RNA–Protein interactions for RNA: ENST00000396551.7

TRIM39-205, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,249 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-205ENST00000396551 MYOZ3Q8TDC0 251 aa12.41□□□□□ -0.42
TRIM39-205ENST00000396551 PHLDA3Q9Y5J5 127 aa12.41□□□□□ -0.42
TRIM39-205ENST00000396551 PTPN13Q12923 2485 aa12.4□□□□□ -0.42
TRIM39-205ENST00000396551 C14orf178Q8N769 122 aaPredicted RBP12.4□□□□□ -0.42
TRIM39-205ENST00000396551 BEX4Q9NWD9 120 aaPredicted RBP12.4□□□□□ -0.42
TRIM39-205ENST00000396551 MXRA5Q9NR99 2828 aa12.4□□□□□ -0.43
TRIM39-205ENST00000396551 IGHV4OR15-8A0A075B7B6 117 aa12.39□□□□□ -0.43
TRIM39-205ENST00000396551 A0A087WW49 117 aa12.39□□□□□ -0.43
TRIM39-205ENST00000396551 HOXA3O43365 443 aaPredicted RBP12.39□□□□□ -0.43
TRIM39-205ENST00000396551 LAGE3Q14657 143 aa12.39□□□□□ -0.43
TRIM39-205ENST00000396551 RASL10AQ92737 203 aa12.39□□□□□ -0.43
TRIM39-205ENST00000396551 COX11Q9Y6N1 276 aa12.39□□□□□ -0.43
TRIM39-205ENST00000396551 PRRC2AP48634 2157 aaKnown RBP12.39□□□□□ -0.43
TRIM39-205ENST00000396551 LGALS1P09382 135 aaKnown RBP12.39□□□□□ -0.43
TRIM39-205ENST00000396551 SMIM17P0DL12 118 aa12.39□□□□□ -0.43
TRIM39-205ENST00000396551 DEFB113Q30KQ7 82 aa12.39□□□□□ -0.43
TRIM39-205ENST00000396551 DPH3P1Q9H4G8 78 aa12.39□□□□□ -0.43
TRIM39-205ENST00000396551 ZMAT4Q9H898 229 aa12.39□□□□□ -0.43
TRIM39-205ENST00000396551 ZNF688P0C7X2 276 aa12.39□□□□□ -0.43
TRIM39-205ENST00000396551 SYNJ2BPP57105 145 aa12.39□□□□□ -0.43
TRIM39-205ENST00000396551 ERASQ7Z444 233 aa12.39□□□□□ -0.43
TRIM39-205ENST00000396551 ORAOV1Q8WV07 137 aa12.39□□□□□ -0.43
TRIM39-205ENST00000396551 SMIM2Q9BVW6 85 aa12.38□□□□□ -0.43
TRIM39-205ENST00000396551 BOD1L2Q8IYS8 172 aa12.38□□□□□ -0.43
TRIM39-205ENST00000396551 OR4C5Q8NGB2 326 aa12.38□□□□□ -0.43
TRIM39-205ENST00000396551 RPL39LQ96EH5 51 aaKnown RBP12.38□□□□□ -0.43
TRIM39-205ENST00000396551 ELANEP08246 267 aa12.37□□□□□ -0.43
TRIM39-205ENST00000396551 PSMG4Q5JS54 123 aa12.37□□□□□ -0.43
TRIM39-205ENST00000396551 SAMD13Q5VXD3 122 aa12.37□□□□□ -0.43
TRIM39-205ENST00000396551 C12orf54Q6X4T0 127 aa12.37□□□□□ -0.43
TRIM39-205ENST00000396551 PRSS1P07477 247 aa12.37□□□□□ -0.43
TRIM39-205ENST00000396551 DUX5Q96PT3 197 aa12.37□□□□□ -0.43
TRIM39-205ENST00000396551 FOXC2Q99958 501 aa12.37□□□□□ -0.43
TRIM39-205ENST00000396551 K7EQG2 157 aa12.37□□□□□ -0.43
TRIM39-205ENST00000396551 NXPH4O95158 308 aa12.37□□□□□ -0.43
TRIM39-205ENST00000396551 HHLA3Q9XRX5 114 aa12.36□□□□□ -0.43
TRIM39-205ENST00000396551 ABCA12Q86UK0 2595 aa12.36□□□□□ -0.43
TRIM39-205ENST00000396551 TRAV12-3A0A0B4J271 114 aa12.36□□□□□ -0.43
TRIM39-205ENST00000396551 MGPP08493 103 aa12.36□□□□□ -0.43
TRIM39-205ENST00000396551 SHISA2Q6UWI4 295 aa12.36□□□□□ -0.43
TRIM39-205ENST00000396551 AGRNO00468 2067 aa12.36□□□□□ -0.43
TRIM39-205ENST00000396551 TAX1BP3O14907 124 aa12.35□□□□□ -0.43
TRIM39-205ENST00000396551 HOXD3P31249 432 aaPredicted RBP12.35□□□□□ -0.43
TRIM39-205ENST00000396551 PCP2Q8IVA1 136 aa12.35□□□□□ -0.43
TRIM39-205ENST00000396551 A0A0J9YX75 114 aa12.35□□□□□ -0.43
TRIM39-205ENST00000396551 LGALS9O00182 355 aa12.35□□□□□ -0.43
TRIM39-205ENST00000396551 SUMO2P61956 95 aaKnown RBP12.35□□□□□ -0.43
TRIM39-205ENST00000396551 KRTAP1-3Q8IUG1 177 aa12.35□□□□□ -0.43
TRIM39-205ENST00000396551 UBE2E2Q96LR5 201 aa12.35□□□□□ -0.43
TRIM39-205ENST00000396551 Q96MF0 132 aa12.35□□□□□ -0.43
TRIM39-205ENST00000396551 FAM159AQ6UWV7 190 aa12.35□□□□□ -0.43
TRIM39-205ENST00000396551 LRRC75A-AS1Q8N1F1 130 aa12.35□□□□□ -0.43
TRIM39-205ENST00000396551 RNF152Q8N8N0 203 aa12.35□□□□□ -0.43
TRIM39-205ENST00000396551 AP1S3Q96PC3 154 aa12.35□□□□□ -0.43
TRIM39-205ENST00000396551 KIF25-AS1Q9Y6Z4 181 aa12.35□□□□□ -0.43
TRIM39-205ENST00000396551 ATP5LO75964 103 aa12.34□□□□□ -0.43
TRIM39-205ENST00000396551 LINC00315P59091 139 aa12.34□□□□□ -0.43
TRIM39-205ENST00000396551 C18orf65Q6ZTR6 163 aa12.34□□□□□ -0.43
TRIM39-205ENST00000396551 TEX15Q9BXT5 2789 aa12.34□□□□□ -0.43
TRIM39-205ENST00000396551 C7orf71A4D174 169 aa12.34□□□□□ -0.43
TRIM39-205ENST00000396551 IGKV3-20P01619 116 aa12.34□□□□□ -0.43
TRIM39-205ENST00000396551 NMUP48645 174 aa12.34□□□□□ -0.43
TRIM39-205ENST00000396551 SCGB2A2Q13296 93 aa12.34□□□□□ -0.43
TRIM39-205ENST00000396551 POM121L12Q8N7R1 296 aa12.34□□□□□ -0.43
TRIM39-205ENST00000396551 IGKV2D-26A0A0A0MRZ7 120 aa12.33□□□□□ -0.43
TRIM39-205ENST00000396551 ADAMTSL5Q6ZMM2 481 aa12.33□□□□□ -0.43
TRIM39-205ENST00000396551 C20orf78Q9BR46 151 aa12.33□□□□□ -0.43
TRIM39-205ENST00000396551 JPT2Q9H910 190 aa12.33□□□□□ -0.43
TRIM39-205ENST00000396551 ZNF469Q96JG9 3925 aaPredicted RBP12.33□□□□□ -0.44
TRIM39-205ENST00000396551 IGKCP01834 107 aa12.33□□□□□ -0.44
TRIM39-205ENST00000396551 ODF3Q96PU9 254 aa12.33□□□□□ -0.44
TRIM39-205ENST00000396551 NAV2Q8IVL1 2488 aa12.33□□□□□ -0.44
TRIM39-205ENST00000396551 TRAV12-2A0A075B6T6 113 aa12.33□□□□□ -0.44
TRIM39-205ENST00000396551 K7EP13 123 aa12.33□□□□□ -0.44
TRIM39-205ENST00000396551 SNRPD3P62318 126 aaKnown RBP12.33□□□□□ -0.44
TRIM39-205ENST00000396551 CD7P09564 240 aa12.32□□□□□ -0.44
TRIM39-205ENST00000396551 TMEM97Q5BJF2 176 aa12.32□□□□□ -0.44
TRIM39-205ENST00000396551 MRPL35Q9NZE8 188 aaKnown RBP12.32□□□□□ -0.44
TRIM39-205ENST00000396551 DPM2O94777 84 aa12.31□□□□□ -0.44
TRIM39-205ENST00000396551 DEFB136Q30KP8 78 aa12.31□□□□□ -0.44
TRIM39-205ENST00000396551 SLURP1P55000 103 aa12.3□□□□□ -0.44
TRIM39-205ENST00000396551 Q8N2B8 174 aa12.3□□□□□ -0.44
TRIM39-205ENST00000396551 OR9G4Q8NGQ1 327 aa12.3□□□□□ -0.44
TRIM39-205ENST00000396551 TTTY13Q9BZ97 58 aa12.3□□□□□ -0.44
TRIM39-205ENST00000396551 ORMDL2Q53FV1 153 aa12.3□□□□□ -0.44
TRIM39-205ENST00000396551 TOMM6Q96B49 74 aa12.3□□□□□ -0.44
TRIM39-205ENST00000396551 A0A087WX48 190 aa12.3□□□□□ -0.44
TRIM39-205ENST00000396551 SIVA1O15304 175 aa12.3□□□□□ -0.44
TRIM39-205ENST00000396551 GTSCR1Q86UQ5 136 aa12.3□□□□□ -0.44
TRIM39-205ENST00000396551 IGHV3-16A0A0C4DH30 117 aa12.29□□□□□ -0.44
TRIM39-205ENST00000396551 SPINK13Q1W4C9 94 aa12.29□□□□□ -0.44
TRIM39-205ENST00000396551 C9orf85Q96MD7 179 aa12.29□□□□□ -0.44
TRIM39-205ENST00000396551 TMEM160Q9NX00 188 aa12.29□□□□□ -0.44
TRIM39-205ENST00000396551 SORL1Q92673 2214 aa12.29□□□□□ -0.44
TRIM39-205ENST00000396551 CREBBPQ92793 2442 aa12.29□□□□□ -0.44
TRIM39-205ENST00000396551 APCP25054 2843 aa12.29□□□□□ -0.44
TRIM39-205ENST00000396551 NBPF19A0A087WUL8 3843 aa12.29□□□□□ -0.44
TRIM39-205ENST00000396551 UBE2V1Q13404 147 aa12.29□□□□□ -0.44
TRIM39-205ENST00000396551 OCIAD2Q56VL3 154 aa12.29□□□□□ -0.44
TRIM39-205ENST00000396551 TCTEX1D4Q5JR98 221 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 194.9 ms