF3-202ENST00000409236 XCL2Q9UBD3 114 aa11.07□□□□□ -0.64
AFF3-202ENST00000409236 DEFB131AP59861 70 aa11.07□□□□□ -0.64
AFF3-202ENST00000409236 C9orf106Q8NAJ2 232 aa11.07□□□□□ -0.64
AFF3-202ENST00000409236 IGHV4-4A0A075B6R2 117 aa11.06□□□□□ -0.64
AFF3-202ENST00000409236 NDUFA4L2Q9NRX3 87 aa11.06□□□□□ -0.64
AFF3-202ENST00000409236 E9PLN8 166 aa11.06□□□□□ -0.64
AFF3-202ENST00000409236 PCP2Q8IVA1 136 aa11.06□□□□□ -0.64
AFF3-202ENST00000409236 FAM110DQ8TAY7 271 aaPredicted RBP11.06□□□□□ -0.64
AFF3-202ENST00000409236 IGKV1-39P01597 117 aa11.06□□□□□ -0.64
AFF3-202ENST00000409236 IGKV1D-39P04432 117 aa11.06□□□□□ -0.64
AFF3-202ENST00000409236 ABCA2Q9BZC7 2435 aa11.06□□□□□ -0.64
AFF3-202ENST00000409236 COX7A2LO14548 114 aa11.06□□□□□ -0.64
AFF3-202ENST00000409236 H3BRN7 92 aa11.05□□□□□ -0.64
AFF3-202ENST00000409236 LENEPQ9Y5L5 61 aa11.05□□□□□ -0.64
AFF3-202ENST00000409236 IGF2BP2-AS1Q96M15 143 aa11.05□□□□□ -0.64
AFF3-202ENST00000409236 IGKV2D-24A0A075B6R9 120 aa11.05□□□□□ -0.64
AFF3-202ENST00000409236 OVOL3O00110 214 aa11.05□□□□□ -0.64
AFF3-202ENST00000409236 ZNF837Q96EG3 531 aaPredicted RBP11.05□□□□□ -0.64
AFF3-202ENST00000409236 ZNF747Q9BV97 191 aa11.05□□□□□ -0.64
AFF3-202ENST00000409236 TFF2Q03403 129 aa11.05□□□□□ -0.64
AFF3-202ENST00000409236 HIST2H2BCQ6DN03 193 aa11.05□□□□□ -0.64
AFF3-202ENST00000409236 CLPSL2Q6UWE3 100 aa11.05□□□□□ -0.64
AFF3-202ENST00000409236 IGKV1-27A0A075B6S5 117 aa11.05□□□□□ -0.64
AFF3-202ENST00000409236 NDUFA7O95182 113 aa11.05□□□□□ -0.64
AFF3-202ENST00000409236 PTH2Q96A98 100 aa11.05□□□□□ -0.64
AFF3-202ENST00000409236 HOXB4P17483 251 aaPredicted RBP11.04□□□□□ -0.64
AFF3-202ENST00000409236 SPACA3Q8IXA5 215 aa11.04□□□□□ -0.64
AFF3-202ENST00000409236 TRAV23DV6A0A075B6W5 121 aa11.04□□□□□ -0.64
AFF3-202ENST00000409236 CD177Q8N6Q3 437 aa11.04□□□□□ -0.64
AFF3-202ENST00000409236 IGHV3-38A0A0C4DH36 116 aa11.03□□□□□ -0.64
AFF3-202ENST00000409236 KIR2DL5BQ8NHK3 375 aa11.03□□□□□ -0.64
AFF3-202ENST00000409236 WDR90Q96KV7 1748 aa11.03□□□□□ -0.64
AFF3-202ENST00000409236 ZNF672Q499Z4 452 aaPredicted RBP11.03□□□□□ -0.64
AFF3-202ENST00000409236 IGKV1-16P04430 117 aa11.03□□□□□ -0.64
AFF3-202ENST00000409236 SAA4P35542 130 aa11.03□□□□□ -0.64
AFF3-202ENST00000409236 IGFL4Q6B9Z1 124 aa11.03□□□□□ -0.64
AFF3-202ENST00000409236 PTPRSQ13332 1948 aa11.03□□□□□ -0.64
AFF3-202ENST00000409236 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.03□□□□□ -0.64
AFF3-202ENST00000409236 A4D1N5 150 aa11.03□□□□□ -0.64
AFF3-202ENST00000409236 RSPO4Q2I0M5 234 aaPredicted RBP11.03□□□□□ -0.64
AFF3-202ENST00000409236 CAMK2N2Q96S95 79 aa11.03□□□□□ -0.64
AFF3-202ENST00000409236 ZMAT4Q9H898 229 aa11.03□□□□□ -0.64
AFF3-202ENST00000409236 BPY2O14599 106 aa11.02□□□□□ -0.64
AFF3-202ENST00000409236 Q6P435 159 aa11.02□□□□□ -0.64
AFF3-202ENST00000409236 DIRC1Q969H9 104 aa11.02□□□□□ -0.64
AFF3-202ENST00000409236 LRP4O75096 1905 aa11.02□□□□□ -0.64
AFF3-202ENST00000409236 GAFA1Q96PS6 74 aa11.02□□□□□ -0.65
AFF3-202ENST00000409236 CCDC168Q8NDH2 2452 aa11.02□□□□□ -0.65
AFF3-202ENST00000409236 TIMM17AQ99595 171 aa11.02□□□□□ -0.65
AFF3-202ENST00000409236 SEM1Q6ZVN7 128 aa11.02□□□□□ -0.65
AFF3-202ENST00000409236 RNASE13Q5GAN3 156 aaKnown RBP11.02□□□□□ -0.65
AFF3-202ENST00000409236 MRPS36P82909 103 aaKnown RBP11.01□□□□□ -0.65
AFF3-202ENST00000409236 QRFPP83859 136 aa11.01□□□□□ -0.65
AFF3-202ENST00000409236 ELANEP08246 267 aa11.01□□□□□ -0.65
AFF3-202ENST00000409236 EIF4EBP2Q13542 120 aaPredicted RBP11.01□□□□□ -0.65
AFF3-202ENST00000409236 MST1LQ2TV78 715 aa11.01□□□□□ -0.65
AFF3-202ENST00000409236 PIFOQ8TCI5 191 aa11.01□□□□□ -0.65
AFF3-202ENST00000409236 ATP1A1-AS1Q5TC04 95 aa11.01□□□□□ -0.65
AFF3-202ENST00000409236 RNASE8Q8TDE3 154 aaKnown RBP11.01□□□□□ -0.65
AFF3-202ENST00000409236 VOPP1Q96AW1 172 aa11.01□□□□□ -0.65
AFF3-202ENST00000409236 IGHV4OR15-8A0A075B7B6 117 aa11.01□□□□□ -0.65
AFF3-202ENST00000409236 A0A087WW49 117 aa11.01□□□□□ -0.65
AFF3-202ENST00000409236 Q8N1Y9 231 aa11.01□□□□□ -0.65
AFF3-202ENST00000409236 IGKV1-12A0A0C4DH73 117 aa11□□□□□ -0.65
AFF3-202ENST00000409236 NDUFA1O15239 70 aa11□□□□□ -0.65
AFF3-202ENST00000409236 IGKV1D-12P01611 117 aa11□□□□□ -0.65
AFF3-202ENST00000409236 WI2-2373I1.2A0A1W2PRP0 233 aa11□□□□□ -0.65
AFF3-202ENST00000409236 ZNF833PQ6ZTB9 187 aa11□□□□□ -0.65
AFF3-202ENST00000409236 CSRP3P50461 194 aa11□□□□□ -0.65
AFF3-202ENST00000409236 WFDC2Q14508 124 aa11□□□□□ -0.65
AFF3-202ENST00000409236 C3orf56Q8N813 242 aa11□□□□□ -0.65
AFF3-202ENST00000409236 K7EQD1 137 aa11□□□□□ -0.65
AFF3-202ENST00000409236 B9D2Q9BPU9 175 aa11□□□□□ -0.65
AFF3-202ENST00000409236 IGHV1-58A0A0C4DH39 117 aa10.99□□□□□ -0.65
AFF3-202ENST00000409236 FXYD5Q96DB9 178 aa10.99□□□□□ -0.65
AFF3-202ENST00000409236 K7EM74 188 aa10.99□□□□□ -0.65
AFF3-202ENST00000409236 LYPD3O95274 346 aa10.99□□□□□ -0.65
AFF3-202ENST00000409236 TEX36Q5VZQ5 186 aa10.99□□□□□ -0.65
AFF3-202ENST00000409236 IMUPQ9GZP8 106 aa10.98□□□□□ -0.65
AFF3-202ENST00000409236 LECT2O14960 151 aa10.98□□□□□ -0.65
AFF3-202ENST00000409236 HIST2H2BDQ6DRA6 164 aa10.98□□□□□ -0.65
AFF3-202ENST00000409236 SPRR3Q9UBC9 169 aa10.98□□□□□ -0.65
AFF3-202ENST00000409236 C17orf77Q96MU5 243 aa10.98□□□□□ -0.65
AFF3-202ENST00000409236 C16orf74Q96GX8 76 aa10.98□□□□□ -0.65
AFF3-202ENST00000409236 TFF1P04155 84 aa10.98□□□□□ -0.65
AFF3-202ENST00000409236 UBE2E1P51965 193 aa10.98□□□□□ -0.65
AFF3-202ENST00000409236 SERP1Q9Y6X1 66 aa10.98□□□□□ -0.65
AFF3-202ENST00000409236 IGLV3-12A0A075B6K2 115 aa10.97□□□□□ -0.65
AFF3-202ENST00000409236 GPR179Q6PRD1 2367 aa10.97□□□□□ -0.65
AFF3-202ENST00000409236 EFNA2O43921 213 aa10.97□□□□□ -0.65
AFF3-202ENST00000409236 GNLYP22749 145 aa10.97□□□□□ -0.65
AFF3-202ENST00000409236 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.97□□□□□ -0.65
AFF3-202ENST00000409236 IGHV7-4-1A0A0J9YVY3 117 aa10.97□□□□□ -0.65
AFF3-202ENST00000409236 IGKV2-29A2NJV5 120 aaPredicted RBP10.97□□□□□ -0.65
AFF3-202ENST00000409236 WIPF3A6NGB9 483 aa10.97□□□□□ -0.65
AFF3-202ENST00000409236 COA6Q5JTJ3 125 aaKnown RBP10.97□□□□□ -0.65
AFF3-202ENST00000409236 ATP6V0E1O15342 81 aa10.97□□□□□ -0.65
AFF3-202ENST00000409236 FGF23Q9GZV9 251 aaPredicted RBP10.97□□□□□ -0.65
AFF3-202ENST00000409236 ANKHD1Q8IWZ3 2542 aaKnown RBP10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms