RNA–Protein interactions for RNA: ENST00000399299.5

SMIM11A-203, Transcript of small integral membrane protein 11A, humanhuman

TSL 1 (best) BASIC

Gene SMIM11A, Length 1,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-203ENST00000399299 TIRAPP58753 221 aa10.15□□□□□ -0.78
SMIM11A-203ENST00000399299 UBE2G1P62253 170 aa10.15□□□□□ -0.78
SMIM11A-203ENST00000399299 EIF5AP63241 154 aaKnown RBP10.15□□□□□ -0.78
SMIM11A-203ENST00000399299 DPPA3Q6W0C5 159 aa10.15□□□□□ -0.78
SMIM11A-203ENST00000399299 S100A4P26447 101 aaKnown RBP10.14□□□□□ -0.79
SMIM11A-203ENST00000399299 RHOHQ15669 191 aa10.14□□□□□ -0.79
SMIM11A-203ENST00000399299 DNLZQ5SXM8 178 aa10.14□□□□□ -0.79
SMIM11A-203ENST00000399299 CST9LP1Q5W188 147 aa10.14□□□□□ -0.79
SMIM11A-203ENST00000399299 Q6ZRN7 208 aaPredicted RBP10.14□□□□□ -0.79
SMIM11A-203ENST00000399299 SLC25A29Q8N8R3 303 aa10.14□□□□□ -0.79
SMIM11A-203ENST00000399299 FAM213BQ8TBF2 198 aa10.14□□□□□ -0.79
SMIM11A-203ENST00000399299 ZC2HC1AQ96GY0 325 aa10.14□□□□□ -0.79
SMIM11A-203ENST00000399299 IL36BQ9NZH7 164 aa10.14□□□□□ -0.79
SMIM11A-203ENST00000399299 LY96Q9Y6Y9 160 aa10.14□□□□□ -0.79
SMIM11A-203ENST00000399299 TRAV9-2A0A087WT02 112 aa10.13□□□□□ -0.79
SMIM11A-203ENST00000399299 LOC100131303A0A0U1RQF7 123 aa10.13□□□□□ -0.79
SMIM11A-203ENST00000399299 LTAP01374 205 aa10.13□□□□□ -0.79
SMIM11A-203ENST00000399299 DNAH10OSP0CZ25 163 aa10.13□□□□□ -0.79
SMIM11A-203ENST00000399299 MGST1P10620 155 aaKnown RBP10.13□□□□□ -0.79
SMIM11A-203ENST00000399299 ASIPP42127 132 aa10.13□□□□□ -0.79
SMIM11A-203ENST00000399299 CRIP1P50238 77 aa10.13□□□□□ -0.79
SMIM11A-203ENST00000399299 SFT2D1Q8WV19 159 aa10.13□□□□□ -0.79
SMIM11A-203ENST00000399299 PRADC1Q9BSG0 188 aa10.13□□□□□ -0.79
SMIM11A-203ENST00000399299 A8MWV9 139 aa10.12□□□□□ -0.79
SMIM11A-203ENST00000399299 C16orf90A8MZG2 172 aa10.12□□□□□ -0.79
SMIM11A-203ENST00000399299 B4DEV8 164 aa10.12□□□□□ -0.79
SMIM11A-203ENST00000399299 KRBOX1C9JBD0 128 aa10.12□□□□□ -0.79
SMIM11A-203ENST00000399299 PAGE4O60829 102 aa10.12□□□□□ -0.79
SMIM11A-203ENST00000399299 SH2D1AO60880 128 aa10.12□□□□□ -0.79
SMIM11A-203ENST00000399299 TPT1P13693 172 aaKnown RBP10.12□□□□□ -0.79
SMIM11A-203ENST00000399299 AKR1C3P42330 323 aa10.12□□□□□ -0.79
SMIM11A-203ENST00000399299 ZNF674Q2M3X9 581 aa10.12□□□□□ -0.79
SMIM11A-203ENST00000399299 FAM162BQ5T6X4 162 aa10.12□□□□□ -0.79
SMIM11A-203ENST00000399299 ZFP2Q6ZN57 461 aa10.12□□□□□ -0.79
SMIM11A-203ENST00000399299 TMUB2Q71RG4 321 aa10.12□□□□□ -0.79
SMIM11A-203ENST00000399299 WFDC10BQ8IUB3 73 aa10.12□□□□□ -0.79
SMIM11A-203ENST00000399299 NHLRC2Q8NBF2 726 aa10.12□□□□□ -0.79
SMIM11A-203ENST00000399299 PFDN1O60925 122 aa10.11□□□□□ -0.79
SMIM11A-203ENST00000399299 S100A9P06702 114 aaKnown RBP10.11□□□□□ -0.79
SMIM11A-203ENST00000399299 EVI2AP22794 236 aa10.11□□□□□ -0.79
SMIM11A-203ENST00000399299 LGALSLQ3ZCW2 172 aaPredicted RBP10.11□□□□□ -0.79
SMIM11A-203ENST00000399299 NFE4Q86UQ8 179 aa10.11□□□□□ -0.79
SMIM11A-203ENST00000399299 PARLQ9H300 379 aa10.11□□□□□ -0.79
SMIM11A-203ENST00000399299 H2AFB1P0C5Y9 115 aa10.1□□□□□ -0.79
SMIM11A-203ENST00000399299 LINC01559Q495D7 138 aa10.1□□□□□ -0.79
SMIM11A-203ENST00000399299 IGHV3-73A0A0B4J1V6 119 aa10.09□□□□□ -0.79
SMIM11A-203ENST00000399299 H3BVH4 76 aa10.09□□□□□ -0.79
SMIM11A-203ENST00000399299 M0R036 132 aa10.09□□□□□ -0.79
SMIM11A-203ENST00000399299 SPATA12Q7Z6I5 190 aa10.09□□□□□ -0.79
SMIM11A-203ENST00000399299 C10orf126Q8N4M7 172 aa10.09□□□□□ -0.79
SMIM11A-203ENST00000399299 A0A1B0GV50 99 aa10.08□□□□□ -0.8
SMIM11A-203ENST00000399299 ARMS2P0C7Q2 107 aa10.08□□□□□ -0.8
SMIM11A-203ENST00000399299 RAB5CP51148 216 aa10.08□□□□□ -0.8
SMIM11A-203ENST00000399299 UFSP1Q6NVU6 142 aa10.08□□□□□ -0.8
SMIM11A-203ENST00000399299 TCTE3Q8IZS6 198 aa10.08□□□□□ -0.8
SMIM11A-203ENST00000399299 SYT8Q8NBV8 401 aa10.08□□□□□ -0.8
SMIM11A-203ENST00000399299 SCRT2Q9NQ03 307 aa10.08□□□□□ -0.8
SMIM11A-203ENST00000399299 MSRB1Q9NZV6 116 aa10.08□□□□□ -0.8
SMIM11A-203ENST00000399299 LRP1BQ9NZR2 4599 aa10.07□□□□□ -0.8
SMIM11A-203ENST00000399299 TRAV1-1A0A0B4J248 108 aa10.07□□□□□ -0.8
SMIM11A-203ENST00000399299 IGHV3-38A0A0C4DH36 116 aa10.07□□□□□ -0.8
SMIM11A-203ENST00000399299 SCO2A0A1W2PP80 73 aa10.07□□□□□ -0.8
SMIM11A-203ENST00000399299 RHODO00212 210 aa10.07□□□□□ -0.8
SMIM11A-203ENST00000399299 CDK2AP2O75956 126 aa10.07□□□□□ -0.8
SMIM11A-203ENST00000399299 CRYGDP07320 174 aa10.07□□□□□ -0.8
SMIM11A-203ENST00000399299 LINC01556Q5JQF7 62 aa10.07□□□□□ -0.8
SMIM11A-203ENST00000399299 DMRTA1Q5VZB9 504 aa10.07□□□□□ -0.8
SMIM11A-203ENST00000399299 EIF5AL1Q6IS14 154 aaKnown RBP10.07□□□□□ -0.8
SMIM11A-203ENST00000399299 MLST8Q9BVC4 326 aa10.07□□□□□ -0.8
SMIM11A-203ENST00000399299 MANBALQ9NQG1 85 aa10.07□□□□□ -0.8
SMIM11A-203ENST00000399299 TRAV8-6A0A0B4J262 113 aa10.06□□□□□ -0.8
SMIM11A-203ENST00000399299 GRIFINA4D1Z8 144 aa10.06□□□□□ -0.8
SMIM11A-203ENST00000399299 CXCL1P09341 107 aa10.06□□□□□ -0.8
SMIM11A-203ENST00000399299 LINC00694P0DN24 101 aa10.06□□□□□ -0.8
SMIM11A-203ENST00000399299 KRTAP10-2P60368 255 aa10.06□□□□□ -0.8
SMIM11A-203ENST00000399299 ERVFC1-1P60608 527 aa10.06□□□□□ -0.8
SMIM11A-203ENST00000399299 LELP1Q5T871 98 aa10.06□□□□□ -0.8
SMIM11A-203ENST00000399299 Q6ZSN1 163 aa10.06□□□□□ -0.8
SMIM11A-203ENST00000399299 ATP6V0E2Q8NHE4 81 aa10.06□□□□□ -0.8
SMIM11A-203ENST00000399299 GTSF1LQ9H1H1 148 aa10.06□□□□□ -0.8
SMIM11A-203ENST00000399299 PHLDA3Q9Y5J5 127 aa10.06□□□□□ -0.8
SMIM11A-203ENST00000399299 TNFRSF18Q9Y5U5 241 aa10.06□□□□□ -0.8
SMIM11A-203ENST00000399299 EREGO14944 169 aa10.05□□□□□ -0.8
SMIM11A-203ENST00000399299 OR10J3Q5JRS4 329 aa10.05□□□□□ -0.8
SMIM11A-203ENST00000399299 ZFP82Q8N141 532 aa10.05□□□□□ -0.8
SMIM11A-203ENST00000399299 SAMD10Q9BYL1 202 aa10.05□□□□□ -0.8
SMIM11A-203ENST00000399299 JPT2Q9H910 190 aa10.05□□□□□ -0.8
SMIM11A-203ENST00000399299 TMSB15BA0A087X1C1 80 aa10.04□□□□□ -0.8
SMIM11A-203ENST00000399299 TEX46H3BTG2 121 aa10.04□□□□□ -0.8
SMIM11A-203ENST00000399299 SULT1A2P50226 295 aa10.04□□□□□ -0.8
SMIM11A-203ENST00000399299 BAGE2Q86Y30 109 aa10.04□□□□□ -0.8
SMIM11A-203ENST00000399299 C11orf52Q96A22 123 aa10.04□□□□□ -0.8
SMIM11A-203ENST00000399299 SFRP2Q96HF1 295 aa10.04□□□□□ -0.8
SMIM11A-203ENST00000399299 C1QBP02746 253 aa10.03□□□□□ -0.8
SMIM11A-203ENST00000399299 Q6ZNX1 250 aa10.03□□□□□ -0.8
SMIM11A-203ENST00000399299 KRTAP17-1Q9BYP8 105 aa10.03□□□□□ -0.8
SMIM11A-203ENST00000399299 PGPEP1Q9NXJ5 209 aa10.03□□□□□ -0.8
SMIM11A-203ENST00000399299 GNG13Q9P2W3 67 aa10.03□□□□□ -0.8
SMIM11A-203ENST00000399299 HSPG2P98160 4391 aa10.03□□□□□ -0.8
SMIM11A-203ENST00000399299 A0A087WTM6 91 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 96.2 ms