RNA–Protein interactions for RNA: ENST00000398661.6

HMGCLL1-205, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 2 BASIC

Gene HMGCLL1, Length 2,532 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-205ENST00000398661 GAGE12GP0CL81 117 aa7.83□□□□□ -1.16
HMGCLL1-205ENST00000398661 GAGE12IP0CL82 117 aa7.83□□□□□ -1.16
HMGCLL1-205ENST00000398661 EGR2P11161 476 aaPredicted RBP7.83□□□□□ -1.16
HMGCLL1-205ENST00000398661 EFNA4P52798 201 aa7.83□□□□□ -1.16
HMGCLL1-205ENST00000398661 UBE2D3P61077 147 aa7.83□□□□□ -1.16
HMGCLL1-205ENST00000398661 UBE2D2P62837 147 aa7.83□□□□□ -1.16
HMGCLL1-205ENST00000398661 GAGE4Q13068 117 aa7.83□□□□□ -1.16
HMGCLL1-205ENST00000398661 ANXA2RQ3ZCQ2 193 aa7.83□□□□□ -1.16
HMGCLL1-205ENST00000398661 SBSPONQ8IVN8 264 aa7.83□□□□□ -1.16
HMGCLL1-205ENST00000398661 KIR2DL4Q99706 377 aa7.83□□□□□ -1.16
HMGCLL1-205ENST00000398661 CCDC179H3BU77 68 aa7.82□□□□□ -1.16
HMGCLL1-205ENST00000398661 GATA1P15976 413 aaPredicted RBP7.82□□□□□ -1.16
HMGCLL1-205ENST00000398661 NDUFV3P56181 108 aaKnown RBP7.82□□□□□ -1.16
HMGCLL1-205ENST00000398661 LYRM7Q5U5X0 104 aa7.82□□□□□ -1.16
HMGCLL1-205ENST00000398661 SHANK2-AS3Q9BTD1 123 aa7.82□□□□□ -1.16
HMGCLL1-205ENST00000398661 IGLV2-18A0A075B6J9 118 aa7.82□□□□□ -1.16
HMGCLL1-205ENST00000398661 A8MWV9 139 aa7.82□□□□□ -1.16
HMGCLL1-205ENST00000398661 H3BRN7 92 aa7.82□□□□□ -1.16
HMGCLL1-205ENST00000398661 LGALS1P09382 135 aaKnown RBP7.82□□□□□ -1.16
HMGCLL1-205ENST00000398661 UBE2D1P51668 147 aa7.82□□□□□ -1.16
HMGCLL1-205ENST00000398661 MAST4O15021 2626 aa7.81□□□□□ -1.16
HMGCLL1-205ENST00000398661 RPL27AP46776 148 aaKnown RBP7.81□□□□□ -1.16
HMGCLL1-205ENST00000398661 GAGE2BQ13066 116 aa7.81□□□□□ -1.16
HMGCLL1-205ENST00000398661 GAGE2EQ4V326 116 aa7.81□□□□□ -1.16
HMGCLL1-205ENST00000398661 ANKRD29Q8N6D5 301 aa7.81□□□□□ -1.16
HMGCLL1-205ENST00000398661 RAX2Q96IS3 184 aa7.81□□□□□ -1.16
HMGCLL1-205ENST00000398661 PSMG3-AS1Q96PY0 264 aa7.81□□□□□ -1.16
HMGCLL1-205ENST00000398661 RASL11BQ9BPW5 248 aa7.81□□□□□ -1.16
HMGCLL1-205ENST00000398661 FBXL15Q9H469 300 aa7.81□□□□□ -1.16
HMGCLL1-205ENST00000398661 GAGE2DQ9UEU5 116 aa7.81□□□□□ -1.16
HMGCLL1-205ENST00000398661 FABP5P3A8MUU1 101 aa7.81□□□□□ -1.16
HMGCLL1-205ENST00000398661 BRI3O95415 125 aa7.81□□□□□ -1.16
HMGCLL1-205ENST00000398661 TCL1BO95988 128 aa7.81□□□□□ -1.16
HMGCLL1-205ENST00000398661 PLGLAQ15195 96 aa7.81□□□□□ -1.16
HMGCLL1-205ENST00000398661 TIMD4Q96H15 378 aa7.81□□□□□ -1.16
HMGCLL1-205ENST00000398661 H3BVH4 76 aa7.8□□□□□ -1.16
HMGCLL1-205ENST00000398661 TMEM78Q5T7P6 136 aa7.8□□□□□ -1.16
HMGCLL1-205ENST00000398661 COX8CQ7Z4L0 72 aa7.8□□□□□ -1.16
HMGCLL1-205ENST00000398661 AJUBAQ96IF1 538 aa7.8□□□□□ -1.16
HMGCLL1-205ENST00000398661 AAMDCQ9H7C9 122 aa7.8□□□□□ -1.16
HMGCLL1-205ENST00000398661 FN1P02751 2386 aaKnown RBP7.8□□□□□ -1.16
HMGCLL1-205ENST00000398661 TRBV20-1A0A075B6N2 111 aa7.8□□□□□ -1.16
HMGCLL1-205ENST00000398661 H7C1H1 209 aa7.8□□□□□ -1.16
HMGCLL1-205ENST00000398661 MRPS12O15235 138 aaKnown RBP7.8□□□□□ -1.16
HMGCLL1-205ENST00000398661 ZNF80P51504 273 aaPredicted RBP7.8□□□□□ -1.16
HMGCLL1-205ENST00000398661 LAGE3Q14657 143 aa7.8□□□□□ -1.16
HMGCLL1-205ENST00000398661 TNFRSF18Q9Y5U5 241 aa7.8□□□□□ -1.16
HMGCLL1-205ENST00000398661 F8VRH5 84 aa7.79□□□□□ -1.16
HMGCLL1-205ENST00000398661 ZNF575Q86XF7 245 aa7.79□□□□□ -1.16
HMGCLL1-205ENST00000398661 PRR25Q96S07 402 aa7.79□□□□□ -1.16
HMGCLL1-205ENST00000398661 CNFNQ9BYD5 112 aa7.79□□□□□ -1.16
HMGCLL1-205ENST00000398661 IGKV2-40A0A087WW87 121 aaPredicted RBP7.79□□□□□ -1.16
HMGCLL1-205ENST00000398661 ENSAO43768 121 aaKnown RBP7.79□□□□□ -1.16
HMGCLL1-205ENST00000398661 SNCGO76070 127 aa7.79□□□□□ -1.16
HMGCLL1-205ENST00000398661 IGKV1-17P01599 117 aa7.79□□□□□ -1.16
HMGCLL1-205ENST00000398661 IGKV2D-40P01614 121 aaPredicted RBP7.79□□□□□ -1.16
HMGCLL1-205ENST00000398661 IGHV1-8P0DP01 117 aa7.79□□□□□ -1.16
HMGCLL1-205ENST00000398661 IFITM1P13164 125 aa7.79□□□□□ -1.16
HMGCLL1-205ENST00000398661 LMO4P61968 165 aa7.79□□□□□ -1.16
HMGCLL1-205ENST00000398661 TMEM155Q4W5P6 130 aa7.79□□□□□ -1.16
HMGCLL1-205ENST00000398661 TTC32Q5I0X7 151 aa7.79□□□□□ -1.16
HMGCLL1-205ENST00000398661 TRAV12-1A0A0B4J245 112 aa7.78□□□□□ -1.16
HMGCLL1-205ENST00000398661 TRAV4A0A0B4J268 109 aa7.78□□□□□ -1.16
HMGCLL1-205ENST00000398661 DLX6P56179 175 aa7.78□□□□□ -1.16
HMGCLL1-205ENST00000398661 SRSF9Q13242 221 aaKnown RBP eCLIP7.78□□□□□ -1.16
HMGCLL1-205ENST00000398661 KAAG1Q9UBP8 84 aa7.78□□□□□ -1.16
HMGCLL1-205ENST00000398661 RNF223E7ERA6 249 aa7.78□□□□□ -1.16
HMGCLL1-205ENST00000398661 I3L2K1 104 aa7.78□□□□□ -1.16
HMGCLL1-205ENST00000398661 CLEC3BP05452 202 aa7.78□□□□□ -1.16
HMGCLL1-205ENST00000398661 ASIPP42127 132 aa7.78□□□□□ -1.16
HMGCLL1-205ENST00000398661 SRSF2Q01130 221 aaKnown RBP7.78□□□□□ -1.16
HMGCLL1-205ENST00000398661 C1orf122Q6ZSJ8 110 aa7.78□□□□□ -1.16
HMGCLL1-205ENST00000398661 OR11H6Q8NGC7 330 aa7.78□□□□□ -1.16
HMGCLL1-205ENST00000398661 CENPVL3A0A0U1RRI6 287 aa7.77□□□□□ -1.17
HMGCLL1-205ENST00000398661 ZNF815PA8K554 130 aa7.77□□□□□ -1.17
HMGCLL1-205ENST00000398661 TGFAP01135 160 aa7.77□□□□□ -1.17
HMGCLL1-205ENST00000398661 ORM1P02763 201 aa7.77□□□□□ -1.17
HMGCLL1-205ENST00000398661 CD7P09564 240 aa7.77□□□□□ -1.17
HMGCLL1-205ENST00000398661 PRTN3P24158 256 aa7.77□□□□□ -1.17
HMGCLL1-205ENST00000398661 PDE6HQ13956 83 aa7.77□□□□□ -1.17
HMGCLL1-205ENST00000398661 BRD3OSQ6XYD6 125 aa7.77□□□□□ -1.17
HMGCLL1-205ENST00000398661 PPP1R27Q86WC6 154 aa7.77□□□□□ -1.17
HMGCLL1-205ENST00000398661 PLEKHB2Q96CS7 222 aa7.77□□□□□ -1.17
HMGCLL1-205ENST00000398661 TRAV8-2A0A0B4J237 113 aa7.77□□□□□ -1.17
HMGCLL1-205ENST00000398661 CRLF1O75462 422 aa7.77□□□□□ -1.17
HMGCLL1-205ENST00000398661 SCGB1D4Q6XE38 83 aa7.77□□□□□ -1.17
HMGCLL1-205ENST00000398661 NDUFA11Q86Y39 141 aa7.77□□□□□ -1.17
HMGCLL1-205ENST00000398661 ZNF491Q8N8L2 437 aa7.77□□□□□ -1.17
HMGCLL1-205ENST00000398661 Q8TAT8 98 aa7.77□□□□□ -1.17
HMGCLL1-205ENST00000398661 PRADC1Q9BSG0 188 aa7.77□□□□□ -1.17
HMGCLL1-205ENST00000398661 HIF1ANQ9NWT6 349 aa7.77□□□□□ -1.17
HMGCLL1-205ENST00000398661 TEX22C9J3V5 150 aa7.76□□□□□ -1.17
HMGCLL1-205ENST00000398661 CNTFRP26992 372 aa7.76□□□□□ -1.17
HMGCLL1-205ENST00000398661 Q6Q795 121 aa7.76□□□□□ -1.17
HMGCLL1-205ENST00000398661 WFDC11Q8NEX6 87 aa7.76□□□□□ -1.17
HMGCLL1-205ENST00000398661 RNF125Q96EQ8 232 aa7.76□□□□□ -1.17
HMGCLL1-205ENST00000398661 F8P00451 2351 aa7.76□□□□□ -1.17
HMGCLL1-205ENST00000398661 SCGB1C2P0DMR2 95 aa7.76□□□□□ -1.17
HMGCLL1-205ENST00000398661 ARL3P36405 182 aa7.76□□□□□ -1.17
HMGCLL1-205ENST00000398661 FAM159AQ6UWV7 190 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms