RNA–Protein interactions for RNA: ENST00000408314.1

SNORD88A-201, Transcript of small nucleolar RNA, C/D box 88A, humanhuman

BASIC

Gene SNORD88A, Length 91 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88A-201ENST00000408314 RYR1P21817 5038 aa6.22□□□□□ -1.41
SNORD88A-201ENST00000408314 TRBV6-1A0A0K0K1D8 114 aa6.21□□□□□ -1.42
SNORD88A-201ENST00000408314 HMSDA8MTL9 139 aa6.21□□□□□ -1.42
SNORD88A-201ENST00000408314 RHODO00212 210 aa6.21□□□□□ -1.42
SNORD88A-201ENST00000408314 PFDN1O60925 122 aa6.21□□□□□ -1.42
SNORD88A-201ENST00000408314 S100A9P06702 114 aaKnown RBP6.21□□□□□ -1.42
SNORD88A-201ENST00000408314 SEC11BP0C7V7 166 aa6.21□□□□□ -1.42
SNORD88A-201ENST00000408314 DNAH10OSP0CZ25 163 aa6.21□□□□□ -1.42
SNORD88A-201ENST00000408314 ZNF80P51504 273 aaPredicted RBP6.21□□□□□ -1.42
SNORD88A-201ENST00000408314 ZNF726P1Q15940 193 aa6.21□□□□□ -1.42
SNORD88A-201ENST00000408314 CFAP126Q5VTH2 177 aa6.21□□□□□ -1.42
SNORD88A-201ENST00000408314 DPPA3Q6W0C5 159 aa6.21□□□□□ -1.42
SNORD88A-201ENST00000408314 ZFP2Q6ZN57 461 aa6.21□□□□□ -1.42
SNORD88A-201ENST00000408314 KCNRGQ8N5I3 272 aa6.21□□□□□ -1.42
SNORD88A-201ENST00000408314 MSRB1Q9NZV6 116 aa6.21□□□□□ -1.42
SNORD88A-201ENST00000408314 B4DEV8 164 aa6.2□□□□□ -1.42
SNORD88A-201ENST00000408314 G3V3Q6 166 aa6.2□□□□□ -1.42
SNORD88A-201ENST00000408314 CRYGDP07320 174 aa6.2□□□□□ -1.42
SNORD88A-201ENST00000408314 AKR1C3P42330 323 aa6.2□□□□□ -1.42
SNORD88A-201ENST00000408314 FGF8P55075 233 aaPredicted RBP6.2□□□□□ -1.42
SNORD88A-201ENST00000408314 ZNF506Q5JVG8 444 aa6.2□□□□□ -1.42
SNORD88A-201ENST00000408314 FAM162BQ5T6X4 162 aa6.2□□□□□ -1.42
SNORD88A-201ENST00000408314 CST9LP1Q5W188 147 aa6.2□□□□□ -1.42
SNORD88A-201ENST00000408314 SLC25A29Q8N8R3 303 aa6.2□□□□□ -1.42
SNORD88A-201ENST00000408314 PGPEP1Q9NXJ5 209 aa6.2□□□□□ -1.42
SNORD88A-201ENST00000408314 IL36BQ9NZH7 164 aa6.2□□□□□ -1.42
SNORD88A-201ENST00000408314 PCLOQ9Y6V0 5065 aa6.2□□□□□ -1.42
SNORD88A-201ENST00000408314 TRAV34A0A0B4J273 112 aa6.19□□□□□ -1.42
SNORD88A-201ENST00000408314 IGHV3-38A0A0C4DH36 116 aa6.19□□□□□ -1.42
SNORD88A-201ENST00000408314 TEX46H3BTG2 121 aa6.19□□□□□ -1.42
SNORD88A-201ENST00000408314 BCL2L11O43521 198 aa6.19□□□□□ -1.42
SNORD88A-201ENST00000408314 RNASE3P12724 160 aaKnown RBP6.19□□□□□ -1.42
SNORD88A-201ENST00000408314 LGALSLQ3ZCW2 172 aaPredicted RBP6.19□□□□□ -1.42
SNORD88A-201ENST00000408314 OR10J3Q5JRS4 329 aa6.19□□□□□ -1.42
SNORD88A-201ENST00000408314 DNLZQ5SXM8 178 aa6.19□□□□□ -1.42
SNORD88A-201ENST00000408314 EIF5AL1Q6IS14 154 aaKnown RBP6.19□□□□□ -1.42
SNORD88A-201ENST00000408314 COX8CQ7Z4L0 72 aa6.19□□□□□ -1.42
SNORD88A-201ENST00000408314 WFDC10BQ8IUB3 73 aa6.19□□□□□ -1.42
SNORD88A-201ENST00000408314 OR11H4Q8NGC9 324 aa6.19□□□□□ -1.42
SNORD88A-201ENST00000408314 ZNF471Q9BX82 626 aaPredicted RBP6.19□□□□□ -1.42
SNORD88A-201ENST00000408314 CYTL1Q9NRR1 136 aa6.19□□□□□ -1.42
SNORD88A-201ENST00000408314 C11orf21Q9P2W6 132 aa6.19□□□□□ -1.42
SNORD88A-201ENST00000408314 A0A087WWC5 75 aa6.18□□□□□ -1.42
SNORD88A-201ENST00000408314 PGPEP1LA6NFU8 196 aa6.18□□□□□ -1.42
SNORD88A-201ENST00000408314 PSCAO43653 123 aa6.18□□□□□ -1.42
SNORD88A-201ENST00000408314 TPT1P13693 172 aaKnown RBP6.18□□□□□ -1.42
SNORD88A-201ENST00000408314 LINC01556Q5JQF7 62 aa6.18□□□□□ -1.42
SNORD88A-201ENST00000408314 LELP1Q5T871 98 aa6.18□□□□□ -1.42
SNORD88A-201ENST00000408314 Q6ZRN7 208 aaPredicted RBP6.18□□□□□ -1.42
SNORD88A-201ENST00000408314 ATP6V0E2Q8NHE4 81 aa6.18□□□□□ -1.42
SNORD88A-201ENST00000408314 FAM213BQ8TBF2 198 aa6.18□□□□□ -1.42
SNORD88A-201ENST00000408314 SFT2D1Q8WV19 159 aa6.18□□□□□ -1.42
SNORD88A-201ENST00000408314 LINC00479Q96M42 142 aa6.18□□□□□ -1.42
SNORD88A-201ENST00000408314 GTSF1LQ9H1H1 148 aa6.18□□□□□ -1.42
SNORD88A-201ENST00000408314 PARLQ9H300 379 aa6.18□□□□□ -1.42
SNORD88A-201ENST00000408314 PHLDA3Q9Y5J5 127 aa6.18□□□□□ -1.42
SNORD88A-201ENST00000408314 IGHV3-73A0A0B4J1V6 119 aa6.17□□□□□ -1.42
SNORD88A-201ENST00000408314 IGKV3D-20A0A0C4DH25 116 aa6.17□□□□□ -1.42
SNORD88A-201ENST00000408314 LOC100131303A0A0U1RQF7 123 aa6.17□□□□□ -1.42
SNORD88A-201ENST00000408314 H3BVH4 76 aa6.17□□□□□ -1.42
SNORD88A-201ENST00000408314 SH2D1AO60880 128 aa6.17□□□□□ -1.42
SNORD88A-201ENST00000408314 LTAP01374 205 aa6.17□□□□□ -1.42
SNORD88A-201ENST00000408314 RAB5CP51148 216 aa6.17□□□□□ -1.42
SNORD88A-201ENST00000408314 LAGE3Q14657 143 aa6.17□□□□□ -1.42
SNORD88A-201ENST00000408314 LINC01559Q495D7 138 aa6.17□□□□□ -1.42
SNORD88A-201ENST00000408314 TOR2AQ5JU69 321 aa6.17□□□□□ -1.42
SNORD88A-201ENST00000408314 ZFP82Q8N141 532 aa6.17□□□□□ -1.42
SNORD88A-201ENST00000408314 MBD3L1Q8WWY6 194 aa6.17□□□□□ -1.42
SNORD88A-201ENST00000408314 ZC2HC1AQ96GY0 325 aa6.17□□□□□ -1.42
SNORD88A-201ENST00000408314 KRBOX1C9JBD0 128 aa6.16□□□□□ -1.42
SNORD88A-201ENST00000408314 SMLR1H3BR10 107 aa6.16□□□□□ -1.42
SNORD88A-201ENST00000408314 M0R036 132 aa6.16□□□□□ -1.42
SNORD88A-201ENST00000408314 PAGE4O60829 102 aa6.16□□□□□ -1.42
SNORD88A-201ENST00000408314 CXCL1P09341 107 aa6.16□□□□□ -1.42
SNORD88A-201ENST00000408314 H2AFB1P0C5Y9 115 aa6.16□□□□□ -1.42
SNORD88A-201ENST00000408314 ZNF674Q2M3X9 581 aa6.16□□□□□ -1.42
SNORD88A-201ENST00000408314 MAPKAPK5-AS1Q8N8E1 139 aa6.16□□□□□ -1.42
SNORD88A-201ENST00000408314 MANBALQ9NQG1 85 aa6.16□□□□□ -1.42
SNORD88A-201ENST00000408314 LRP1BQ9NZR2 4599 aa6.16□□□□□ -1.42
SNORD88A-201ENST00000408314 A0A087WTM6 91 aa6.15□□□□□ -1.42
SNORD88A-201ENST00000408314 IBA57-AS1B1ANH7 110 aa6.15□□□□□ -1.42
SNORD88A-201ENST00000408314 ARMS2P0C7Q2 107 aa6.15□□□□□ -1.42
SNORD88A-201ENST00000408314 KRTAP10-2P60368 255 aa6.15□□□□□ -1.42
SNORD88A-201ENST00000408314 KCNIP4Q6PIL6 250 aa6.15□□□□□ -1.42
SNORD88A-201ENST00000408314 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.15□□□□□ -1.42
SNORD88A-201ENST00000408314 NTN5Q8WTR8 489 aaPredicted RBP6.15□□□□□ -1.42
SNORD88A-201ENST00000408314 SFRP2Q96HF1 295 aa6.15□□□□□ -1.42
SNORD88A-201ENST00000408314 TM2D2Q9BX73 214 aa6.15□□□□□ -1.42
SNORD88A-201ENST00000408314 COX11Q9Y6N1 276 aa6.15□□□□□ -1.42
SNORD88A-201ENST00000408314 URGCP-MRPS24S4R325 110 aa6.15□□□□□ -1.42
SNORD88A-201ENST00000408314 TRAV8-3A0A0A6YYJ7 113 aa6.14□□□□□ -1.43
SNORD88A-201ENST00000408314 TRBV10-1A0A0K0K1A3 114 aa6.14□□□□□ -1.43
SNORD88A-201ENST00000408314 GAGE12JA6NER3 117 aa6.14□□□□□ -1.43
SNORD88A-201ENST00000408314 M0R381 172 aa6.14□□□□□ -1.43
SNORD88A-201ENST00000408314 IFNA1P01562 189 aa6.14□□□□□ -1.43
SNORD88A-201ENST00000408314 GAGE1Q13065 139 aa6.14□□□□□ -1.43
SNORD88A-201ENST00000408314 GAGE4Q13068 117 aa6.14□□□□□ -1.43
SNORD88A-201ENST00000408314 GAGE5Q13069 117 aa6.14□□□□□ -1.43
SNORD88A-201ENST00000408314 GAGE13Q4V321 117 aa6.14□□□□□ -1.43
SNORD88A-201ENST00000408314 FAM74A4Q5TZK3 123 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms