RNA–Protein interactions for RNA: ENST00000402989.5

SMC6-203, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMC6, Length 3,729 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-203ENST00000402989 MS4A6AQ9H2W1 248 aa3.3□□□□□ -1.88
SMC6-203ENST00000402989 NXT2Q9NPJ8 142 aaKnown RBP3.3□□□□□ -1.88
SMC6-203ENST00000402989 ZNF256Q9Y2P7 627 aaPredicted RBP3.3□□□□□ -1.88
SMC6-203ENST00000402989 APCP25054 2843 aa3.3□□□□□ -1.88
SMC6-203ENST00000402989 TRAV21A0A0B4J279 112 aa3.3□□□□□ -1.88
SMC6-203ENST00000402989 CD5LO43866 347 aa3.3□□□□□ -1.88
SMC6-203ENST00000402989 IGKCP01834 107 aa3.3□□□□□ -1.88
SMC6-203ENST00000402989 PRM2P04554 102 aa3.3□□□□□ -1.88
SMC6-203ENST00000402989 SCGB2A2Q13296 93 aa3.3□□□□□ -1.88
SMC6-203ENST00000402989 LAGE3Q14657 143 aa3.3□□□□□ -1.88
SMC6-203ENST00000402989 SPINK13Q1W4C9 94 aa3.3□□□□□ -1.88
SMC6-203ENST00000402989 LGALS9BQ3B8N2 356 aa3.3□□□□□ -1.88
SMC6-203ENST00000402989 LGALS9CQ6DKI2 356 aa3.3□□□□□ -1.88
SMC6-203ENST00000402989 SCGB3A1Q96QR1 104 aa3.3□□□□□ -1.88
SMC6-203ENST00000402989 U3KQK5 164 aa3.3□□□□□ -1.88
SMC6-203ENST00000402989 MUC4Q99102 2169 aa3.3□□□□□ -1.88
SMC6-203ENST00000402989 FN1P02751 2386 aaKnown RBP3.3□□□□□ -1.88
SMC6-203ENST00000402989 A6NDX4 124 aa3.3□□□□□ -1.88
SMC6-203ENST00000402989 B4DSR2 109 aa3.3□□□□□ -1.88
SMC6-203ENST00000402989 NDUFA4O00483 81 aa3.3□□□□□ -1.88
SMC6-203ENST00000402989 PPBPP02775 128 aa3.3□□□□□ -1.88
SMC6-203ENST00000402989 GAGE1Q13065 139 aa3.3□□□□□ -1.88
SMC6-203ENST00000402989 HIST2H2BCQ6DN03 193 aa3.3□□□□□ -1.88
SMC6-203ENST00000402989 FAM159AQ6UWV7 190 aa3.3□□□□□ -1.88
SMC6-203ENST00000402989 ZFAND2AQ8N6M9 145 aa3.3□□□□□ -1.88
SMC6-203ENST00000402989 Q8N8P6 123 aa3.3□□□□□ -1.88
SMC6-203ENST00000402989 JMJD8Q96S16 334 aa3.3□□□□□ -1.88
SMC6-203ENST00000402989 DAZ1Q9NQZ3 744 aaKnown RBP3.3□□□□□ -1.88
SMC6-203ENST00000402989 ATRQ13535 2644 aa3.3□□□□□ -1.88
SMC6-203ENST00000402989 AKAP9Q99996 3911 aa3.29□□□□□ -1.88
SMC6-203ENST00000402989 ITPR2Q14571 2701 aa3.29□□□□□ -1.88
SMC6-203ENST00000402989 A0A1W2PRX2 142 aa3.29□□□□□ -1.88
SMC6-203ENST00000402989 DPM2O94777 84 aa3.29□□□□□ -1.88
SMC6-203ENST00000402989 IGHG2P01859 326 aa3.29□□□□□ -1.88
SMC6-203ENST00000402989 C9orf47Q6ZRZ4 202 aa3.29□□□□□ -1.88
SMC6-203ENST00000402989 C18orf65Q6ZTR6 163 aa3.29□□□□□ -1.88
SMC6-203ENST00000402989 MTURNQ8N3F0 131 aa3.29□□□□□ -1.88
SMC6-203ENST00000402989 TMEM190Q8WZ59 177 aa3.29□□□□□ -1.88
SMC6-203ENST00000402989 DPF1Q92782 380 aa3.29□□□□□ -1.88
SMC6-203ENST00000402989 NHP2Q9NX24 153 aaKnown RBP3.29□□□□□ -1.88
SMC6-203ENST00000402989 PEF1Q9UBV8 284 aaKnown RBP3.29□□□□□ -1.88
SMC6-203ENST00000402989 A0A0G2JLM5 398 aa3.29□□□□□ -1.88
SMC6-203ENST00000402989 RBAKDNA6NC62 111 aa3.29□□□□□ -1.88
SMC6-203ENST00000402989 GAGE10A6NGK3 116 aa3.29□□□□□ -1.88
SMC6-203ENST00000402989 KRTAP10-9P60411 292 aa3.29□□□□□ -1.88
SMC6-203ENST00000402989 ZNF56Q15929 161 aa3.29□□□□□ -1.88
SMC6-203ENST00000402989 DEFB125Q8N687 156 aa3.29□□□□□ -1.88
SMC6-203ENST00000402989 VPS25Q9BRG1 176 aa3.29□□□□□ -1.88
SMC6-203ENST00000402989 CSTL1Q9H114 145 aa3.29□□□□□ -1.88
SMC6-203ENST00000402989 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.29□□□□□ -1.88
SMC6-203ENST00000402989 OVOL1O14753 267 aa3.29□□□□□ -1.88
SMC6-203ENST00000402989 FGF6P10767 208 aa3.29□□□□□ -1.88
SMC6-203ENST00000402989 COX6B1P14854 86 aa3.29□□□□□ -1.88
SMC6-203ENST00000402989 FXYD2P54710 66 aa3.29□□□□□ -1.88
SMC6-203ENST00000402989 NRACQ8N912 160 aa3.29□□□□□ -1.88
SMC6-203ENST00000402989 GATD1Q8NB37 220 aa3.29□□□□□ -1.88
SMC6-203ENST00000402989 SMIM2Q9BVW6 85 aa3.29□□□□□ -1.88
SMC6-203ENST00000402989 IGHV3-64A0A075B6Q5 118 aa3.28□□□□□ -1.88
SMC6-203ENST00000402989 A6NDN8 102 aa3.28□□□□□ -1.88
SMC6-203ENST00000402989 KNCNA6PVL3 124 aa3.28□□□□□ -1.88
SMC6-203ENST00000402989 SUMO2P61956 95 aaKnown RBP3.28□□□□□ -1.88
SMC6-203ENST00000402989 RPL39P62891 51 aaKnown RBP3.28□□□□□ -1.88
SMC6-203ENST00000402989 CD300EQ496F6 205 aaPredicted RBP3.28□□□□□ -1.88
SMC6-203ENST00000402989 USMG5Q96IX5 58 aa3.28□□□□□ -1.88
SMC6-203ENST00000402989 CHAC1Q9BUX1 264 aa3.28□□□□□ -1.88
SMC6-203ENST00000402989 DPH3P1Q9H4G8 78 aa3.28□□□□□ -1.88
SMC6-203ENST00000402989 SMPXQ9UHP9 88 aa3.28□□□□□ -1.88
SMC6-203ENST00000402989 U3KQE9 123 aa3.28□□□□□ -1.88
SMC6-203ENST00000402989 HELZ2Q9BYK8 2649 aaKnown RBP3.28□□□□□ -1.88
SMC6-203ENST00000402989 IGHV4OR15-8A0A075B7B6 117 aa3.28□□□□□ -1.88
SMC6-203ENST00000402989 IGHV3OR16-12A0A075B7B8 117 aa3.28□□□□□ -1.88
SMC6-203ENST00000402989 A0A087WW49 117 aa3.28□□□□□ -1.88
SMC6-203ENST00000402989 HOXA3O43365 443 aaPredicted RBP3.28□□□□□ -1.88
SMC6-203ENST00000402989 ID1P41134 155 aa3.28□□□□□ -1.88
SMC6-203ENST00000402989 SLURP1P55000 103 aa3.28□□□□□ -1.88
SMC6-203ENST00000402989 SRSF1Q07955 248 aaKnown RBP eCLIP3.28□□□□□ -1.88
SMC6-203ENST00000402989 MAPKAPK5-AS1Q8N8E1 139 aa3.28□□□□□ -1.88
SMC6-203ENST00000402989 RASL10AQ92737 203 aa3.28□□□□□ -1.88
SMC6-203ENST00000402989 BBC3Q96PG8 261 aaPredicted RBP3.28□□□□□ -1.88
SMC6-203ENST00000402989 HIST1H4GQ99525 98 aa3.28□□□□□ -1.88
SMC6-203ENST00000402989 MEGF9Q9H1U4 602 aa3.28□□□□□ -1.88
SMC6-203ENST00000402989 MDFICQ9P1T7 246 aa3.28□□□□□ -1.88
SMC6-203ENST00000402989 TEP1Q99973 2627 aaKnown RBP3.28□□□□□ -1.88
SMC6-203ENST00000402989 ATP5LO75964 103 aa3.28□□□□□ -1.89
SMC6-203ENST00000402989 DUSP14O95147 198 aaKnown RBP3.28□□□□□ -1.89
SMC6-203ENST00000402989 HSD52Q0P140 79 aa3.28□□□□□ -1.89
SMC6-203ENST00000402989 C2orf66Q6UXQ4 117 aa3.28□□□□□ -1.89
SMC6-203ENST00000402989 BOD1L2Q8IYS8 172 aa3.28□□□□□ -1.89
SMC6-203ENST00000402989 CHTOPQ9Y3Y2 248 aaKnown RBP3.28□□□□□ -1.89
SMC6-203ENST00000402989 NBEAL2Q6ZNJ1 2754 aa3.27□□□□□ -1.89
SMC6-203ENST00000402989 TRBV25-1A0A075B6N4 114 aa3.27□□□□□ -1.89
SMC6-203ENST00000402989 SAP30O75446 220 aa3.27□□□□□ -1.89
SMC6-203ENST00000402989 RNASE3P12724 160 aaKnown RBP3.27□□□□□ -1.89
SMC6-203ENST00000402989 PCP4P48539 62 aa3.27□□□□□ -1.89
SMC6-203ENST00000402989 SCGB1D4Q6XE38 83 aa3.27□□□□□ -1.89
SMC6-203ENST00000402989 COX8CQ7Z4L0 72 aa3.27□□□□□ -1.89
SMC6-203ENST00000402989 OPRPNQ99935 248 aaPredicted RBP3.27□□□□□ -1.89
SMC6-203ENST00000402989 CNFNQ9BYD5 112 aa3.27□□□□□ -1.89
SMC6-203ENST00000402989 CYSLTR1Q9Y271 337 aa3.27□□□□□ -1.89
SMC6-203ENST00000402989 TENM4Q6N022 2769 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms