RNA–Protein interactions for RNA: ENST00000394849.1

UPK3B-203, Transcript of uroplakin 3B, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene UPK3B, Length 1,041 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3B-203ENST00000394849 BOLA1Q9Y3E2 137 aa13.27□□□□□ -0.29
UPK3B-203ENST00000394849 A0A1B0GV50 99 aa13.26□□□□□ -0.29
UPK3B-203ENST00000394849 F6UZH7 168 aa13.26□□□□□ -0.29
UPK3B-203ENST00000394849 ORM1P02763 201 aa13.26□□□□□ -0.29
UPK3B-203ENST00000394849 ZFP69Q49AA0 526 aa13.26□□□□□ -0.29
UPK3B-203ENST00000394849 MUC21Q5SSG8 566 aa13.26□□□□□ -0.29
UPK3B-203ENST00000394849 Q6AWC8 147 aa13.26□□□□□ -0.29
UPK3B-203ENST00000394849 Q6ZQT7 251 aa13.26□□□□□ -0.29
UPK3B-203ENST00000394849 MBD3L1Q8WWY6 194 aa13.26□□□□□ -0.29
UPK3B-203ENST00000394849 PSG8Q9UQ74 426 aa13.26□□□□□ -0.29
UPK3B-203ENST00000394849 TRGV4A0A0C4DH28 118 aa13.25□□□□□ -0.29
UPK3B-203ENST00000394849 A0A1B0GVG6 124 aa13.25□□□□□ -0.29
UPK3B-203ENST00000394849 FBLL1A6NHQ2 334 aaKnown RBP13.25□□□□□ -0.29
UPK3B-203ENST00000394849 K7EQD1 137 aa13.25□□□□□ -0.29
UPK3B-203ENST00000394849 H2AFB1P0C5Y9 115 aa13.25□□□□□ -0.29
UPK3B-203ENST00000394849 PPT1P50897 306 aa13.25□□□□□ -0.29
UPK3B-203ENST00000394849 FLI1Q01543 452 aaPredicted RBP13.25□□□□□ -0.29
UPK3B-203ENST00000394849 CST9LP1Q5W188 147 aa13.25□□□□□ -0.29
UPK3B-203ENST00000394849 PRNTQ86SH4 94 aa13.25□□□□□ -0.29
UPK3B-203ENST00000394849 SLC51BQ86UW2 128 aa13.25□□□□□ -0.29
UPK3B-203ENST00000394849 TMEM75Q8N9X5 138 aa13.25□□□□□ -0.29
UPK3B-203ENST00000394849 TXNDC17Q9BRA2 123 aa13.25□□□□□ -0.29
UPK3B-203ENST00000394849 NAGKQ9UJ70 344 aa13.25□□□□□ -0.29
UPK3B-203ENST00000394849 TRAV21A0A0B4J279 112 aa13.24□□□□□ -0.29
UPK3B-203ENST00000394849 LRCOL1A6NCL2 159 aa13.24□□□□□ -0.29
UPK3B-203ENST00000394849 PEX7O00628 323 aa13.24□□□□□ -0.29
UPK3B-203ENST00000394849 ZNF415Q09FC8 603 aa13.24□□□□□ -0.29
UPK3B-203ENST00000394849 FAM159AQ6UWV7 190 aa13.24□□□□□ -0.29
UPK3B-203ENST00000394849 TVP23CQ96ET8 276 aa13.24□□□□□ -0.29
UPK3B-203ENST00000394849 MRPL16Q9NX20 251 aaKnown RBP13.24□□□□□ -0.29
UPK3B-203ENST00000394849 RAB5CP51148 216 aa13.23□□□□□ -0.29
UPK3B-203ENST00000394849 SH2D6Q7Z4S9 175 aa13.23□□□□□ -0.29
UPK3B-203ENST00000394849 Q8N814 137 aa13.23□□□□□ -0.29
UPK3B-203ENST00000394849 HIST1H2BAQ96A08 127 aa13.23□□□□□ -0.29
UPK3B-203ENST00000394849 TP53TG3Q9ULZ0 132 aa13.23□□□□□ -0.29
UPK3B-203ENST00000394849 ARL2-SNX15V9GYD0 113 aa13.23□□□□□ -0.29
UPK3B-203ENST00000394849 TRAV34A0A0B4J273 112 aa13.22□□□□□ -0.29
UPK3B-203ENST00000394849 PAGE4O60829 102 aa13.22□□□□□ -0.29
UPK3B-203ENST00000394849 C9orf62Q8N4C0 152 aa13.22□□□□□ -0.29
UPK3B-203ENST00000394849 TRGV11A0A075B6L2 103 aa13.21□□□□□ -0.29
UPK3B-203ENST00000394849 C9JCJ5 164 aa13.21□□□□□ -0.29
UPK3B-203ENST00000394849 IGLV2-11P01706 119 aa13.21□□□□□ -0.29
UPK3B-203ENST00000394849 GYPEP15421 78 aa13.21□□□□□ -0.29
UPK3B-203ENST00000394849 SMUG1Q53HV7 270 aa13.21□□□□□ -0.29
UPK3B-203ENST00000394849 SAPCD1Q5SSQ6 148 aa13.21□□□□□ -0.29
UPK3B-203ENST00000394849 LINC00479Q96M42 142 aa13.21□□□□□ -0.29
UPK3B-203ENST00000394849 TEX46H3BTG2 121 aa13.2□□□□□ -0.3
UPK3B-203ENST00000394849 SULT1A2P50226 295 aa13.2□□□□□ -0.3
UPK3B-203ENST00000394849 TMEM183BQ1AE95 376 aa13.2□□□□□ -0.3
UPK3B-203ENST00000394849 TMEM183AQ8IXX5 376 aa13.2□□□□□ -0.3
UPK3B-203ENST00000394849 TCEAL7Q9BRU2 100 aa13.2□□□□□ -0.3
UPK3B-203ENST00000394849 FAM30AQ9NZY2 134 aa13.2□□□□□ -0.3
UPK3B-203ENST00000394849 IGHV3-38A0A0C4DH36 116 aa13.19□□□□□ -0.3
UPK3B-203ENST00000394849 GCGP01275 180 aa13.19□□□□□ -0.3
UPK3B-203ENST00000394849 TIRAPP58753 221 aa13.19□□□□□ -0.3
UPK3B-203ENST00000394849 UBE2G1P62253 170 aa13.19□□□□□ -0.3
UPK3B-203ENST00000394849 IBA57-AS1B1ANH7 110 aa13.18□□□□□ -0.3
UPK3B-203ENST00000394849 AKR1C3P42330 323 aa13.18□□□□□ -0.3
UPK3B-203ENST00000394849 LINC01556Q5JQF7 62 aa13.18□□□□□ -0.3
UPK3B-203ENST00000394849 Q86TA4 180 aa13.18□□□□□ -0.3
UPK3B-203ENST00000394849 LINC00528Q8N1L1 170 aa13.18□□□□□ -0.3
UPK3B-203ENST00000394849 RASL10AQ92737 203 aa13.18□□□□□ -0.3
UPK3B-203ENST00000394849 KCNS1Q96KK3 526 aa13.18□□□□□ -0.3
UPK3B-203ENST00000394849 SDF2L1Q9HCN8 221 aa13.18□□□□□ -0.3
UPK3B-203ENST00000394849 TDRG1Q3Y452 100 aa13.17□□□□□ -0.3
UPK3B-203ENST00000394849 Q6ZSA8 131 aa13.17□□□□□ -0.3
UPK3B-203ENST00000394849 FMC1Q96HJ9 113 aa13.17□□□□□ -0.3
UPK3B-203ENST00000394849 SPXQ9BT56 116 aa13.17□□□□□ -0.3
UPK3B-203ENST00000394849 GNG13Q9P2W3 67 aa13.17□□□□□ -0.3
UPK3B-203ENST00000394849 PFN1P07737 140 aaKnown RBP13.16□□□□□ -0.3
UPK3B-203ENST00000394849 ZNF80P51504 273 aaPredicted RBP13.16□□□□□ -0.3
UPK3B-203ENST00000394849 ZNF479Q96JC4 524 aa13.16□□□□□ -0.3
UPK3B-203ENST00000394849 MANBALQ9NQG1 85 aa13.16□□□□□ -0.3
UPK3B-203ENST00000394849 TRAV1-1A0A0B4J248 108 aa13.15□□□□□ -0.3
UPK3B-203ENST00000394849 GNRH2O43555 120 aa13.15□□□□□ -0.3
UPK3B-203ENST00000394849 TYMSP04818 313 aa13.15□□□□□ -0.3
UPK3B-203ENST00000394849 SFTA3P0C7M3 94 aa13.15□□□□□ -0.3
UPK3B-203ENST00000394849 NKX2-5P52952 324 aaPredicted RBP13.15□□□□□ -0.3
UPK3B-203ENST00000394849 ZFP30Q9Y2G7 519 aa13.15□□□□□ -0.3
UPK3B-203ENST00000394849 TRAV8-6A0A0B4J262 113 aa13.14□□□□□ -0.31
UPK3B-203ENST00000394849 OXTP01178 125 aa13.14□□□□□ -0.31
UPK3B-203ENST00000394849 CCL20P78556 96 aa13.14□□□□□ -0.31
UPK3B-203ENST00000394849 TM2D2Q9BX73 214 aa13.14□□□□□ -0.31
UPK3B-203ENST00000394849 TRAV4A0A0B4J268 109 aa13.13□□□□□ -0.31
UPK3B-203ENST00000394849 IGHV3-16A0A0C4DH30 117 aa13.13□□□□□ -0.31
UPK3B-203ENST00000394849 SCO2A0A1W2PP80 73 aa13.13□□□□□ -0.31
UPK3B-203ENST00000394849 UBR4Q5T4S7 5183 aa13.13□□□□□ -0.31
UPK3B-203ENST00000394849 HMCN2Q8NDA2 5059 aa13.13□□□□□ -0.31
UPK3B-203ENST00000394849 TRBV6-1A0A0K0K1D8 114 aa13.12□□□□□ -0.31
UPK3B-203ENST00000394849 FABP5P3A8MUU1 101 aa13.12□□□□□ -0.31
UPK3B-203ENST00000394849 IFNA1P01562 189 aa13.12□□□□□ -0.31
UPK3B-203ENST00000394849 S100A9P06702 114 aaKnown RBP13.12□□□□□ -0.31
UPK3B-203ENST00000394849 ALKAL2Q6UX46 152 aa13.12□□□□□ -0.31
UPK3B-203ENST00000394849 C11orf21Q9P2W6 132 aa13.12□□□□□ -0.31
UPK3B-203ENST00000394849 PLA2G2DQ9UNK4 145 aa13.12□□□□□ -0.31
UPK3B-203ENST00000394849 LAGE3Q14657 143 aa13.11□□□□□ -0.31
UPK3B-203ENST00000394849 NHLRC2Q8NBF2 726 aa13.11□□□□□ -0.31
UPK3B-203ENST00000394849 OR4C5Q8NGB2 326 aa13.11□□□□□ -0.31
UPK3B-203ENST00000394849 Q9HAA7 133 aa13.11□□□□□ -0.31
UPK3B-203ENST00000394849 M0R2P5 195 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms