RNA–Protein interactions for RNA: ENST00000398587.6

PCDHGA11-201, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA11, Length 4,647 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-201ENST00000398587 DLX4Q92988 240 aaPredicted RBP11.03□□□□□ -0.64
PCDHGA11-201ENST00000398587 TRBV25-1A0A075B6N4 114 aa11.03□□□□□ -0.64
PCDHGA11-201ENST00000398587 ODF3BA8MYP8 253 aa11.03□□□□□ -0.64
PCDHGA11-201ENST00000398587 K7EMT4 169 aa11.03□□□□□ -0.64
PCDHGA11-201ENST00000398587 ZNF124Q15973 351 aa11.03□□□□□ -0.64
PCDHGA11-201ENST00000398587 DEFB136Q30KP8 78 aa11.03□□□□□ -0.64
PCDHGA11-201ENST00000398587 CCL24O00175 119 aa11.02□□□□□ -0.64
PCDHGA11-201ENST00000398587 TSPAN13O95857 204 aa11.02□□□□□ -0.64
PCDHGA11-201ENST00000398587 PRORYQ9H606 182 aa11.02□□□□□ -0.64
PCDHGA11-201ENST00000398587 CFHR3Q02985 330 aa11.02□□□□□ -0.65
PCDHGA11-201ENST00000398587 C1orf229Q6ZS94 237 aaPredicted RBP11.02□□□□□ -0.65
PCDHGA11-201ENST00000398587 SPAG8Q99932 426 aaPredicted RBP11.02□□□□□ -0.65
PCDHGA11-201ENST00000398587 ZNF503Q96F45 646 aa11.01□□□□□ -0.65
PCDHGA11-201ENST00000398587 HIVEP3Q5T1R4 2406 aa11.01□□□□□ -0.65
PCDHGA11-201ENST00000398587 TRBV6-1A0A0K0K1D8 114 aa11.01□□□□□ -0.65
PCDHGA11-201ENST00000398587 TMEM89A2RUT3 159 aa11.01□□□□□ -0.65
PCDHGA11-201ENST00000398587 S100A7L2Q5SY68 101 aa11.01□□□□□ -0.65
PCDHGA11-201ENST00000398587 C11orf68Q9H3H3 251 aaKnown RBP11.01□□□□□ -0.65
PCDHGA11-201ENST00000398587 DAD1P61803 113 aa11.01□□□□□ -0.65
PCDHGA11-201ENST00000398587 GTSF1Q8WW33 167 aa11.01□□□□□ -0.65
PCDHGA11-201ENST00000398587 TMEM243Q9BU79 118 aa11.01□□□□□ -0.65
PCDHGA11-201ENST00000398587 PRAC2D3DTV9 90 aa11□□□□□ -0.65
PCDHGA11-201ENST00000398587 SLURP1P55000 103 aa11□□□□□ -0.65
PCDHGA11-201ENST00000398587 Q71RC1 249 aaPredicted RBP11□□□□□ -0.65
PCDHGA11-201ENST00000398587 GPHB5Q86YW7 130 aa11□□□□□ -0.65
PCDHGA11-201ENST00000398587 C9orf47Q6ZRZ4 202 aa11□□□□□ -0.65
PCDHGA11-201ENST00000398587 C10orf126Q8N4M7 172 aa11□□□□□ -0.65
PCDHGA11-201ENST00000398587 JPT2Q9H910 190 aa11□□□□□ -0.65
PCDHGA11-201ENST00000398587 IGHV3-38A0A0C4DH36 116 aa10.99□□□□□ -0.65
PCDHGA11-201ENST00000398587 NUPR1O60356 82 aa10.99□□□□□ -0.65
PCDHGA11-201ENST00000398587 DEFB121Q5J5C9 76 aa10.99□□□□□ -0.65
PCDHGA11-201ENST00000398587 MSRB1Q9NZV6 116 aa10.99□□□□□ -0.65
PCDHGA11-201ENST00000398587 LEPROTO15243 131 aa10.99□□□□□ -0.65
PCDHGA11-201ENST00000398587 APOC4P55056 127 aa10.99□□□□□ -0.65
PCDHGA11-201ENST00000398587 DKK2Q9UBU2 259 aa10.99□□□□□ -0.65
PCDHGA11-201ENST00000398587 GATA1P15976 413 aaPredicted RBP10.99□□□□□ -0.65
PCDHGA11-201ENST00000398587 RHOHQ15669 191 aa10.99□□□□□ -0.65
PCDHGA11-201ENST00000398587 A6NDX4 124 aa10.98□□□□□ -0.65
PCDHGA11-201ENST00000398587 F5H768 121 aa10.98□□□□□ -0.65
PCDHGA11-201ENST00000398587 C19orf84I3L1E1 186 aa10.97□□□□□ -0.65
PCDHGA11-201ENST00000398587 LURAP1LQ8IV03 231 aa10.97□□□□□ -0.65
PCDHGA11-201ENST00000398587 TNFRSF13BO14836 293 aaPredicted RBP10.97□□□□□ -0.65
PCDHGA11-201ENST00000398587 RNF152Q8N8N0 203 aa10.97□□□□□ -0.65
PCDHGA11-201ENST00000398587 ZNF625Q96I27 306 aaPredicted RBP10.97□□□□□ -0.65
PCDHGA11-201ENST00000398587 KIR2DL5BA0A0G2JN68 375 aa10.97□□□□□ -0.65
PCDHGA11-201ENST00000398587 KIR2DL5BA0A0G2JPC4 375 aa10.97□□□□□ -0.65
PCDHGA11-201ENST00000398587 KIR2DL5AQ8N109 375 aa10.97□□□□□ -0.65
PCDHGA11-201ENST00000398587 A0A1B0GV72 72 aa10.97□□□□□ -0.65
PCDHGA11-201ENST00000398587 SPRY2O43597 315 aa10.97□□□□□ -0.65
PCDHGA11-201ENST00000398587 IGHV4OR15-8A0A075B7B6 117 aa10.96□□□□□ -0.65
PCDHGA11-201ENST00000398587 A0A087WW49 117 aa10.96□□□□□ -0.65
PCDHGA11-201ENST00000398587 C19orf71A6NCJ1 209 aa10.96□□□□□ -0.65
PCDHGA11-201ENST00000398587 PRSS29PA6NIE9 313 aa10.96□□□□□ -0.65
PCDHGA11-201ENST00000398587 CDPF1Q6NVV7 123 aa10.96□□□□□ -0.65
PCDHGA11-201ENST00000398587 U3KQE9 123 aa10.96□□□□□ -0.65
PCDHGA11-201ENST00000398587 C2CD3Q4AC94 2353 aa10.96□□□□□ -0.65
PCDHGA11-201ENST00000398587 ANKRD11Q6UB99 2663 aaPredicted RBP10.96□□□□□ -0.65
PCDHGA11-201ENST00000398587 ABCA2Q9BZC7 2435 aa10.96□□□□□ -0.65
PCDHGA11-201ENST00000398587 C2orf70A6NJV1 201 aa10.96□□□□□ -0.66
PCDHGA11-201ENST00000398587 SIVA1O15304 175 aa10.96□□□□□ -0.66
PCDHGA11-201ENST00000398587 NDUFA12Q9UI09 145 aa10.96□□□□□ -0.66
PCDHGA11-201ENST00000398587 NACAE9PAV3 2078 aa10.96□□□□□ -0.66
PCDHGA11-201ENST00000398587 CTRLP40313 264 aa10.96□□□□□ -0.66
PCDHGA11-201ENST00000398587 GATD1Q8NB37 220 aa10.96□□□□□ -0.66
PCDHGA11-201ENST00000398587 TAL2Q16559 108 aa10.95□□□□□ -0.66
PCDHGA11-201ENST00000398587 CRYGBP07316 175 aa10.95□□□□□ -0.66
PCDHGA11-201ENST00000398587 LOXL1Q08397 574 aaPredicted RBP10.95□□□□□ -0.66
PCDHGA11-201ENST00000398587 MAJINQ3KP22 176 aa10.95□□□□□ -0.66
PCDHGA11-201ENST00000398587 SIGMAR1Q99720 223 aa10.95□□□□□ -0.66
PCDHGA11-201ENST00000398587 C9orf118A6NHY6 69 aa10.94□□□□□ -0.66
PCDHGA11-201ENST00000398587 J3QQQ9 107 aa10.94□□□□□ -0.66
PCDHGA11-201ENST00000398587 EBI3Q14213 229 aa10.94□□□□□ -0.66
PCDHGA11-201ENST00000398587 BVES-AS1Q5T3Y7 98 aa10.94□□□□□ -0.66
PCDHGA11-201ENST00000398587 TRAV8-4A0A0B4J246 113 aa10.94□□□□□ -0.66
PCDHGA11-201ENST00000398587 C2orf82Q6UX34 121 aa10.94□□□□□ -0.66
PCDHGA11-201ENST00000398587 CST9LQ9H4G1 147 aa10.94□□□□□ -0.66
PCDHGA11-201ENST00000398587 GAGE6Q13070 117 aa10.94□□□□□ -0.66
PCDHGA11-201ENST00000398587 UNQ9165/PRO28630Q6UXU0 137 aa10.94□□□□□ -0.66
PCDHGA11-201ENST00000398587 APRG1Q8IVJ8 170 aa10.94□□□□□ -0.66
PCDHGA11-201ENST00000398587 C11orf71Q6IPW1 123 aa10.94□□□□□ -0.66
PCDHGA11-201ENST00000398587 LY6LH3BQJ8 138 aa10.93□□□□□ -0.66
PCDHGA11-201ENST00000398587 PLA2G5P39877 138 aa10.93□□□□□ -0.66
PCDHGA11-201ENST00000398587 TNRC6AQ8NDV7 1962 aaKnown RBP10.93□□□□□ -0.66
PCDHGA11-201ENST00000398587 VWC2LB2RUY7 222 aa10.93□□□□□ -0.66
PCDHGA11-201ENST00000398587 CCDC140Q96MF4 163 aa10.93□□□□□ -0.66
PCDHGA11-201ENST00000398587 FRMD6-AS1P0C7T7 363 aa10.93□□□□□ -0.66
PCDHGA11-201ENST00000398587 RPL39LQ96EH5 51 aaKnown RBP10.93□□□□□ -0.66
PCDHGA11-201ENST00000398587 LINC01545Q5VT33 79 aa10.93□□□□□ -0.66
PCDHGA11-201ENST00000398587 OVOL2Q9BRP0 275 aa10.93□□□□□ -0.66
PCDHGA11-201ENST00000398587 NOP10Q9NPE3 64 aaKnown RBP10.93□□□□□ -0.66
PCDHGA11-201ENST00000398587 HCFC1P51610 2035 aa10.92□□□□□ -0.66
PCDHGA11-201ENST00000398587 MED14OSP0DP75 135 aa10.92□□□□□ -0.66
PCDHGA11-201ENST00000398587 IGLV2-8P01709 118 aa10.92□□□□□ -0.66
PCDHGA11-201ENST00000398587 HERVK_113P63121 156 aa10.92□□□□□ -0.66
PCDHGA11-201ENST00000398587 SUMO4Q6EEV6 95 aa10.92□□□□□ -0.66
PCDHGA11-201ENST00000398587 UBE2DNLQ8IWF7 75 aa10.92□□□□□ -0.66
PCDHGA11-201ENST00000398587 KIAA1549Q9HCM3 1950 aa10.92□□□□□ -0.66
PCDHGA11-201ENST00000398587 TRBV20-1A0A075B6N2 111 aa10.92□□□□□ -0.66
PCDHGA11-201ENST00000398587 LINC01548A6NM66 108 aa10.92□□□□□ -0.66
PCDHGA11-201ENST00000398587 TRBV12-3P01733 135 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms