RNA–Protein interactions for RNA: ENST00000405943.3

HDGFP1-201, Transcript of heparin binding growth factor pseudogene 1, humanhuman

BASIC

Gene HDGFP1, Length 252 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFP1-201ENST00000405943 NDUFA4O00483 81 aa3.42□□□□□ -1.86
HDGFP1-201ENST00000405943 GATA3P23771 443 aa3.42□□□□□ -1.86
HDGFP1-201ENST00000405943 POLR2KP53803 58 aaKnown RBP3.42□□□□□ -1.86
HDGFP1-201ENST00000405943 HERV-K104P63124 156 aa3.42□□□□□ -1.86
HDGFP1-201ENST00000405943 PRB3Q04118 309 aaPredicted RBP3.42□□□□□ -1.86
HDGFP1-201ENST00000405943 ZNF56Q15929 161 aa3.42□□□□□ -1.86
HDGFP1-201ENST00000405943 NSUN5P1Q3KNT7 163 aa3.42□□□□□ -1.86
HDGFP1-201ENST00000405943 ANXA2RQ3ZCQ2 193 aa3.42□□□□□ -1.86
HDGFP1-201ENST00000405943 Q6ZS46 218 aa3.42□□□□□ -1.86
HDGFP1-201ENST00000405943 GPHB5Q86YW7 130 aa3.42□□□□□ -1.86
HDGFP1-201ENST00000405943 APRG1Q8IVJ8 170 aa3.42□□□□□ -1.86
HDGFP1-201ENST00000405943 MUSTN1Q8IVN3 82 aa3.42□□□□□ -1.86
HDGFP1-201ENST00000405943 SMIM20Q8N5G0 67 aa3.42□□□□□ -1.86
HDGFP1-201ENST00000405943 ZFAND2AQ8N6M9 145 aa3.42□□□□□ -1.86
HDGFP1-201ENST00000405943 Q8N9W7 124 aa3.42□□□□□ -1.86
HDGFP1-201ENST00000405943 ICOSQ9Y6W8 199 aa3.42□□□□□ -1.86
HDGFP1-201ENST00000405943 FREM1Q5H8C1 2179 aa3.42□□□□□ -1.86
HDGFP1-201ENST00000405943 TRANK1O15050 2925 aa3.42□□□□□ -1.86
HDGFP1-201ENST00000405943 GON4LQ3T8J9 2241 aa3.42□□□□□ -1.86
HDGFP1-201ENST00000405943 TEX49A0A1B0GTD5 131 aa3.41□□□□□ -1.86
HDGFP1-201ENST00000405943 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP3.41□□□□□ -1.86
HDGFP1-201ENST00000405943 RNF223E7ERA6 249 aa3.41□□□□□ -1.86
HDGFP1-201ENST00000405943 I3L3M4 83 aa3.41□□□□□ -1.86
HDGFP1-201ENST00000405943 J3KRW8 73 aa3.41□□□□□ -1.86
HDGFP1-201ENST00000405943 ATP6V0E1O15342 81 aa3.41□□□□□ -1.86
HDGFP1-201ENST00000405943 TSHBP01222 138 aa3.41□□□□□ -1.86
HDGFP1-201ENST00000405943 PRSS2P07478 247 aa3.41□□□□□ -1.86
HDGFP1-201ENST00000405943 RPL11P62913 178 aaKnown RBP3.41□□□□□ -1.86
HDGFP1-201ENST00000405943 FOXC1Q12948 553 aa3.41□□□□□ -1.86
HDGFP1-201ENST00000405943 CIRBPQ14011 172 aaKnown RBP3.41□□□□□ -1.86
HDGFP1-201ENST00000405943 MIAQ16674 131 aa3.41□□□□□ -1.86
HDGFP1-201ENST00000405943 DEFB121Q5J5C9 76 aa3.41□□□□□ -1.86
HDGFP1-201ENST00000405943 SUMO4Q6EEV6 95 aa3.41□□□□□ -1.86
HDGFP1-201ENST00000405943 ZNRF2Q8NHG8 242 aa3.41□□□□□ -1.86
HDGFP1-201ENST00000405943 USMG5Q96IX5 58 aa3.41□□□□□ -1.86
HDGFP1-201ENST00000405943 FAM19A4Q96LR4 140 aa3.41□□□□□ -1.86
HDGFP1-201ENST00000405943 CCDC140Q96MF4 163 aa3.41□□□□□ -1.86
HDGFP1-201ENST00000405943 ODF3Q96PU9 254 aa3.41□□□□□ -1.86
HDGFP1-201ENST00000405943 AMELXQ99217 191 aa3.41□□□□□ -1.86
HDGFP1-201ENST00000405943 TIMM21Q9BVV7 248 aa3.41□□□□□ -1.86
HDGFP1-201ENST00000405943 IGHV3OR16-13A0A075B7E8 117 aa3.4□□□□□ -1.87
HDGFP1-201ENST00000405943 IGHV3-49A0A0A0MS15 119 aa3.4□□□□□ -1.87
HDGFP1-201ENST00000405943 IGHV3-74A0A0B4J1X5 117 aa3.4□□□□□ -1.87
HDGFP1-201ENST00000405943 TRAV41A0A0B4J266 112 aa3.4□□□□□ -1.87
HDGFP1-201ENST00000405943 A0A0J9YXY3 114 aa3.4□□□□□ -1.87
HDGFP1-201ENST00000405943 LYNX1G3V0Z9 82 aa3.4□□□□□ -1.87
HDGFP1-201ENST00000405943 H3BUA1 57 aa3.4□□□□□ -1.87
HDGFP1-201ENST00000405943 LST1O00453 97 aa3.4□□□□□ -1.87
HDGFP1-201ENST00000405943 TRIAP1O43715 76 aa3.4□□□□□ -1.87
HDGFP1-201ENST00000405943 TIMM17BO60830 172 aa3.4□□□□□ -1.87
HDGFP1-201ENST00000405943 CRLF1O75462 422 aa3.4□□□□□ -1.87
HDGFP1-201ENST00000405943 LYNX1P0DP58 116 aa3.4□□□□□ -1.87
HDGFP1-201ENST00000405943 RNASE3P12724 160 aaKnown RBP3.4□□□□□ -1.87
HDGFP1-201ENST00000405943 CXCL5P42830 114 aa3.4□□□□□ -1.87
HDGFP1-201ENST00000405943 UBE2E1P51965 193 aa3.4□□□□□ -1.87
HDGFP1-201ENST00000405943 EMP1P54849 157 aa3.4□□□□□ -1.87
HDGFP1-201ENST00000405943 TSPEAR-AS2P59090 65 aa3.4□□□□□ -1.87
HDGFP1-201ENST00000405943 PRR9Q5T870 116 aa3.4□□□□□ -1.87
HDGFP1-201ENST00000405943 LINC00643Q86TS7 51 aa3.4□□□□□ -1.87
HDGFP1-201ENST00000405943 BEX4Q9NWD9 120 aaPredicted RBP3.4□□□□□ -1.87
HDGFP1-201ENST00000405943 PYGO1Q9Y3Y4 419 aa3.4□□□□□ -1.87
HDGFP1-201ENST00000405943 TNFRSF18Q9Y5U5 241 aa3.4□□□□□ -1.87
HDGFP1-201ENST00000405943 KIF25-AS1Q9Y6Z4 181 aa3.4□□□□□ -1.87
HDGFP1-201ENST00000405943 RAI1Q7Z5J4 1906 aaPredicted RBP3.4□□□□□ -1.87
HDGFP1-201ENST00000405943 PI4KAP42356 2102 aa3.4□□□□□ -1.87
HDGFP1-201ENST00000405943 CABIN1Q9Y6J0 2220 aa3.39□□□□□ -1.87
HDGFP1-201ENST00000405943 TRGV11A0A075B6L2 103 aa3.39□□□□□ -1.87
HDGFP1-201ENST00000405943 IGHV1-58A0A0C4DH39 117 aa3.39□□□□□ -1.87
HDGFP1-201ENST00000405943 LINC01548A6NM66 108 aa3.39□□□□□ -1.87
HDGFP1-201ENST00000405943 KLLNB2CW77 178 aa3.39□□□□□ -1.87
HDGFP1-201ENST00000405943 H7C423 109 aa3.39□□□□□ -1.87
HDGFP1-201ENST00000405943 SOCS3O14543 225 aa3.39□□□□□ -1.87
HDGFP1-201ENST00000405943 UQCRQO14949 82 aa3.39□□□□□ -1.87
HDGFP1-201ENST00000405943 GNRH2O43555 120 aa3.39□□□□□ -1.87
HDGFP1-201ENST00000405943 BRI3O95415 125 aa3.39□□□□□ -1.87
HDGFP1-201ENST00000405943 INAFM2P0DMQ5 153 aa3.39□□□□□ -1.87
HDGFP1-201ENST00000405943 IGHV3-30-3P0DP02 117 aa3.39□□□□□ -1.87
HDGFP1-201ENST00000405943 CD28P10747 220 aa3.39□□□□□ -1.87
HDGFP1-201ENST00000405943 ZNF22P17026 224 aaPredicted RBP3.39□□□□□ -1.87
HDGFP1-201ENST00000405943 CRIP2P52943 208 aaPredicted RBP3.39□□□□□ -1.87
HDGFP1-201ENST00000405943 LINC00315P59091 139 aa3.39□□□□□ -1.87
HDGFP1-201ENST00000405943 RPL39P62891 51 aaKnown RBP3.39□□□□□ -1.87
HDGFP1-201ENST00000405943 C9orf153Q5TBE3 101 aa3.39□□□□□ -1.87
HDGFP1-201ENST00000405943 SHISA2Q6UWI4 295 aa3.39□□□□□ -1.87
HDGFP1-201ENST00000405943 C20orf203Q8NBC4 194 aa3.39□□□□□ -1.87
HDGFP1-201ENST00000405943 DEFB124Q8NES8 71 aa3.39□□□□□ -1.87
HDGFP1-201ENST00000405943 DNAJC30Q96LL9 226 aa3.39□□□□□ -1.87
HDGFP1-201ENST00000405943 C20orf173Q96LM9 149 aa3.39□□□□□ -1.87
HDGFP1-201ENST00000405943 OVOL2Q9BRP0 275 aa3.39□□□□□ -1.87
HDGFP1-201ENST00000405943 NDUFA12Q9UI09 145 aa3.39□□□□□ -1.87
HDGFP1-201ENST00000405943 MOB4Q9Y3A3 225 aa3.39□□□□□ -1.87
HDGFP1-201ENST00000405943 IGLV4-3A0A075B6K6 122 aa3.38□□□□□ -1.87
HDGFP1-201ENST00000405943 IGHV3-64A0A075B6Q5 118 aa3.38□□□□□ -1.87
HDGFP1-201ENST00000405943 A0A087WWL8 130 aa3.38□□□□□ -1.87
HDGFP1-201ENST00000405943 TINCRA0A1B0GVN0 87 aa3.38□□□□□ -1.87
HDGFP1-201ENST00000405943 J3KT08 172 aa3.38□□□□□ -1.87
HDGFP1-201ENST00000405943 M0QY20 66 aa3.38□□□□□ -1.87
HDGFP1-201ENST00000405943 NDUFA7O95182 113 aa3.38□□□□□ -1.87
HDGFP1-201ENST00000405943 MRPS36P82909 103 aaKnown RBP3.38□□□□□ -1.87
HDGFP1-201ENST00000405943 FAM74A4Q5TZK3 123 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms