RNA–Protein interactions for RNA: ENST00000397761.6

PDLIM2-205, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PDLIM2, Length 1,491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-205ENST00000397761 CAMPP49913 170 aa14.16□□□□□ -0.14
PDLIM2-205ENST00000397761 KIR2DL5AQ8N109 375 aa14.16□□□□□ -0.14
PDLIM2-205ENST00000397761 KIR2DL5BQ8NHK3 375 aa14.16□□□□□ -0.14
PDLIM2-205ENST00000397761 LINC01587Q99440 93 aa14.16□□□□□ -0.14
PDLIM2-205ENST00000397761 TRAPPC1Q9Y5R8 145 aa14.16□□□□□ -0.14
PDLIM2-205ENST00000397761 LOC102724200A0A096LPH7 203 aaPredicted RBP14.15□□□□□ -0.14
PDLIM2-205ENST00000397761 C1orf196B1AJZ1 125 aa14.15□□□□□ -0.14
PDLIM2-205ENST00000397761 ZNF705AQ6ZN79 300 aaPredicted RBP14.15□□□□□ -0.14
PDLIM2-205ENST00000397761 MDFICQ9P1T7 246 aa14.15□□□□□ -0.14
PDLIM2-205ENST00000397761 MUC21A0A0G2JKD1 596 aa14.14□□□□□ -0.15
PDLIM2-205ENST00000397761 MUC21A0A140T8X8 626 aa14.14□□□□□ -0.15
PDLIM2-205ENST00000397761 CBY3A6NI87 242 aa14.14□□□□□ -0.15
PDLIM2-205ENST00000397761 A8MZ25 164 aa14.14□□□□□ -0.15
PDLIM2-205ENST00000397761 MRPL18Q9H0U6 180 aaKnown RBP14.14□□□□□ -0.15
PDLIM2-205ENST00000397761 MSRB1Q9NZV6 116 aa14.14□□□□□ -0.15
PDLIM2-205ENST00000397761 GOLT1BQ9Y3E0 138 aa14.14□□□□□ -0.15
PDLIM2-205ENST00000397761 RAB4BP61018 213 aa14.13□□□□□ -0.15
PDLIM2-205ENST00000397761 FABP9Q0Z7S8 132 aa14.13□□□□□ -0.15
PDLIM2-205ENST00000397761 C11orf72Q8NBR9 251 aa14.13□□□□□ -0.15
PDLIM2-205ENST00000397761 PHLDA3Q9Y5J5 127 aa14.13□□□□□ -0.15
PDLIM2-205ENST00000397761 IGHV4-30-4P0DP06 118 aa14.12□□□□□ -0.15
PDLIM2-205ENST00000397761 TWIST1Q15672 202 aa14.12□□□□□ -0.15
PDLIM2-205ENST00000397761 FRZBQ92765 325 aa14.12□□□□□ -0.15
PDLIM2-205ENST00000397761 TMEM208Q9BTX3 173 aa14.12□□□□□ -0.15
PDLIM2-205ENST00000397761 APOC4P55056 127 aa14.12□□□□□ -0.15
PDLIM2-205ENST00000397761 RAB5BP61020 215 aa14.12□□□□□ -0.15
PDLIM2-205ENST00000397761 SLAQ13239 276 aa14.12□□□□□ -0.15
PDLIM2-205ENST00000397761 DMRTA1Q5VZB9 504 aa14.12□□□□□ -0.15
PDLIM2-205ENST00000397761 TMEM191AQ9H0A3 160 aa14.12□□□□□ -0.15
PDLIM2-205ENST00000397761 NACAE9PAV3 2078 aa14.11□□□□□ -0.15
PDLIM2-205ENST00000397761 KPRPQ5T749 579 aaPredicted RBP14.11□□□□□ -0.15
PDLIM2-205ENST00000397761 SPANXN1Q5VSR9 72 aa14.11□□□□□ -0.15
PDLIM2-205ENST00000397761 ZFP82Q8N141 532 aa14.11□□□□□ -0.15
PDLIM2-205ENST00000397761 TMA7Q9Y2S6 64 aaKnown RBP14.11□□□□□ -0.15
PDLIM2-205ENST00000397761 TIMM8BQ9Y5J9 83 aaPredicted RBP14.11□□□□□ -0.15
PDLIM2-205ENST00000397761 APCSP02743 223 aa14.1□□□□□ -0.15
PDLIM2-205ENST00000397761 PRM2P04554 102 aa14.1□□□□□ -0.15
PDLIM2-205ENST00000397761 ZNF415Q09FC8 603 aa14.1□□□□□ -0.15
PDLIM2-205ENST00000397761 RNASE8Q8TDE3 154 aaKnown RBP14.1□□□□□ -0.15
PDLIM2-205ENST00000397761 PTH2Q96A98 100 aa14.1□□□□□ -0.15
PDLIM2-205ENST00000397761 NBEAL2Q6ZNJ1 2754 aa14.1□□□□□ -0.15
PDLIM2-205ENST00000397761 HIST1H2BKO60814 126 aa14.09□□□□□ -0.15
PDLIM2-205ENST00000397761 HIST1H2BJP06899 126 aa14.09□□□□□ -0.15
PDLIM2-205ENST00000397761 HIST1H2BOP23527 126 aa14.09□□□□□ -0.15
PDLIM2-205ENST00000397761 HIST1H2BBP33778 126 aa14.09□□□□□ -0.15
PDLIM2-205ENST00000397761 HIST1H2BDP58876 126 aa14.09□□□□□ -0.15
PDLIM2-205ENST00000397761 HIST1H2BCP62807 126 aa14.09□□□□□ -0.15
PDLIM2-205ENST00000397761 HIST2H2BEQ16778 126 aa14.09□□□□□ -0.15
PDLIM2-205ENST00000397761 HIST2H2BFQ5QNW6 126 aaPredicted RBP14.09□□□□□ -0.15
PDLIM2-205ENST00000397761 IL17DQ8TAD2 202 aa14.09□□□□□ -0.15
PDLIM2-205ENST00000397761 HIST1H2BHQ93079 126 aa14.09□□□□□ -0.15
PDLIM2-205ENST00000397761 HIST1H2BNQ99877 126 aa14.09□□□□□ -0.15
PDLIM2-205ENST00000397761 HIST1H2BMQ99879 126 aa14.09□□□□□ -0.15
PDLIM2-205ENST00000397761 M0R381 172 aa14.08□□□□□ -0.16
PDLIM2-205ENST00000397761 UBE2CO00762 179 aa14.08□□□□□ -0.16
PDLIM2-205ENST00000397761 SPRY2O43597 315 aa14.08□□□□□ -0.16
PDLIM2-205ENST00000397761 TRGC1P0CF51 173 aa14.08□□□□□ -0.16
PDLIM2-205ENST00000397761 HTN1P15515 57 aa14.08□□□□□ -0.16
PDLIM2-205ENST00000397761 AZU1P20160 251 aa14.08□□□□□ -0.16
PDLIM2-205ENST00000397761 SSTP61278 116 aa14.08□□□□□ -0.16
PDLIM2-205ENST00000397761 PIK3CD-AS1Q5SR53 167 aa14.08□□□□□ -0.16
PDLIM2-205ENST00000397761 FAM104BQ5XKR9 115 aa14.08□□□□□ -0.16
PDLIM2-205ENST00000397761 TMEM263Q8WUH6 116 aaKnown RBP14.08□□□□□ -0.16
PDLIM2-205ENST00000397761 IGHV3OR16-12A0A075B7B8 117 aa14.07□□□□□ -0.16
PDLIM2-205ENST00000397761 SPXQ9BT56 116 aa14.07□□□□□ -0.16
PDLIM2-205ENST00000397761 GSN-AS1Q9NRJ2 163 aa14.06□□□□□ -0.16
PDLIM2-205ENST00000397761 EVI2AP22794 236 aa14.06□□□□□ -0.16
PDLIM2-205ENST00000397761 SYT8Q8NBV8 401 aa14.06□□□□□ -0.16
PDLIM2-205ENST00000397761 RNF185Q96GF1 192 aa14.06□□□□□ -0.16
PDLIM2-205ENST00000397761 PLAC8L1A1L4L8 177 aa14.05□□□□□ -0.16
PDLIM2-205ENST00000397761 M0R2P5 195 aa14.05□□□□□ -0.16
PDLIM2-205ENST00000397761 KIAA1644Q3SXP7 199 aa14.05□□□□□ -0.16
PDLIM2-205ENST00000397761 AMN1Q8IY45 258 aa14.05□□□□□ -0.16
PDLIM2-205ENST00000397761 C16orf74Q96GX8 76 aa14.05□□□□□ -0.16
PDLIM2-205ENST00000397761 AP1S3Q96PC3 154 aa14.05□□□□□ -0.16
PDLIM2-205ENST00000397761 KIF25-AS1Q9Y6Z4 181 aa14.05□□□□□ -0.16
PDLIM2-205ENST00000397761 SMIM9A6NGZ8 99 aa14.04□□□□□ -0.16
PDLIM2-205ENST00000397761 RAB4AP20338 218 aa14.04□□□□□ -0.16
PDLIM2-205ENST00000397761 RRN3P1Q2M238 152 aa14.04□□□□□ -0.16
PDLIM2-205ENST00000397761 Q6ZWC4 215 aa14.04□□□□□ -0.16
PDLIM2-205ENST00000397761 SMIM15Q7Z3B0 74 aa14.04□□□□□ -0.16
PDLIM2-205ENST00000397761 RCHY1Q96PM5 261 aa14.04□□□□□ -0.16
PDLIM2-205ENST00000397761 NDUFAF3Q9BU61 184 aa14.04□□□□□ -0.16
PDLIM2-205ENST00000397761 U3KQK5 164 aa14.04□□□□□ -0.16
PDLIM2-205ENST00000397761 X6R8D5 127 aa14.04□□□□□ -0.16
PDLIM2-205ENST00000397761 ZNF876PQ49A33 203 aa14.03□□□□□ -0.16
PDLIM2-205ENST00000397761 POM121L12Q8N7R1 296 aa14.03□□□□□ -0.16
PDLIM2-205ENST00000397761 ALKBH7Q9BT30 221 aaPredicted RBP14.03□□□□□ -0.16
PDLIM2-205ENST00000397761 LINC00315P59091 139 aa14.02□□□□□ -0.16
PDLIM2-205ENST00000397761 DAZ2Q13117 558 aaKnown RBP14.02□□□□□ -0.16
PDLIM2-205ENST00000397761 MRPL51Q4U2R6 128 aaKnown RBP14.02□□□□□ -0.16
PDLIM2-205ENST00000397761 RASL10AQ92737 203 aa14.02□□□□□ -0.16
PDLIM2-205ENST00000397761 DPH3P1Q9H4G8 78 aa14.02□□□□□ -0.16
PDLIM2-205ENST00000397761 MEGF8Q7Z7M0 2845 aa14.01□□□□□ -0.17
PDLIM2-205ENST00000397761 SRIP30626 198 aa14.01□□□□□ -0.17
PDLIM2-205ENST00000397761 DEFB135Q30KP9 77 aa14.01□□□□□ -0.17
PDLIM2-205ENST00000397761 COA6Q5JTJ3 125 aaKnown RBP14□□□□□ -0.17
PDLIM2-205ENST00000397761 C14orf178Q8N769 122 aaPredicted RBP14□□□□□ -0.17
PDLIM2-205ENST00000397761 RNF183Q96D59 192 aa14□□□□□ -0.17
PDLIM2-205ENST00000397761 OVOL2Q9BRP0 275 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms