RNA–Protein interactions for RNA: ENST00000399264.1

CCDC144A-205, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 2

Gene CCDC144A, Length 2,815 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-205ENST00000399264 C10orf105Q8TEF2 133 aa10.95□□□□□ -0.66
CCDC144A-205ENST00000399264 CCL19Q99731 98 aa10.95□□□□□ -0.66
CCDC144A-205ENST00000399264 CHAC1Q9BUX1 264 aa10.95□□□□□ -0.66
CCDC144A-205ENST00000399264 MEGF9Q9H1U4 602 aa10.95□□□□□ -0.66
CCDC144A-205ENST00000399264 PHLDA3Q9Y5J5 127 aa10.95□□□□□ -0.66
CCDC144A-205ENST00000399264 SIVA1O15304 175 aa10.94□□□□□ -0.66
CCDC144A-205ENST00000399264 CDKN1BP46527 198 aa10.94□□□□□ -0.66
CCDC144A-205ENST00000399264 AP1S3Q96PC3 154 aa10.94□□□□□ -0.66
CCDC144A-205ENST00000399264 SMIM2Q9BVW6 85 aa10.94□□□□□ -0.66
CCDC144A-205ENST00000399264 RNF223E7ERA6 249 aa10.94□□□□□ -0.66
CCDC144A-205ENST00000399264 RNASE3P12724 160 aaKnown RBP10.94□□□□□ -0.66
CCDC144A-205ENST00000399264 SRSF1Q07955 248 aaKnown RBP eCLIP10.94□□□□□ -0.66
CCDC144A-205ENST00000399264 LINC00477Q96M19 166 aa10.94□□□□□ -0.66
CCDC144A-205ENST00000399264 PIMREGQ9BSJ6 248 aa10.94□□□□□ -0.66
CCDC144A-205ENST00000399264 A6NDX4 124 aa10.94□□□□□ -0.66
CCDC144A-205ENST00000399264 MAPK1IP1LQ8NDC0 245 aa10.94□□□□□ -0.66
CCDC144A-205ENST00000399264 EPG5Q9HCE0 2579 aa10.93□□□□□ -0.66
CCDC144A-205ENST00000399264 SONP18583 2426 aaKnown RBP10.93□□□□□ -0.66
CCDC144A-205ENST00000399264 CRIP2P52943 208 aaPredicted RBP10.93□□□□□ -0.66
CCDC144A-205ENST00000399264 TRAV21A0A0B4J279 112 aa10.93□□□□□ -0.66
CCDC144A-205ENST00000399264 IGKV3-20P01619 116 aa10.93□□□□□ -0.66
CCDC144A-205ENST00000399264 SUMO2P61956 95 aaKnown RBP10.93□□□□□ -0.66
CCDC144A-205ENST00000399264 A0A087WX48 190 aa10.92□□□□□ -0.66
CCDC144A-205ENST00000399264 ATP5LO75964 103 aa10.92□□□□□ -0.66
CCDC144A-205ENST00000399264 ASIPP42127 132 aa10.92□□□□□ -0.66
CCDC144A-205ENST00000399264 NHP2Q9NX24 153 aaKnown RBP10.92□□□□□ -0.66
CCDC144A-205ENST00000399264 NAV2Q8IVL1 2488 aa10.92□□□□□ -0.66
CCDC144A-205ENST00000399264 NOTCH3Q9UM47 2321 aa10.91□□□□□ -0.66
CCDC144A-205ENST00000399264 CHD6Q8TD26 2715 aa10.91□□□□□ -0.66
CCDC144A-205ENST00000399264 PRSS47A8MTI9 375 aa10.91□□□□□ -0.66
CCDC144A-205ENST00000399264 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.91□□□□□ -0.66
CCDC144A-205ENST00000399264 OVOL1O14753 267 aa10.91□□□□□ -0.66
CCDC144A-205ENST00000399264 SCGB3A1Q96QR1 104 aa10.91□□□□□ -0.66
CCDC144A-205ENST00000399264 VPS25Q9BRG1 176 aa10.91□□□□□ -0.66
CCDC144A-205ENST00000399264 A0A087WWL8 130 aa10.9□□□□□ -0.66
CCDC144A-205ENST00000399264 A0A1W2PPM0 123 aa10.9□□□□□ -0.66
CCDC144A-205ENST00000399264 EMP1P54849 157 aa10.9□□□□□ -0.66
CCDC144A-205ENST00000399264 FAM19A4Q96LR4 140 aa10.9□□□□□ -0.66
CCDC144A-205ENST00000399264 K7EP34 96 aa10.9□□□□□ -0.66
CCDC144A-205ENST00000399264 CLEC2AQ6UVW9 174 aa10.9□□□□□ -0.66
CCDC144A-205ENST00000399264 MRAP2Q96G30 205 aa10.9□□□□□ -0.66
CCDC144A-205ENST00000399264 DPH3P1Q9H4G8 78 aa10.9□□□□□ -0.66
CCDC144A-205ENST00000399264 SPCS1Q9Y6A9 102 aa10.9□□□□□ -0.66
CCDC144A-205ENST00000399264 TRAV12-3A0A0B4J271 114 aa10.9□□□□□ -0.67
CCDC144A-205ENST00000399264 IGLV1-40P01703 118 aa10.9□□□□□ -0.67
CCDC144A-205ENST00000399264 IGHV4-59P01825 116 aa10.9□□□□□ -0.67
CCDC144A-205ENST00000399264 MSMBP08118 114 aa10.9□□□□□ -0.67
CCDC144A-205ENST00000399264 LENEPQ9Y5L5 61 aa10.9□□□□□ -0.67
CCDC144A-205ENST00000399264 TRAV12-2A0A075B6T6 113 aa10.89□□□□□ -0.67
CCDC144A-205ENST00000399264 SMIM13P0DJ93 91 aa10.89□□□□□ -0.67
CCDC144A-205ENST00000399264 SAMD5Q5TGI4 173 aa10.89□□□□□ -0.67
CCDC144A-205ENST00000399264 USMG5Q96IX5 58 aa10.89□□□□□ -0.67
CCDC144A-205ENST00000399264 PHLDA1Q8WV24 401 aaPredicted RBP10.89□□□□□ -0.67
CCDC144A-205ENST00000399264 CSTL1Q9H114 145 aa10.89□□□□□ -0.67
CCDC144A-205ENST00000399264 DAZ1Q9NQZ3 744 aaKnown RBP10.89□□□□□ -0.67
CCDC144A-205ENST00000399264 SMPXQ9UHP9 88 aa10.89□□□□□ -0.67
CCDC144A-205ENST00000399264 C2orf66Q6UXQ4 117 aa10.88□□□□□ -0.67
CCDC144A-205ENST00000399264 DUX5Q96PT3 197 aa10.88□□□□□ -0.67
CCDC144A-205ENST00000399264 USP24Q9UPU5 2620 aa10.88□□□□□ -0.67
CCDC144A-205ENST00000399264 ZNF688P0C7X2 276 aa10.88□□□□□ -0.67
CCDC144A-205ENST00000399264 LINC00315P59091 139 aa10.88□□□□□ -0.67
CCDC144A-205ENST00000399264 GTF2H5Q6ZYL4 71 aa10.88□□□□□ -0.67
CCDC144A-205ENST00000399264 DUSP14O95147 198 aaKnown RBP10.87□□□□□ -0.67
CCDC144A-205ENST00000399264 CEND1Q8N111 149 aa10.87□□□□□ -0.67
CCDC144A-205ENST00000399264 TOMM6Q96B49 74 aa10.87□□□□□ -0.67
CCDC144A-205ENST00000399264 HIGD1BQ9P298 99 aa10.87□□□□□ -0.67
CCDC144A-205ENST00000399264 CHTOPQ9Y3Y2 248 aaKnown RBP10.87□□□□□ -0.67
CCDC144A-205ENST00000399264 AKAP9Q99996 3911 aa10.87□□□□□ -0.67
CCDC144A-205ENST00000399264 NBPF19A0A087WUL8 3843 aa10.87□□□□□ -0.67
CCDC144A-205ENST00000399264 F8VRH5 84 aa10.87□□□□□ -0.67
CCDC144A-205ENST00000399264 NEXN-AS1Q8NBZ9 246 aa10.87□□□□□ -0.67
CCDC144A-205ENST00000399264 DCANP1Q8TF63 244 aa10.87□□□□□ -0.67
CCDC144A-205ENST00000399264 ATP6V0BQ99437 205 aa10.87□□□□□ -0.67
CCDC144A-205ENST00000399264 WNK1Q9H4A3 2382 aa10.87□□□□□ -0.67
CCDC144A-205ENST00000399264 RPL39P62891 51 aaKnown RBP10.86□□□□□ -0.67
CCDC144A-205ENST00000399264 BAALCQ8WXS3 180 aa10.86□□□□□ -0.67
CCDC144A-205ENST00000399264 PRSS29PA6NIE9 313 aa10.86□□□□□ -0.67
CCDC144A-205ENST00000399264 H7C1H1 209 aa10.86□□□□□ -0.67
CCDC144A-205ENST00000399264 RIPPLY3P57055 190 aa10.86□□□□□ -0.67
CCDC144A-205ENST00000399264 CFHR3Q02985 330 aa10.86□□□□□ -0.67
CCDC144A-205ENST00000399264 KIF25-AS1Q9Y6Z4 181 aa10.86□□□□□ -0.67
CCDC144A-205ENST00000399264 CD7P09564 240 aa10.85□□□□□ -0.67
CCDC144A-205ENST00000399264 DEFB112Q30KQ8 113 aa10.85□□□□□ -0.67
CCDC144A-205ENST00000399264 HIST2H2BDQ6DRA6 164 aa10.85□□□□□ -0.67
CCDC144A-205ENST00000399264 CCDC168Q8NDH2 2452 aa10.85□□□□□ -0.67
CCDC144A-205ENST00000399264 TSHBP01222 138 aa10.85□□□□□ -0.67
CCDC144A-205ENST00000399264 PSMG4Q5JS54 123 aa10.85□□□□□ -0.67
CCDC144A-205ENST00000399264 FAM74A4Q5TZK3 123 aa10.85□□□□□ -0.67
CCDC144A-205ENST00000399264 KLHL30-AS1Q8NEE0 82 aa10.85□□□□□ -0.67
CCDC144A-205ENST00000399264 MDFICQ9P1T7 246 aa10.85□□□□□ -0.67
CCDC144A-205ENST00000399264 FABP2P12104 132 aa10.85□□□□□ -0.67
CCDC144A-205ENST00000399264 ORMDL2Q53FV1 153 aa10.85□□□□□ -0.67
CCDC144A-205ENST00000399264 APRG1Q8IVJ8 170 aa10.85□□□□□ -0.67
CCDC144A-205ENST00000399264 MTURNQ8N3F0 131 aa10.85□□□□□ -0.67
CCDC144A-205ENST00000399264 TM2D2Q9BX73 214 aa10.85□□□□□ -0.67
CCDC144A-205ENST00000399264 KLLNB2CW77 178 aa10.84□□□□□ -0.67
CCDC144A-205ENST00000399264 F5H697 171 aa10.84□□□□□ -0.67
CCDC144A-205ENST00000399264 PLNP26678 52 aa10.84□□□□□ -0.67
CCDC144A-205ENST00000399264 HIST1H4GQ99525 98 aa10.84□□□□□ -0.67
CCDC144A-205ENST00000399264 C20orf78Q9BR46 151 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms