RNA–Protein interactions for RNA: ENST00000398179.3

CCBE1-201, Transcript of collagen and calcium binding EGF domains 1, humanhuman

TSL 5 BASIC

Gene CCBE1, Length 5,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCBE1-201ENST00000398179 DKK1O94907 266 aa9.86□□□□□ -0.83
CCBE1-201ENST00000398179 IGHV3-33P01772 117 aa9.86□□□□□ -0.83
CCBE1-201ENST00000398179 TMEM167AQ8TBQ9 72 aa9.86□□□□□ -0.83
CCBE1-201ENST00000398179 EFNA4P52798 201 aa9.86□□□□□ -0.83
CCBE1-201ENST00000398179 REG3AQ06141 175 aa9.86□□□□□ -0.83
CCBE1-201ENST00000398179 PIKFYVEQ9Y2I7 2098 aa9.86□□□□□ -0.83
CCBE1-201ENST00000398179 HHLA3Q9XRX5 114 aa9.85□□□□□ -0.83
CCBE1-201ENST00000398179 HILS1P60008 231 aa9.85□□□□□ -0.83
CCBE1-201ENST00000398179 STRCP1A6NGW2 1772 aa9.85□□□□□ -0.83
CCBE1-201ENST00000398179 IGKV1-5P01602 117 aa9.85□□□□□ -0.83
CCBE1-201ENST00000398179 C9orf116Q5BN46 136 aaPredicted RBP9.85□□□□□ -0.83
CCBE1-201ENST00000398179 DCANP1Q8TF63 244 aa9.85□□□□□ -0.83
CCBE1-201ENST00000398179 SND1-IT1Q9HBX3 110 aa9.85□□□□□ -0.83
CCBE1-201ENST00000398179 C15orf32Q32M92 178 aa9.84□□□□□ -0.83
CCBE1-201ENST00000398179 C14orf178Q8N769 122 aaPredicted RBP9.84□□□□□ -0.83
CCBE1-201ENST00000398179 IGFL4Q6B9Z1 124 aa9.84□□□□□ -0.83
CCBE1-201ENST00000398179 IGKV1-12A0A0C4DH73 117 aa9.84□□□□□ -0.83
CCBE1-201ENST00000398179 IGKV1D-12P01611 117 aa9.84□□□□□ -0.83
CCBE1-201ENST00000398179 SEC61BP60468 96 aaKnown RBP9.84□□□□□ -0.83
CCBE1-201ENST00000398179 C10orf55Q5SWW7 151 aa9.84□□□□□ -0.83
CCBE1-201ENST00000398179 NFE4Q86UQ8 179 aa9.84□□□□□ -0.83
CCBE1-201ENST00000398179 TRGV4A0A0C4DH28 118 aa9.84□□□□□ -0.84
CCBE1-201ENST00000398179 TRPM6Q9BX84 2022 aa9.83□□□□□ -0.84
CCBE1-201ENST00000398179 C5orf67F2Z3F1 127 aa9.83□□□□□ -0.84
CCBE1-201ENST00000398179 PSME4Q14997 1843 aa9.83□□□□□ -0.84
CCBE1-201ENST00000398179 BRI3O95415 125 aa9.83□□□□□ -0.84
CCBE1-201ENST00000398179 LMO1P25800 156 aa9.83□□□□□ -0.84
CCBE1-201ENST00000398179 TTTY13Q9BZ97 58 aa9.83□□□□□ -0.84
CCBE1-201ENST00000398179 ZFAND3Q9H8U3 227 aa9.83□□□□□ -0.84
CCBE1-201ENST00000398179 HIGD2AQ9BW72 106 aa9.83□□□□□ -0.84
CCBE1-201ENST00000398179 Q9H8V8 135 aa9.83□□□□□ -0.84
CCBE1-201ENST00000398179 FGFBP3Q8TAT2 258 aa9.82□□□□□ -0.84
CCBE1-201ENST00000398179 IGKV4-1P06312 121 aa9.82□□□□□ -0.84
CCBE1-201ENST00000398179 COL8A2P25067 703 aa9.82□□□□□ -0.84
CCBE1-201ENST00000398179 SCN2AQ99250 2005 aa9.82□□□□□ -0.84
CCBE1-201ENST00000398179 UBR3Q6ZT12 1888 aa9.82□□□□□ -0.84
CCBE1-201ENST00000398179 A0A0J9YXY3 114 aa9.82□□□□□ -0.84
CCBE1-201ENST00000398179 LINC00208Q96KT6 92 aa9.82□□□□□ -0.84
CCBE1-201ENST00000398179 B9D2Q9BPU9 175 aa9.82□□□□□ -0.84
CCBE1-201ENST00000398179 NDUFA4O00483 81 aa9.82□□□□□ -0.84
CCBE1-201ENST00000398179 UBE2D1P51668 147 aa9.82□□□□□ -0.84
CCBE1-201ENST00000398179 A8MUN3 132 aa9.81□□□□□ -0.84
CCBE1-201ENST00000398179 RPL28P46779 137 aaKnown RBP9.81□□□□□ -0.84
CCBE1-201ENST00000398179 SPTBP11277 2137 aa9.81□□□□□ -0.84
CCBE1-201ENST00000398179 LINC01560Q8TB33 94 aa9.81□□□□□ -0.84
CCBE1-201ENST00000398179 MYO16Q9Y6X6 1858 aa9.81□□□□□ -0.84
CCBE1-201ENST00000398179 MLANAQ16655 118 aa9.81□□□□□ -0.84
CCBE1-201ENST00000398179 TM2D3Q9BRN9 247 aa9.81□□□□□ -0.84
CCBE1-201ENST00000398179 TRAV10A0A0B4J240 114 aa9.8□□□□□ -0.84
CCBE1-201ENST00000398179 RNASE3P12724 160 aaKnown RBP9.8□□□□□ -0.84
CCBE1-201ENST00000398179 LINC01554Q52M75 96 aa9.8□□□□□ -0.84
CCBE1-201ENST00000398179 IGKV1-27A0A075B6S5 117 aa9.8□□□□□ -0.84
CCBE1-201ENST00000398179 A0A0G2JRQ6 117 aa9.8□□□□□ -0.84
CCBE1-201ENST00000398179 KLHL30-AS1Q8NEE0 82 aa9.8□□□□□ -0.84
CCBE1-201ENST00000398179 SPRR3Q9UBC9 169 aa9.79□□□□□ -0.84
CCBE1-201ENST00000398179 IGHV4-28A0A0C4DH34 117 aa9.79□□□□□ -0.84
CCBE1-201ENST00000398179 Q6ZQY7 126 aa9.79□□□□□ -0.84
CCBE1-201ENST00000398179 KNTC1P50748 2209 aa9.79□□□□□ -0.84
CCBE1-201ENST00000398179 ZNF581Q9P0T4 197 aa9.79□□□□□ -0.84
CCBE1-201ENST00000398179 LINC00205P59089 165 aa9.79□□□□□ -0.84
CCBE1-201ENST00000398179 ARFGEF1Q9Y6D6 1849 aa9.78□□□□□ -0.84
CCBE1-201ENST00000398179 UBE2D3P61077 147 aa9.78□□□□□ -0.84
CCBE1-201ENST00000398179 Q0VFX4 171 aa9.78□□□□□ -0.84
CCBE1-201ENST00000398179 IGHV3-53P01767 116 aa9.78□□□□□ -0.84
CCBE1-201ENST00000398179 IGKV2D-26A0A0A0MRZ7 120 aa9.78□□□□□ -0.84
CCBE1-201ENST00000398179 C1orf158Q8N1D5 194 aa9.78□□□□□ -0.84
CCBE1-201ENST00000398179 SHANK3Q9BYB0 1731 aa9.77□□□□□ -0.84
CCBE1-201ENST00000398179 DOCK5Q9H7D0 1870 aa9.77□□□□□ -0.85
CCBE1-201ENST00000398179 TUBGCP6Q96RT7 1819 aa9.77□□□□□ -0.85
CCBE1-201ENST00000398179 NCR3O14931 201 aa9.76□□□□□ -0.85
CCBE1-201ENST00000398179 ODF3Q96PU9 254 aa9.76□□□□□ -0.85
CCBE1-201ENST00000398179 LINC00473A8K010 186 aa9.76□□□□□ -0.85
CCBE1-201ENST00000398179 SPRNQ5BIV9 151 aa9.76□□□□□ -0.85
CCBE1-201ENST00000398179 Q6ZRU5 148 aa9.76□□□□□ -0.85
CCBE1-201ENST00000398179 GGNQ86UU5 652 aa9.76□□□□□ -0.85
CCBE1-201ENST00000398179 HEATR5BQ9P2D3 2071 aa9.76□□□□□ -0.85
CCBE1-201ENST00000398179 RGPD3A6NKT7 1758 aaPredicted RBP9.76□□□□□ -0.85
CCBE1-201ENST00000398179 KIAA0087Q14695 138 aa9.76□□□□□ -0.85
CCBE1-201ENST00000398179 ANKRD36A6QL64 1941 aa9.75□□□□□ -0.85
CCBE1-201ENST00000398179 A0A087WVE0 104 aa9.75□□□□□ -0.85
CCBE1-201ENST00000398179 ZNF22P17026 224 aaPredicted RBP9.75□□□□□ -0.85
CCBE1-201ENST00000398179 CCL19Q99731 98 aa9.75□□□□□ -0.85
CCBE1-201ENST00000398179 XAGE1AQ9HD64 81 aa9.75□□□□□ -0.85
CCBE1-201ENST00000398179 TRBV10-1A0A0K0K1A3 114 aa9.75□□□□□ -0.85
CCBE1-201ENST00000398179 RUSC1-AS1Q66K80 236 aa9.75□□□□□ -0.85
CCBE1-201ENST00000398179 A6NDX4 124 aa9.74□□□□□ -0.85
CCBE1-201ENST00000398179 Q8N9W7 124 aa9.74□□□□□ -0.85
CCBE1-201ENST00000398179 IGHV3-30P01768 117 aa9.74□□□□□ -0.85
CCBE1-201ENST00000398179 IGHV3-30-5P0DP03 117 aa9.74□□□□□ -0.85
CCBE1-201ENST00000398179 CRIP2P52943 208 aaPredicted RBP9.74□□□□□ -0.85
CCBE1-201ENST00000398179 FOXL2NBQ6ZUU3 175 aa9.74□□□□□ -0.85
CCBE1-201ENST00000398179 MDC1Q14676 2089 aaKnown RBP9.74□□□□□ -0.85
CCBE1-201ENST00000398179 ZNF80P51504 273 aaPredicted RBP9.74□□□□□ -0.85
CCBE1-201ENST00000398179 TMEM263Q8WUH6 116 aaKnown RBP9.74□□□□□ -0.85
CCBE1-201ENST00000398179 C17orf100A8MU93 164 aa9.74□□□□□ -0.85
CCBE1-201ENST00000398179 TRGV1A0A0A0MS02 117 aa9.73□□□□□ -0.85
CCBE1-201ENST00000398179 GBF1Q92538 1859 aa9.73□□□□□ -0.85
CCBE1-201ENST00000398179 TP53BP1Q12888 1972 aaPredicted RBP9.73□□□□□ -0.85
CCBE1-201ENST00000398179 H0Y9J4 135 aa9.73□□□□□ -0.85
CCBE1-201ENST00000398179 PSPNO60542 156 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms