RNA–Protein interactions for RNA: ENST00000396610.6

CMC1-202, Transcript of C-X9-C motif containing 1, humanhuman

TSL 2

Gene CMC1, Length 593 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-202ENST00000396610 PRR15LQ9BU68 103 aa-0.07□□□□□ -2.42
CMC1-202ENST00000396610 CELSR1Q9NYQ6 3014 aa-0.07□□□□□ -2.42
CMC1-202ENST00000396610 HIVEP3Q5T1R4 2406 aa-0.07□□□□□ -2.42
CMC1-202ENST00000396610 KDM6BO15054 1643 aa-0.08□□□□□ -2.42
CMC1-202ENST00000396610 TRAV12-2A0A075B6T6 113 aa-0.08□□□□□ -2.42
CMC1-202ENST00000396610 F2Z2F3 143 aa-0.08□□□□□ -2.42
CMC1-202ENST00000396610 J3KT08 172 aa-0.08□□□□□ -2.42
CMC1-202ENST00000396610 MT-ND4LP03901 98 aa-0.08□□□□□ -2.42
CMC1-202ENST00000396610 AKR1D1P51857 326 aa-0.08□□□□□ -2.42
CMC1-202ENST00000396610 ELOF1P60002 83 aaKnown RBP-0.08□□□□□ -2.42
CMC1-202ENST00000396610 EMX2Q04743 252 aa-0.08□□□□□ -2.42
CMC1-202ENST00000396610 TAS2R8Q9NYW2 309 aa-0.08□□□□□ -2.42
CMC1-202ENST00000396610 NDUFAF1Q9Y375 327 aa-0.08□□□□□ -2.42
CMC1-202ENST00000396610 CADP27708 2225 aa-0.08□□□□□ -2.42
CMC1-202ENST00000396610 MED13LQ71F56 2210 aa-0.08□□□□□ -2.42
CMC1-202ENST00000396610 ZNF670-ZNF695F2Z2N8 137 aa-0.09□□□□□ -2.42
CMC1-202ENST00000396610 TSTD3H0UI37 97 aa-0.09□□□□□ -2.42
CMC1-202ENST00000396610 SMIM24O75264 130 aa-0.09□□□□□ -2.42
CMC1-202ENST00000396610 TMEM244Q5VVB8 128 aa-0.09□□□□□ -2.42
CMC1-202ENST00000396610 SLC35B3Q9H1N7 401 aa-0.09□□□□□ -2.42
CMC1-202ENST00000396610 DNAJC15Q9Y5T4 150 aa-0.09□□□□□ -2.42
CMC1-202ENST00000396610 SIPA1L2Q9P2F8 1722 aaPredicted RBP-0.1□□□□□ -2.42
CMC1-202ENST00000396610 AFDNP55196 1824 aaKnown RBP-0.1□□□□□ -2.43
CMC1-202ENST00000396610 OVOS2A0A0G2JMS6 1433 aa-0.1□□□□□ -2.43
CMC1-202ENST00000396610 SELENOSQ9BQE4 189 aa-0.1□□□□□ -2.43
CMC1-202ENST00000396610 HSPB11Q9Y547 144 aa-0.1□□□□□ -2.43
CMC1-202ENST00000396610 FER1L6Q2WGJ9 1857 aa-0.1□□□□□ -2.43
CMC1-202ENST00000396610 TRAV2A0A0B4J234 112 aa-0.11□□□□□ -2.43
CMC1-202ENST00000396610 A0A1B0GW64 132 aa-0.11□□□□□ -2.43
CMC1-202ENST00000396610 GINS2Q9Y248 185 aa-0.11□□□□□ -2.43
CMC1-202ENST00000396610 AHCTF1Q8WYP5 2266 aa-0.11□□□□□ -2.43
CMC1-202ENST00000396610 TANC1Q9C0D5 1861 aa-0.12□□□□□ -2.43
CMC1-202ENST00000396610 CELSR2Q9HCU4 2923 aa-0.12□□□□□ -2.43
CMC1-202ENST00000396610 TRAV36DV7A0A075B6V5 113 aa-0.12□□□□□ -2.43
CMC1-202ENST00000396610 HLA-DRB4P13762 266 aa-0.12□□□□□ -2.43
CMC1-202ENST00000396610 CMPK1P30085 196 aa-0.12□□□□□ -2.43
CMC1-202ENST00000396610 COX6A2Q02221 97 aa-0.12□□□□□ -2.43
CMC1-202ENST00000396610 SNX29P2Q8IUI4 249 aa-0.12□□□□□ -2.43
CMC1-202ENST00000396610 FAM213BQ8TBF2 198 aa-0.12□□□□□ -2.43
CMC1-202ENST00000396610 BPESC1Q9GZL8 116 aa-0.12□□□□□ -2.43
CMC1-202ENST00000396610 HLA-DRB4X5D2U9 266 aa-0.12□□□□□ -2.43
CMC1-202ENST00000396610 F5P12259 2224 aa-0.12□□□□□ -2.43
CMC1-202ENST00000396610 ARHGAP31Q2M1Z3 1444 aa-0.13□□□□□ -2.43
CMC1-202ENST00000396610 A0A1B0GX51 115 aa-0.13□□□□□ -2.43
CMC1-202ENST00000396610 TCRBV3S1A0A5B6 114 aa-0.13□□□□□ -2.43
CMC1-202ENST00000396610 RBAKDNA6NC62 111 aa-0.13□□□□□ -2.43
CMC1-202ENST00000396610 DEGS1O15121 323 aa-0.13□□□□□ -2.43
CMC1-202ENST00000396610 TNFSF15O95150 251 aa-0.13□□□□□ -2.43
CMC1-202ENST00000396610 SLC25A6P12236 298 aa-0.13□□□□□ -2.43
CMC1-202ENST00000396610 OR8B8Q15620 311 aa-0.13□□□□□ -2.43
CMC1-202ENST00000396610 OR2T2Q6IF00 324 aa-0.13□□□□□ -2.43
CMC1-202ENST00000396610 TCTE3Q8IZS6 198 aa-0.13□□□□□ -2.43
CMC1-202ENST00000396610 ATP6V0E2Q8NHE4 81 aa-0.13□□□□□ -2.43
CMC1-202ENST00000396610 DYNLRB2Q8TF09 96 aa-0.13□□□□□ -2.43
CMC1-202ENST00000396610 BANF2Q9H503 90 aa-0.13□□□□□ -2.43
CMC1-202ENST00000396610 NOP16Q9Y3C1 178 aaKnown RBP-0.13□□□□□ -2.43
CMC1-202ENST00000396610 LRP5O75197 1615 aa-0.13□□□□□ -2.43
CMC1-202ENST00000396610 KIDINS220Q9ULH0 1771 aa-0.14□□□□□ -2.43
CMC1-202ENST00000396610 RREB1Q92766 1687 aa-0.14□□□□□ -2.43
CMC1-202ENST00000396610 RBP4P02753 201 aa-0.14□□□□□ -2.43
CMC1-202ENST00000396610 SCTP09683 121 aa-0.14□□□□□ -2.43
CMC1-202ENST00000396610 NDUFA11Q86Y39 141 aa-0.14□□□□□ -2.43
CMC1-202ENST00000396610 HIGD1AQ9Y241 93 aa-0.14□□□□□ -2.43
CMC1-202ENST00000396610 NSD1Q96L73 2696 aaPredicted RBP-0.14□□□□□ -2.43
CMC1-202ENST00000396610 DLEC1Q9Y238 1755 aa-0.14□□□□□ -2.43
CMC1-202ENST00000396610 MYH1P12882 1939 aa-0.15□□□□□ -2.43
CMC1-202ENST00000396610 BORCS7-ASMTA0A0B4J1R7 106 aa-0.15□□□□□ -2.43
CMC1-202ENST00000396610 CLLU1Q5K131 121 aa-0.15□□□□□ -2.43
CMC1-202ENST00000396610 ATP11AUNQ6ZP68 121 aa-0.15□□□□□ -2.43
CMC1-202ENST00000396610 MAGOHBQ96A72 148 aaKnown RBP-0.15□□□□□ -2.43
CMC1-202ENST00000396610 IFI27L1Q96BM0 104 aa-0.15□□□□□ -2.43
CMC1-202ENST00000396610 U3KQA8 63 aa-0.15□□□□□ -2.43
CMC1-202ENST00000396610 SOGA1O94964 1423 aa-0.15□□□□□ -2.43
CMC1-202ENST00000396610 PBRM1Q86U86 1689 aa-0.15□□□□□ -2.43
CMC1-202ENST00000396610 CCDC171Q6TFL3 1326 aa-0.15□□□□□ -2.43
CMC1-202ENST00000396610 HELZP42694 1942 aaKnown RBP-0.16□□□□□ -2.43
CMC1-202ENST00000396610 GVQW2A0A096LPI5 108 aaPredicted RBP-0.16□□□□□ -2.44
CMC1-202ENST00000396610 GNG14A0A1W2PPG7 69 aa-0.16□□□□□ -2.44
CMC1-202ENST00000396610 H0YJX3 145 aa-0.16□□□□□ -2.44
CMC1-202ENST00000396610 YPEL1O60688 119 aa-0.16□□□□□ -2.44
CMC1-202ENST00000396610 NBEAP1P0C6P0 100 aa-0.16□□□□□ -2.44
CMC1-202ENST00000396610 CYP2G1PQ6ZSU1 146 aa-0.16□□□□□ -2.44
CMC1-202ENST00000396610 SPANXCQ9NY87 97 aa-0.16□□□□□ -2.44
CMC1-202ENST00000396610 ERG28Q9UKR5 140 aa-0.16□□□□□ -2.44
CMC1-202ENST00000396610 ABCA2Q9BZC7 2435 aa-0.16□□□□□ -2.44
CMC1-202ENST00000396610 WDR97A6NE52 1622 aa-0.16□□□□□ -2.44
CMC1-202ENST00000396610 NMBP08949 121 aa-0.17□□□□□ -2.44
CMC1-202ENST00000396610 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa-0.17□□□□□ -2.44
CMC1-202ENST00000396610 SPANXA1Q9NS26 97 aa-0.17□□□□□ -2.44
CMC1-202ENST00000396610 CDK13Q14004 1512 aaKnown RBP-0.18□□□□□ -2.44
CMC1-202ENST00000396610 CHD9Q3L8U1 2897 aa-0.18□□□□□ -2.44
CMC1-202ENST00000396610 COX4I1P13073 169 aa-0.18□□□□□ -2.44
CMC1-202ENST00000396610 SSBP1Q04837 148 aaKnown RBP-0.18□□□□□ -2.44
CMC1-202ENST00000396610 C4orf33Q8N1A6 199 aa-0.18□□□□□ -2.44
CMC1-202ENST00000396610 SMIM11BQ8TCY0 68 aa-0.18□□□□□ -2.44
CMC1-202ENST00000396610 KIAA0100Q14667 2235 aaKnown RBP-0.18□□□□□ -2.44
CMC1-202ENST00000396610 A0A087WTM6 91 aa-0.19□□□□□ -2.44
CMC1-202ENST00000396610 APODP05090 189 aa-0.19□□□□□ -2.44
CMC1-202ENST00000396610 CCL3L1P16619 93 aa-0.19□□□□□ -2.44
CMC1-202ENST00000396610 CCDC153Q494R4 210 aa-0.19□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms