RNA–Protein interactions for RNA: ENST00000395354.1

LMNB1-202, Transcript of lamin B1, humanhuman

TSL 1 (best) BASIC

Gene LMNB1, Length 1,572 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-202ENST00000395354 PYY3Q5JQD4 70 aa14.24□□□□□ -0.13
LMNB1-202ENST00000395354 SMIM15Q7Z3B0 74 aa14.24□□□□□ -0.13
LMNB1-202ENST00000395354 AMN1Q8IY45 258 aa14.24□□□□□ -0.13
LMNB1-202ENST00000395354 OR10AG1Q8NH19 301 aa14.24□□□□□ -0.13
LMNB1-202ENST00000395354 CLUHP3Q96NS8 147 aa14.24□□□□□ -0.13
LMNB1-202ENST00000395354 SAMD10Q9BYL1 202 aa14.24□□□□□ -0.13
LMNB1-202ENST00000395354 SCRT2Q9NQ03 307 aa14.24□□□□□ -0.13
LMNB1-202ENST00000395354 H3BVH4 76 aa14.23□□□□□ -0.13
LMNB1-202ENST00000395354 CMC4P56277 68 aaPredicted RBP14.23□□□□□ -0.13
LMNB1-202ENST00000395354 SSTP61278 116 aa14.23□□□□□ -0.13
LMNB1-202ENST00000395354 SPANXN1Q5VSR9 72 aa14.23□□□□□ -0.13
LMNB1-202ENST00000395354 CHCHD1Q96BP2 118 aaKnown RBP14.23□□□□□ -0.13
LMNB1-202ENST00000395354 MSRB1Q9NZV6 116 aa14.23□□□□□ -0.13
LMNB1-202ENST00000395354 G3V4G9 280 aa14.22□□□□□ -0.13
LMNB1-202ENST00000395354 IGKV3-20P01619 116 aa14.22□□□□□ -0.13
LMNB1-202ENST00000395354 PPBPP02775 128 aa14.22□□□□□ -0.13
LMNB1-202ENST00000395354 JOSD1Q15040 202 aaPredicted RBP14.22□□□□□ -0.13
LMNB1-202ENST00000395354 MRPL51Q4U2R6 128 aaKnown RBP14.22□□□□□ -0.13
LMNB1-202ENST00000395354 ORMDL3Q8N138 153 aa14.22□□□□□ -0.13
LMNB1-202ENST00000395354 NOTCH1P46531 2555 aa14.22□□□□□ -0.13
LMNB1-202ENST00000395354 TRAV12-3A0A0B4J271 114 aa14.22□□□□□ -0.13
LMNB1-202ENST00000395354 KNCNA6PVL3 124 aa14.22□□□□□ -0.13
LMNB1-202ENST00000395354 NIT1Q86X76 327 aa14.22□□□□□ -0.13
LMNB1-202ENST00000395354 M0R2Z0 102 aa14.21□□□□□ -0.14
LMNB1-202ENST00000395354 RAB4AP20338 218 aa14.21□□□□□ -0.14
LMNB1-202ENST00000395354 SPINK13Q1W4C9 94 aa14.21□□□□□ -0.14
LMNB1-202ENST00000395354 SAMD5Q5TGI4 173 aa14.21□□□□□ -0.14
LMNB1-202ENST00000395354 RNF185Q96GF1 192 aa14.21□□□□□ -0.14
LMNB1-202ENST00000395354 DNHD1Q96M86 4753 aa14.2□□□□□ -0.14
LMNB1-202ENST00000395354 D6R8Y8 96 aa14.2□□□□□ -0.14
LMNB1-202ENST00000395354 GNRH2O43555 120 aa14.2□□□□□ -0.14
LMNB1-202ENST00000395354 HSBP1O75506 76 aa14.2□□□□□ -0.14
LMNB1-202ENST00000395354 RNASE3P12724 160 aaKnown RBP14.2□□□□□ -0.14
LMNB1-202ENST00000395354 AMTP48728 403 aa14.2□□□□□ -0.14
LMNB1-202ENST00000395354 PRELID3AQ96N28 172 aa14.2□□□□□ -0.14
LMNB1-202ENST00000395354 LAMTOR2Q9Y2Q5 125 aa14.2□□□□□ -0.14
LMNB1-202ENST00000395354 NBEAL1Q6ZS30 2694 aa14.19□□□□□ -0.14
LMNB1-202ENST00000395354 LINC00614P0C842 121 aa14.19□□□□□ -0.14
LMNB1-202ENST00000395354 RNASEKQ6P5S7 137 aaKnown RBP14.19□□□□□ -0.14
LMNB1-202ENST00000395354 PHLDA3Q9Y5J5 127 aa14.19□□□□□ -0.14
LMNB1-202ENST00000395354 NXPH4O95158 308 aa14.18□□□□□ -0.14
LMNB1-202ENST00000395354 PMCHP20382 165 aa14.18□□□□□ -0.14
LMNB1-202ENST00000395354 CKS2P33552 79 aa14.18□□□□□ -0.14
LMNB1-202ENST00000395354 URB1-AS1Q96HZ7 61 aa14.18□□□□□ -0.14
LMNB1-202ENST00000395354 FAM110AQ9BQ89 295 aa14.18□□□□□ -0.14
LMNB1-202ENST00000395354 NIT2Q9NQR4 276 aa14.18□□□□□ -0.14
LMNB1-202ENST00000395354 TRAV12-2A0A075B6T6 113 aa14.17□□□□□ -0.14
LMNB1-202ENST00000395354 IGHV1OR15-1A0A075B7D0 117 aa14.17□□□□□ -0.14
LMNB1-202ENST00000395354 EGFEM1PQ0D2K5 195 aa14.17□□□□□ -0.14
LMNB1-202ENST00000395354 ODF3L2Q3SX64 289 aa14.17□□□□□ -0.14
LMNB1-202ENST00000395354 ZMAT5Q9UDW3 170 aaKnown RBP14.17□□□□□ -0.14
LMNB1-202ENST00000395354 CMYA5Q8N3K9 4069 aa14.17□□□□□ -0.14
LMNB1-202ENST00000395354 CD7P09564 240 aa14.17□□□□□ -0.14
LMNB1-202ENST00000395354 KRTAP10-11P60412 298 aa14.17□□□□□ -0.14
LMNB1-202ENST00000395354 OR11H12B2RN74 326 aa14.16□□□□□ -0.14
LMNB1-202ENST00000395354 EVI2AP22794 236 aa14.16□□□□□ -0.14
LMNB1-202ENST00000395354 BEAN1Q3B7T3 259 aa14.16□□□□□ -0.14
LMNB1-202ENST00000395354 Q6ZWC4 215 aa14.16□□□□□ -0.14
LMNB1-202ENST00000395354 C20orf144Q9BQM9 153 aa14.16□□□□□ -0.14
LMNB1-202ENST00000395354 TIMM8BQ9Y5J9 83 aaPredicted RBP14.16□□□□□ -0.14
LMNB1-202ENST00000395354 IGHV3-16A0A0C4DH30 117 aa14.15□□□□□ -0.14
LMNB1-202ENST00000395354 RBMY1BA6NDE4 496 aaKnown RBP14.15□□□□□ -0.14
LMNB1-202ENST00000395354 RBMY1EA6NEQ0 496 aaKnown RBP14.15□□□□□ -0.14
LMNB1-202ENST00000395354 CRXO43186 299 aaPredicted RBP14.15□□□□□ -0.14
LMNB1-202ENST00000395354 RBMY1DP0C7P1 496 aaKnown RBP14.15□□□□□ -0.14
LMNB1-202ENST00000395354 TRGV11A0A075B6L2 103 aa14.14□□□□□ -0.15
LMNB1-202ENST00000395354 M0R381 172 aa14.14□□□□□ -0.15
LMNB1-202ENST00000395354 ZNF124Q15973 351 aa14.14□□□□□ -0.15
LMNB1-202ENST00000395354 PRSS3P2Q8NHM4 247 aa14.14□□□□□ -0.15
LMNB1-202ENST00000395354 C9orf85Q96MD7 179 aa14.14□□□□□ -0.15
LMNB1-202ENST00000395354 FAM19A2Q8N3H0 131 aa14.13□□□□□ -0.15
LMNB1-202ENST00000395354 MRAP2Q96G30 205 aa14.13□□□□□ -0.15
LMNB1-202ENST00000395354 LINC00467Q9BRT7 94 aa14.13□□□□□ -0.15
LMNB1-202ENST00000395354 DPH3P1Q9H4G8 78 aa14.13□□□□□ -0.15
LMNB1-202ENST00000395354 FA2HQ7L5A8 372 aa14.13□□□□□ -0.15
LMNB1-202ENST00000395354 Q8N1Y9 231 aa14.13□□□□□ -0.15
LMNB1-202ENST00000395354 AP1S3Q96PC3 154 aa14.13□□□□□ -0.15
LMNB1-202ENST00000395354 NPYP01303 97 aa14.12□□□□□ -0.15
LMNB1-202ENST00000395354 KPRPQ5T749 579 aaPredicted RBP14.12□□□□□ -0.15
LMNB1-202ENST00000395354 GTSCR1Q86UQ5 136 aa14.12□□□□□ -0.15
LMNB1-202ENST00000395354 STHQ8IWL8 128 aa14.12□□□□□ -0.15
LMNB1-202ENST00000395354 AP5S1Q9NUS5 200 aa14.12□□□□□ -0.15
LMNB1-202ENST00000395354 SMKR1H3BMG3 65 aa14.11□□□□□ -0.15
LMNB1-202ENST00000395354 FXYD7P58549 80 aa14.11□□□□□ -0.15
LMNB1-202ENST00000395354 TRPT1Q86TN4 253 aaKnown RBP14.11□□□□□ -0.15
LMNB1-202ENST00000395354 DEFB125Q8N687 156 aa14.11□□□□□ -0.15
LMNB1-202ENST00000395354 SYT8Q8NBV8 401 aa14.11□□□□□ -0.15
LMNB1-202ENST00000395354 MAP1LC3AQ9H492 121 aa14.11□□□□□ -0.15
LMNB1-202ENST00000395354 IGHV1-24A0A0C4DH33 117 aa14.1□□□□□ -0.15
LMNB1-202ENST00000395354 PRSS47A8MTI9 375 aa14.1□□□□□ -0.15
LMNB1-202ENST00000395354 TNFRSF6BO95407 300 aa14.1□□□□□ -0.15
LMNB1-202ENST00000395354 NCR2O95944 276 aa14.1□□□□□ -0.15
LMNB1-202ENST00000395354 POM121L12Q8N7R1 296 aa14.1□□□□□ -0.15
LMNB1-202ENST00000395354 GSN-AS1Q9NRJ2 163 aa14.1□□□□□ -0.15
LMNB1-202ENST00000395354 SCGB1D1O95968 90 aa14.09□□□□□ -0.15
LMNB1-202ENST00000395354 INSP01308 110 aa14.09□□□□□ -0.15
LMNB1-202ENST00000395354 RBMY1A1P0DJD3 496 aaKnown RBP14.09□□□□□ -0.15
LMNB1-202ENST00000395354 RBMY1CP0DJD4 496 aa14.09□□□□□ -0.15
LMNB1-202ENST00000395354 IFI27P40305 119 aaPredicted RBP14.09□□□□□ -0.15
LMNB1-202ENST00000395354 S100A12P80511 92 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms