RNA–Protein interactions for RNA: ENST00000403542.6

RBM39-206, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,883 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-206ENST00000403542 GPHB5Q86YW7 130 aa9.09□□□□□ -0.95
RBM39-206ENST00000403542 CHTOPQ9Y3Y2 248 aaKnown RBP9.09□□□□□ -0.95
RBM39-206ENST00000403542 TRBV7-1A0A0A6YYK4 115 aa9.08□□□□□ -0.96
RBM39-206ENST00000403542 CD300EQ496F6 205 aaPredicted RBP9.08□□□□□ -0.96
RBM39-206ENST00000403542 C9orf47Q6ZRZ4 202 aa9.08□□□□□ -0.96
RBM39-206ENST00000403542 OR10J6PQ8NGY7 276 aa9.08□□□□□ -0.96
RBM39-206ENST00000403542 PHLDA1Q8WV24 401 aaPredicted RBP9.08□□□□□ -0.96
RBM39-206ENST00000403542 MUC4Q99102 2169 aa9.08□□□□□ -0.96
RBM39-206ENST00000403542 IGLL5B9A064 214 aa9.08□□□□□ -0.96
RBM39-206ENST00000403542 C12orf74Q32Q52 190 aa9.08□□□□□ -0.96
RBM39-206ENST00000403542 ZFAND2AQ8N6M9 145 aa9.08□□□□□ -0.96
RBM39-206ENST00000403542 OR5A1Q8NGJ0 315 aa9.08□□□□□ -0.96
RBM39-206ENST00000403542 TMEM190Q8WZ59 177 aa9.08□□□□□ -0.96
RBM39-206ENST00000403542 NIPBLQ6KC79 2804 aaeCLIP9.07□□□□□ -0.969e-8■□□□□ 8.9
RBM39-206ENST00000403542 OR11H12B2RN74 326 aa9.07□□□□□ -0.96
RBM39-206ENST00000403542 TGFAP01135 160 aa9.07□□□□□ -0.96
RBM39-206ENST00000403542 IGHV4-38-2P0DP08 117 aa9.07□□□□□ -0.96
RBM39-206ENST00000403542 SRSF2Q01130 221 aaKnown RBP9.07□□□□□ -0.96
RBM39-206ENST00000403542 TMEM95Q3KNT9 176 aa9.07□□□□□ -0.96
RBM39-206ENST00000403542 FAM74A4Q5TZK3 123 aa9.07□□□□□ -0.96
RBM39-206ENST00000403542 OR11H1Q8NG94 326 aa9.07□□□□□ -0.96
RBM39-206ENST00000403542 OR11H2Q8NH07 326 aa9.07□□□□□ -0.96
RBM39-206ENST00000403542 FBN2P35556 2912 aa9.07□□□□□ -0.96
RBM39-206ENST00000403542 F5H697 171 aa9.07□□□□□ -0.96
RBM39-206ENST00000403542 C2orf66Q6UXQ4 117 aa9.07□□□□□ -0.96
RBM39-206ENST00000403542 SCGB1D4Q6XE38 83 aa9.07□□□□□ -0.96
RBM39-206ENST00000403542 ASIPP42127 132 aa9.06□□□□□ -0.96
RBM39-206ENST00000403542 LINC01546A6NGU7 62 aa9.06□□□□□ -0.96
RBM39-206ENST00000403542 F8VRH5 84 aa9.06□□□□□ -0.96
RBM39-206ENST00000403542 H7C1H1 209 aa9.06□□□□□ -0.96
RBM39-206ENST00000403542 DUSP14O95147 198 aaKnown RBP9.06□□□□□ -0.96
RBM39-206ENST00000403542 INSL3P51460 131 aa9.06□□□□□ -0.96
RBM39-206ENST00000403542 RPL39P62891 51 aaKnown RBP9.06□□□□□ -0.96
RBM39-206ENST00000403542 SMAGPQ0VAQ4 97 aa9.06□□□□□ -0.96
RBM39-206ENST00000403542 CFAP161Q6P656 301 aa9.06□□□□□ -0.96
RBM39-206ENST00000403542 HIGD1BQ9P298 99 aa9.06□□□□□ -0.96
RBM39-206ENST00000403542 SMPXQ9UHP9 88 aa9.06□□□□□ -0.96
RBM39-206ENST00000403542 PTPN13Q12923 2485 aa9.06□□□□□ -0.96
RBM39-206ENST00000403542 PRSS29PA6NIE9 313 aa9.06□□□□□ -0.96
RBM39-206ENST00000403542 PLEKHB2Q96CS7 222 aa9.06□□□□□ -0.96
RBM39-206ENST00000403542 PRADC1Q9BSG0 188 aa9.06□□□□□ -0.96
RBM39-206ENST00000403542 SONP18583 2426 aaKnown RBP9.05□□□□□ -0.96
RBM39-206ENST00000403542 H3BUX3 64 aa9.05□□□□□ -0.96
RBM39-206ENST00000403542 SLC25A16P16260 332 aa9.05□□□□□ -0.96
RBM39-206ENST00000403542 TM2D2Q9BX73 214 aa9.05□□□□□ -0.96
RBM39-206ENST00000403542 NF1P21359 2839 aa9.05□□□□□ -0.96
RBM39-206ENST00000403542 WNK1Q9H4A3 2382 aa9.05□□□□□ -0.96
RBM39-206ENST00000403542 TRAV21A0A0B4J279 112 aa9.05□□□□□ -0.96
RBM39-206ENST00000403542 TMEM238C9JI98 176 aa9.05□□□□□ -0.96
RBM39-206ENST00000403542 HLA-DRB4P13762 266 aa9.05□□□□□ -0.96
RBM39-206ENST00000403542 PLNP26678 52 aa9.05□□□□□ -0.96
RBM39-206ENST00000403542 PIFOQ8TCI5 191 aa9.05□□□□□ -0.96
RBM39-206ENST00000403542 BAALCQ8WXS3 180 aa9.05□□□□□ -0.96
RBM39-206ENST00000403542 MOB4Q9Y3A3 225 aa9.05□□□□□ -0.96
RBM39-206ENST00000403542 HLA-DRB4X5D2U9 266 aa9.05□□□□□ -0.96
RBM39-206ENST00000403542 EPG5Q9HCE0 2579 aa9.04□□□□□ -0.96
RBM39-206ENST00000403542 TRAV12-2A0A075B6T6 113 aa9.04□□□□□ -0.96
RBM39-206ENST00000403542 TRAV12-3A0A0B4J271 114 aa9.04□□□□□ -0.96
RBM39-206ENST00000403542 ZNF815PA8K554 130 aa9.04□□□□□ -0.96
RBM39-206ENST00000403542 APOMO95445 188 aa9.04□□□□□ -0.96
RBM39-206ENST00000403542 SRSF9Q13242 221 aaKnown RBP eCLIP9.04□□□□□ -0.965e-10■■■■□ 22.3
RBM39-206ENST00000403542 C9orf139Q6ZV77 190 aa9.04□□□□□ -0.96
RBM39-206ENST00000403542 RHPN1-AS1Q9BWJ2 59 aa9.04□□□□□ -0.96
RBM39-206ENST00000403542 DPH3P1Q9H4G8 78 aa9.04□□□□□ -0.96
RBM39-206ENST00000403542 TSSC4Q9Y5U2 329 aaPredicted RBP9.04□□□□□ -0.96
RBM39-206ENST00000403542 U3KQE9 123 aa9.04□□□□□ -0.96
RBM39-206ENST00000403542 MYMXA0A1B0GTQ4 84 aa9.04□□□□□ -0.96
RBM39-206ENST00000403542 A6NJY4 79 aa9.04□□□□□ -0.96
RBM39-206ENST00000403542 ITLN2Q8WWU7 325 aaPredicted RBP9.04□□□□□ -0.96
RBM39-206ENST00000403542 IGHV4-61A0A0C4DH41 118 aa9.03□□□□□ -0.96
RBM39-206ENST00000403542 LOC107984156A0A0G2JMH3 177 aa9.03□□□□□ -0.96
RBM39-206ENST00000403542 IGHV4-39P01824 125 aa9.03□□□□□ -0.96
RBM39-206ENST00000403542 C10orf99Q6UWK7 81 aa9.03□□□□□ -0.96
RBM39-206ENST00000403542 FOXI2Q6ZQN5 318 aa9.03□□□□□ -0.96
RBM39-206ENST00000403542 ARL17AQ8IVW1 177 aa9.03□□□□□ -0.96
RBM39-206ENST00000403542 PGPEP1Q9NXJ5 209 aa9.03□□□□□ -0.96
RBM39-206ENST00000403542 E9PLD3 99 aa9.03□□□□□ -0.96
RBM39-206ENST00000403542 LGALS1P09382 135 aaKnown RBP9.03□□□□□ -0.96
RBM39-206ENST00000403542 RNASE3P12724 160 aaKnown RBP9.03□□□□□ -0.96
RBM39-206ENST00000403542 HTN1P15515 57 aa9.03□□□□□ -0.96
RBM39-206ENST00000403542 ZNF256Q9Y2P7 627 aaPredicted RBP9.03□□□□□ -0.96
RBM39-206ENST00000403542 PIEZO1Q92508 2521 aa9.03□□□□□ -0.96
RBM39-206ENST00000403542 NACAE9PAV3 2078 aa9.03□□□□□ -0.96
RBM39-206ENST00000403542 IGSF10Q6WRI0 2623 aa9.03□□□□□ -0.96
RBM39-206ENST00000403542 IGHV3-64A0A075B6Q5 118 aa9.02□□□□□ -0.96
RBM39-206ENST00000403542 ORMDL2Q53FV1 153 aa9.02□□□□□ -0.96
RBM39-206ENST00000403542 NEXN-AS1Q8NBZ9 246 aa9.02□□□□□ -0.96
RBM39-206ENST00000403542 MRAP2Q96G30 205 aa9.02□□□□□ -0.96
RBM39-206ENST00000403542 OPRPNQ99935 248 aaPredicted RBP9.02□□□□□ -0.96
RBM39-206ENST00000403542 MRPL16Q9NX20 251 aaKnown RBP9.02□□□□□ -0.96
RBM39-206ENST00000403542 TP53TG1Q9Y2A0 90 aa9.02□□□□□ -0.96
RBM39-206ENST00000403542 CD7P09564 240 aa9.02□□□□□ -0.97
RBM39-206ENST00000403542 TOMM6Q96B49 74 aa9.02□□□□□ -0.97
RBM39-206ENST00000403542 ANKRD17O75179 2603 aaKnown RBP9.02□□□□□ -0.97
RBM39-206ENST00000403542 LINC01549A6NIU2 74 aa9.02□□□□□ -0.97
RBM39-206ENST00000403542 RNF223E7ERA6 249 aa9.02□□□□□ -0.97
RBM39-206ENST00000403542 LINC00477Q96M19 166 aa9.02□□□□□ -0.97
RBM39-206ENST00000403542 TEX15Q9BXT5 2789 aa9.01□□□□□ -0.97
RBM39-206ENST00000403542 ZNF688P0C7X2 276 aa9.01□□□□□ -0.97
RBM39-206ENST00000403542 AZU1P20160 251 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms