RNA–Protein interactions for RNA: ENST00000397760.8

PDLIM2-204, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-204ENST00000397760 PRELID3AQ96N28 172 aa14.46□□□□□ -0.09
PDLIM2-204ENST00000397760 TPPP3Q9BW30 176 aa14.46□□□□□ -0.09
PDLIM2-204ENST00000397760 FABP5P3A8MUU1 101 aa14.45□□□□□ -0.1
PDLIM2-204ENST00000397760 K7EQG2 157 aa14.45□□□□□ -0.1
PDLIM2-204ENST00000397760 SAP30O75446 220 aa14.45□□□□□ -0.1
PDLIM2-204ENST00000397760 PMCHL2Q9BQD1 86 aa14.45□□□□□ -0.1
PDLIM2-204ENST00000397760 D6R8Y8 96 aa14.45□□□□□ -0.1
PDLIM2-204ENST00000397760 ASCL2Q99929 193 aa14.45□□□□□ -0.1
PDLIM2-204ENST00000397760 SCRT2Q9NQ03 307 aa14.45□□□□□ -0.1
PDLIM2-204ENST00000397760 PPBPP02775 128 aa14.44□□□□□ -0.1
PDLIM2-204ENST00000397760 C3orf56Q8N813 242 aa14.44□□□□□ -0.1
PDLIM2-204ENST00000397760 VGLL1Q99990 258 aa14.44□□□□□ -0.1
PDLIM2-204ENST00000397760 ATRQ13535 2644 aa14.44□□□□□ -0.1
PDLIM2-204ENST00000397760 HINT1P49773 126 aaPredicted RBP14.43□□□□□ -0.1
PDLIM2-204ENST00000397760 LINC01559Q495D7 138 aa14.43□□□□□ -0.1
PDLIM2-204ENST00000397760 C12orf54Q6X4T0 127 aa14.43□□□□□ -0.1
PDLIM2-204ENST00000397760 FBN1P35555 2871 aaKnown RBP14.43□□□□□ -0.1
PDLIM2-204ENST00000397760 TRAV25A0A0B4J276 109 aa14.43□□□□□ -0.1
PDLIM2-204ENST00000397760 NPSP0C0P6 89 aa14.43□□□□□ -0.1
PDLIM2-204ENST00000397760 ZNF688P0C7X2 276 aa14.43□□□□□ -0.1
PDLIM2-204ENST00000397760 SNRPD3P62318 126 aaKnown RBP14.43□□□□□ -0.1
PDLIM2-204ENST00000397760 MRPL51Q4U2R6 128 aaKnown RBP14.43□□□□□ -0.1
PDLIM2-204ENST00000397760 WNK1Q9H4A3 2382 aa14.42□□□□□ -0.1
PDLIM2-204ENST00000397760 TRAV2A0A0B4J234 112 aa14.42□□□□□ -0.1
PDLIM2-204ENST00000397760 hDV102S1A0JD36 115 aa14.42□□□□□ -0.1
PDLIM2-204ENST00000397760 IFI27P40305 119 aaPredicted RBP14.42□□□□□ -0.1
PDLIM2-204ENST00000397760 ERCC8Q13216 396 aa14.42□□□□□ -0.1
PDLIM2-204ENST00000397760 AMN1Q8IY45 258 aa14.42□□□□□ -0.1
PDLIM2-204ENST00000397760 PPP1R14DQ9NXH3 145 aa14.42□□□□□ -0.1
PDLIM2-204ENST00000397760 COX11Q9Y6N1 276 aa14.42□□□□□ -0.1
PDLIM2-204ENST00000397760 ZNF80P51504 273 aaPredicted RBP14.41□□□□□ -0.1
PDLIM2-204ENST00000397760 PSMG4Q5JS54 123 aa14.41□□□□□ -0.1
PDLIM2-204ENST00000397760 TMSB15BA0A087X1C1 80 aa14.41□□□□□ -0.1
PDLIM2-204ENST00000397760 LINC01546A6NGU7 62 aa14.41□□□□□ -0.1
PDLIM2-204ENST00000397760 DEFB1P60022 68 aa14.41□□□□□ -0.1
PDLIM2-204ENST00000397760 HIST1H1AQ02539 215 aaPredicted RBP14.41□□□□□ -0.1
PDLIM2-204ENST00000397760 LGALS9BQ3B8N2 356 aa14.41□□□□□ -0.1
PDLIM2-204ENST00000397760 LGALS9CQ6DKI2 356 aa14.41□□□□□ -0.1
PDLIM2-204ENST00000397760 SPAG8Q99932 426 aaPredicted RBP14.41□□□□□ -0.1
PDLIM2-204ENST00000397760 TENM1Q9UKZ4 2725 aa14.4□□□□□ -0.1
PDLIM2-204ENST00000397760 A0A096LNJ9 63 aa14.4□□□□□ -0.1
PDLIM2-204ENST00000397760 CKS2P33552 79 aa14.4□□□□□ -0.1
PDLIM2-204ENST00000397760 TWIST1Q15672 202 aa14.4□□□□□ -0.1
PDLIM2-204ENST00000397760 SHISA2Q6UWI4 295 aa14.4□□□□□ -0.1
PDLIM2-204ENST00000397760 ZNF575Q86XF7 245 aa14.4□□□□□ -0.1
PDLIM2-204ENST00000397760 Q8TAT8 98 aa14.4□□□□□ -0.1
PDLIM2-204ENST00000397760 IGLV1-51P01701 117 aa14.39□□□□□ -0.11
PDLIM2-204ENST00000397760 HBDP02042 147 aa14.39□□□□□ -0.11
PDLIM2-204ENST00000397760 AGPAT4-IT1Q9H0P7 198 aa14.39□□□□□ -0.11
PDLIM2-204ENST00000397760 F6UB75 175 aa14.38□□□□□ -0.11
PDLIM2-204ENST00000397760 COX8AP10176 69 aa14.38□□□□□ -0.11
PDLIM2-204ENST00000397760 TMEM78Q5T7P6 136 aa14.38□□□□□ -0.11
PDLIM2-204ENST00000397760 OR10J6PQ8NGY7 276 aa14.38□□□□□ -0.11
PDLIM2-204ENST00000397760 ORM1P02763 201 aa14.38□□□□□ -0.11
PDLIM2-204ENST00000397760 C9orf47Q6ZRZ4 202 aa14.38□□□□□ -0.11
PDLIM2-204ENST00000397760 OR8A1Q8NGG7 326 aa14.38□□□□□ -0.11
PDLIM2-204ENST00000397760 OR2K2Q8NGT1 345 aa14.38□□□□□ -0.11
PDLIM2-204ENST00000397760 SPATA3Q8NHX4 192 aa14.38□□□□□ -0.11
PDLIM2-204ENST00000397760 ZNF256Q9Y2P7 627 aaPredicted RBP14.37□□□□□ -0.11
PDLIM2-204ENST00000397760 RNF185Q96GF1 192 aa14.36□□□□□ -0.11
PDLIM2-204ENST00000397760 LINC00477Q96M19 166 aa14.36□□□□□ -0.11
PDLIM2-204ENST00000397760 MAP1LC3AQ9H492 121 aa14.36□□□□□ -0.11
PDLIM2-204ENST00000397760 NXT2Q9NPJ8 142 aaKnown RBP14.36□□□□□ -0.11
PDLIM2-204ENST00000397760 LENEPQ9Y5L5 61 aa14.36□□□□□ -0.11
PDLIM2-204ENST00000397760 LOC389332A0A1B0GUA5 103 aa14.35□□□□□ -0.11
PDLIM2-204ENST00000397760 NPYP01303 97 aa14.35□□□□□ -0.11
PDLIM2-204ENST00000397760 DEFB131AP59861 70 aa14.35□□□□□ -0.11
PDLIM2-204ENST00000397760 MPV17L2Q567V2 206 aa14.35□□□□□ -0.11
PDLIM2-204ENST00000397760 BVES-AS1Q5T3Y7 98 aa14.35□□□□□ -0.11
PDLIM2-204ENST00000397760 UBE2V1Q13404 147 aa14.34□□□□□ -0.11
PDLIM2-204ENST00000397760 NUDT3O95989 172 aa14.34□□□□□ -0.11
PDLIM2-204ENST00000397760 INSL3P51460 131 aa14.34□□□□□ -0.11
PDLIM2-204ENST00000397760 C9orf66Q5T8R8 295 aa14.34□□□□□ -0.11
PDLIM2-204ENST00000397760 DEFB125Q8N687 156 aa14.34□□□□□ -0.11
PDLIM2-204ENST00000397760 WFDC9Q8NEX5 89 aa14.34□□□□□ -0.11
PDLIM2-204ENST00000397760 MAP6D1Q9H9H5 199 aa14.34□□□□□ -0.11
PDLIM2-204ENST00000397760 A0A0J9YX75 114 aa14.33□□□□□ -0.12
PDLIM2-204ENST00000397760 H0Y8G0 127 aa14.33□□□□□ -0.12
PDLIM2-204ENST00000397760 IFI27L1Q96BM0 104 aa14.33□□□□□ -0.12
PDLIM2-204ENST00000397760 NCR2O95944 276 aa14.32□□□□□ -0.12
PDLIM2-204ENST00000397760 FOXI2Q6ZQN5 318 aa14.32□□□□□ -0.12
PDLIM2-204ENST00000397760 MCRIP2Q9BUT9 160 aaKnown RBP14.32□□□□□ -0.12
PDLIM2-204ENST00000397760 TIMM8BQ9Y5J9 83 aaPredicted RBP14.32□□□□□ -0.12
PDLIM2-204ENST00000397760 IGHV4-4A0A075B6R2 117 aa14.31□□□□□ -0.12
PDLIM2-204ENST00000397760 PRSS47A8MTI9 375 aa14.31□□□□□ -0.12
PDLIM2-204ENST00000397760 PTTG1IPP53801 180 aa14.31□□□□□ -0.12
PDLIM2-204ENST00000397760 IGKV3D-20A0A0C4DH25 116 aa14.3□□□□□ -0.12
PDLIM2-204ENST00000397760 KNCNA6PVL3 124 aa14.3□□□□□ -0.12
PDLIM2-204ENST00000397760 SIVA1O15304 175 aa14.3□□□□□ -0.12
PDLIM2-204ENST00000397760 CACNG7P62955 275 aa14.3□□□□□ -0.12
PDLIM2-204ENST00000397760 ODF3L2Q3SX64 289 aa14.3□□□□□ -0.12
PDLIM2-204ENST00000397760 SMIM15Q7Z3B0 74 aa14.3□□□□□ -0.12
PDLIM2-204ENST00000397760 DUSP14O95147 198 aaKnown RBP14.29□□□□□ -0.12
PDLIM2-204ENST00000397760 FCER1GP30273 86 aa14.29□□□□□ -0.12
PDLIM2-204ENST00000397760 APRG1Q8IVJ8 170 aa14.29□□□□□ -0.12
PDLIM2-204ENST00000397760 MUC21A0A0G2JKD1 596 aa14.29□□□□□ -0.12
PDLIM2-204ENST00000397760 MUC21A0A140T8X8 626 aa14.29□□□□□ -0.12
PDLIM2-204ENST00000397760 TNFRSF6BO95407 300 aa14.29□□□□□ -0.12
PDLIM2-204ENST00000397760 SEC11AP67812 179 aa14.29□□□□□ -0.12
PDLIM2-204ENST00000397760 BEAN1Q3B7T3 259 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms