RNA–Protein interactions for RNA: ENST00000395060.5

CLIP2-203, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP2, Length 3,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-203ENST00000395060 CRYBG3Q68DQ2 2970 aa10.91□□□□□ -0.66
CLIP2-203ENST00000395060 RPL39P62891 51 aaKnown RBP10.91□□□□□ -0.66
CLIP2-203ENST00000395060 FOXI1Q12951 378 aa10.91□□□□□ -0.66
CLIP2-203ENST00000395060 OR11H6Q8NGC7 330 aa10.91□□□□□ -0.66
CLIP2-203ENST00000395060 RAX2Q96IS3 184 aa10.91□□□□□ -0.66
CLIP2-203ENST00000395060 C20orf173Q96LM9 149 aa10.91□□□□□ -0.66
CLIP2-203ENST00000395060 PSMG3-AS1Q96PY0 264 aa10.91□□□□□ -0.66
CLIP2-203ENST00000395060 COX8CQ7Z4L0 72 aa10.91□□□□□ -0.66
CLIP2-203ENST00000395060 BAALCQ8WXS3 180 aa10.91□□□□□ -0.66
CLIP2-203ENST00000395060 GEMIN7Q9H840 131 aaKnown RBP10.91□□□□□ -0.66
CLIP2-203ENST00000395060 IGHV3-11P01762 117 aa10.9□□□□□ -0.66
CLIP2-203ENST00000395060 TMEM170BQ5T4T1 132 aa10.9□□□□□ -0.66
CLIP2-203ENST00000395060 Q8N9W7 124 aa10.9□□□□□ -0.66
CLIP2-203ENST00000395060 TIMD4Q96H15 378 aa10.9□□□□□ -0.66
CLIP2-203ENST00000395060 METTL26Q96S19 204 aa10.9□□□□□ -0.66
CLIP2-203ENST00000395060 SPATA25Q9BR10 227 aa10.9□□□□□ -0.66
CLIP2-203ENST00000395060 NOTCH3Q9UM47 2321 aa10.9□□□□□ -0.66
CLIP2-203ENST00000395060 A0A087WWL8 130 aa10.9□□□□□ -0.66
CLIP2-203ENST00000395060 F5H697 171 aa10.9□□□□□ -0.66
CLIP2-203ENST00000395060 TSPAN13O95857 204 aa10.9□□□□□ -0.66
CLIP2-203ENST00000395060 Q6ZS46 218 aa10.9□□□□□ -0.66
CLIP2-203ENST00000395060 PRTN3P24158 256 aa10.89□□□□□ -0.67
CLIP2-203ENST00000395060 ANXA2RQ3ZCQ2 193 aa10.89□□□□□ -0.67
CLIP2-203ENST00000395060 TRBV12-3P01733 135 aa10.89□□□□□ -0.67
CLIP2-203ENST00000395060 CRYBA4P53673 196 aa10.89□□□□□ -0.67
CLIP2-203ENST00000395060 CSPG4Q6UVK1 2322 aa10.89□□□□□ -0.67
CLIP2-203ENST00000395060 CSMD2Q7Z408 3487 aa10.89□□□□□ -0.67
CLIP2-203ENST00000395060 FAM74A4Q5TZK3 123 aa10.89□□□□□ -0.67
CLIP2-203ENST00000395060 DLX4Q92988 240 aaPredicted RBP10.89□□□□□ -0.67
CLIP2-203ENST00000395060 GATA3P23771 443 aa10.88□□□□□ -0.67
CLIP2-203ENST00000395060 XGP55808 180 aa10.88□□□□□ -0.67
CLIP2-203ENST00000395060 LY6G5BQ8NDX9 201 aa10.88□□□□□ -0.67
CLIP2-203ENST00000395060 ZFYVE26Q68DK2 2539 aa10.88□□□□□ -0.67
CLIP2-203ENST00000395060 LINC01546A6NGU7 62 aa10.88□□□□□ -0.67
CLIP2-203ENST00000395060 C11orf86A6NJI1 115 aa10.88□□□□□ -0.67
CLIP2-203ENST00000395060 IGKV3-20P01619 116 aa10.88□□□□□ -0.67
CLIP2-203ENST00000395060 NEXN-AS1Q8NBZ9 246 aa10.88□□□□□ -0.67
CLIP2-203ENST00000395060 OPRPNQ99935 248 aaPredicted RBP10.88□□□□□ -0.67
CLIP2-203ENST00000395060 LY6DQ14210 128 aa10.87□□□□□ -0.67
CLIP2-203ENST00000395060 SLC50A1Q9BRV3 221 aa10.87□□□□□ -0.67
CLIP2-203ENST00000395060 BEX4Q9NWD9 120 aaPredicted RBP10.87□□□□□ -0.67
CLIP2-203ENST00000395060 ODF3BA8MYP8 253 aa10.87□□□□□ -0.67
CLIP2-203ENST00000395060 UNQ9165/PRO28630Q6UXU0 137 aa10.87□□□□□ -0.67
CLIP2-203ENST00000395060 C1QTNF4Q9BXJ3 329 aa10.87□□□□□ -0.67
CLIP2-203ENST00000395060 TP53TG1Q9Y2A0 90 aa10.87□□□□□ -0.67
CLIP2-203ENST00000395060 CFAP126Q5VTH2 177 aa10.87□□□□□ -0.67
CLIP2-203ENST00000395060 CDIP1Q9H305 208 aa10.87□□□□□ -0.67
CLIP2-203ENST00000395060 PIEZO1Q92508 2521 aa10.86□□□□□ -0.67
CLIP2-203ENST00000395060 TCL1BO95988 128 aa10.86□□□□□ -0.67
CLIP2-203ENST00000395060 TAL2Q16559 108 aa10.86□□□□□ -0.67
CLIP2-203ENST00000395060 ORMDL2Q53FV1 153 aa10.86□□□□□ -0.67
CLIP2-203ENST00000395060 UBTD1Q9HAC8 227 aa10.86□□□□□ -0.67
CLIP2-203ENST00000395060 ZNF256Q9Y2P7 627 aaPredicted RBP10.86□□□□□ -0.67
CLIP2-203ENST00000395060 ITPR1Q14643 2758 aa10.86□□□□□ -0.67
CLIP2-203ENST00000395060 TOMM6Q96B49 74 aa10.86□□□□□ -0.67
CLIP2-203ENST00000395060 SAA4P35542 130 aa10.85□□□□□ -0.67
CLIP2-203ENST00000395060 ADORA2A-AS1P86434 159 aa10.85□□□□□ -0.67
CLIP2-203ENST00000395060 ZNF48Q96MX3 618 aaPredicted RBP10.85□□□□□ -0.67
CLIP2-203ENST00000395060 TSPEAR-AS2P59090 65 aa10.85□□□□□ -0.67
CLIP2-203ENST00000395060 CENPEQ02224 2701 aa10.84□□□□□ -0.67
CLIP2-203ENST00000395060 ASIPP42127 132 aa10.84□□□□□ -0.67
CLIP2-203ENST00000395060 C1orf122Q6ZSJ8 110 aa10.84□□□□□ -0.67
CLIP2-203ENST00000395060 TRPT1Q86TN4 253 aaKnown RBP10.84□□□□□ -0.67
CLIP2-203ENST00000395060 CARD19Q96LW7 228 aa10.84□□□□□ -0.67
CLIP2-203ENST00000395060 PSMG4Q5JS54 123 aa10.84□□□□□ -0.67
CLIP2-203ENST00000395060 MRAP2Q96G30 205 aa10.84□□□□□ -0.67
CLIP2-203ENST00000395060 DPH3P1Q9H4G8 78 aa10.84□□□□□ -0.67
CLIP2-203ENST00000395060 ADARB2-AS1A8MUL3 147 aa10.83□□□□□ -0.68
CLIP2-203ENST00000395060 SCGB1A1P11684 91 aa10.83□□□□□ -0.68
CLIP2-203ENST00000395060 EDN2P20800 178 aa10.83□□□□□ -0.68
CLIP2-203ENST00000395060 CRIP2P52943 208 aaPredicted RBP10.83□□□□□ -0.68
CLIP2-203ENST00000395060 FAM110DQ8TAY7 271 aaPredicted RBP10.83□□□□□ -0.68
CLIP2-203ENST00000395060 A6NJY4 79 aa10.83□□□□□ -0.68
CLIP2-203ENST00000395060 SRSF2Q01130 221 aaKnown RBP10.83□□□□□ -0.68
CLIP2-203ENST00000395060 OR10J6PQ8NGY7 276 aa10.83□□□□□ -0.68
CLIP2-203ENST00000395060 EEF1AKMT3Q96AZ1 226 aa10.83□□□□□ -0.68
CLIP2-203ENST00000395060 RNF183Q96D59 192 aa10.83□□□□□ -0.68
CLIP2-203ENST00000395060 CACNA1AO00555 2505 aa10.82□□□□□ -0.68
CLIP2-203ENST00000395060 CRYGDP07320 174 aa10.82□□□□□ -0.68
CLIP2-203ENST00000395060 LY6EQ16553 131 aa10.82□□□□□ -0.68
CLIP2-203ENST00000395060 Q6ZUT4 128 aa10.82□□□□□ -0.68
CLIP2-203ENST00000395060 Q8N6K4 173 aa10.82□□□□□ -0.68
CLIP2-203ENST00000395060 MUC4Q99102 2169 aa10.82□□□□□ -0.68
CLIP2-203ENST00000395060 KLRB1Q12918 225 aa10.82□□□□□ -0.68
CLIP2-203ENST00000395060 BRD3OSQ6XYD6 125 aa10.82□□□□□ -0.68
CLIP2-203ENST00000395060 TRAV2A0A0B4J234 112 aa10.82□□□□□ -0.68
CLIP2-203ENST00000395060 TRAV12-1A0A0B4J245 112 aa10.82□□□□□ -0.68
CLIP2-203ENST00000395060 RBAKDNA6NC62 111 aa10.82□□□□□ -0.68
CLIP2-203ENST00000395060 Q1RN00 199 aa10.82□□□□□ -0.68
CLIP2-203ENST00000395060 ZFAND2AQ8N6M9 145 aa10.82□□□□□ -0.68
CLIP2-203ENST00000395060 LINC00477Q96M19 166 aa10.82□□□□□ -0.68
CLIP2-203ENST00000395060 PKD1L2Q7Z442 2459 aa10.81□□□□□ -0.68
CLIP2-203ENST00000395060 M0R1W7 72 aa10.81□□□□□ -0.68
CLIP2-203ENST00000395060 TSHBP01222 138 aa10.81□□□□□ -0.68
CLIP2-203ENST00000395060 C9orf47Q6ZRZ4 202 aa10.81□□□□□ -0.68
CLIP2-203ENST00000395060 NDUFA11Q86Y39 141 aa10.81□□□□□ -0.68
CLIP2-203ENST00000395060 ANKRD29Q8N6D5 301 aa10.81□□□□□ -0.68
CLIP2-203ENST00000395060 C2CD3Q4AC94 2353 aa10.81□□□□□ -0.68
CLIP2-203ENST00000395060 NPC2P61916 151 aa10.81□□□□□ -0.68
CLIP2-203ENST00000395060 CFAP161Q6P656 301 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms