RNA–Protein interactions for RNA: ENST00000393773.7

CHMP3-202, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-202ENST00000393773 PQLC2Q6ZP29 291 aa10.04□□□□□ -0.8
CHMP3-202ENST00000393773 CCDC32Q9BV29 185 aa10.04□□□□□ -0.8
CHMP3-202ENST00000393773 Q9UF83 564 aa10.04□□□□□ -0.8
CHMP3-202ENST00000393773 COX11Q9Y6N1 276 aa10.04□□□□□ -0.8
CHMP3-202ENST00000393773 RNF222A6NCQ9 220 aa10.03□□□□□ -0.8
CHMP3-202ENST00000393773 RBFOX3A6NFN3 312 aa10.03□□□□□ -0.8
CHMP3-202ENST00000393773 GGTLC3B5MD39 225 aa10.03□□□□□ -0.8
CHMP3-202ENST00000393773 GCGP01275 180 aa10.03□□□□□ -0.8
CHMP3-202ENST00000393773 IGLV2-8P01709 118 aa10.03□□□□□ -0.8
CHMP3-202ENST00000393773 LINC00479Q96M42 142 aa10.03□□□□□ -0.8
CHMP3-202ENST00000393773 NDFIP1Q9BT67 221 aa10.03□□□□□ -0.8
CHMP3-202ENST00000393773 TAAR5O14804 337 aa10.02□□□□□ -0.81
CHMP3-202ENST00000393773 IGLV2-11P01706 119 aa10.02□□□□□ -0.81
CHMP3-202ENST00000393773 H2BFSP57053 126 aa10.02□□□□□ -0.81
CHMP3-202ENST00000393773 RAB2AP61019 212 aa10.02□□□□□ -0.81
CHMP3-202ENST00000393773 UFSP1Q6NVU6 142 aa10.02□□□□□ -0.81
CHMP3-202ENST00000393773 ZFP2Q6ZN57 461 aa10.02□□□□□ -0.81
CHMP3-202ENST00000393773 CYB561D1Q8N8Q1 229 aa10.02□□□□□ -0.81
CHMP3-202ENST00000393773 Q8N976 141 aa10.02□□□□□ -0.81
CHMP3-202ENST00000393773 SMIM3Q9BZL3 60 aa10.02□□□□□ -0.81
CHMP3-202ENST00000393773 SH3BGRL3Q9H299 93 aa10.02□□□□□ -0.81
CHMP3-202ENST00000393773 A0A087WWC5 75 aa10.01□□□□□ -0.81
CHMP3-202ENST00000393773 SERTM2A0A1B0GWG4 89 aa10.01□□□□□ -0.81
CHMP3-202ENST00000393773 TCRAP04437 139 aa10.01□□□□□ -0.81
CHMP3-202ENST00000393773 PPP1R1CQ8WVI7 109 aa10.01□□□□□ -0.81
CHMP3-202ENST00000393773 RMI2Q96E14 147 aa10.01□□□□□ -0.81
CHMP3-202ENST00000393773 IGKV2D-24A0A075B6R9 120 aa10□□□□□ -0.81
CHMP3-202ENST00000393773 HMGB3O15347 200 aaKnown RBP10□□□□□ -0.81
CHMP3-202ENST00000393773 ARL14EPLP0DKL9 152 aa10□□□□□ -0.81
CHMP3-202ENST00000393773 HNRNPA3P51991 378 aaKnown RBP10□□□□□ -0.81
CHMP3-202ENST00000393773 ACOT6Q3I5F7 207 aaPredicted RBP10□□□□□ -0.81
CHMP3-202ENST00000393773 PIK3CD-AS1Q5SR53 167 aa10□□□□□ -0.81
CHMP3-202ENST00000393773 ATRAIDQ6UW56 229 aa10□□□□□ -0.81
CHMP3-202ENST00000393773 NIT1Q86X76 327 aa10□□□□□ -0.81
CHMP3-202ENST00000393773 C14orf178Q8N769 122 aaPredicted RBP10□□□□□ -0.81
CHMP3-202ENST00000393773 C5orf17Q8NAS9 161 aa10□□□□□ -0.81
CHMP3-202ENST00000393773 SCGB1C1Q8TD33 95 aa10□□□□□ -0.81
CHMP3-202ENST00000393773 SAMD10Q9BYL1 202 aa10□□□□□ -0.81
CHMP3-202ENST00000393773 WFDC1Q9HC57 220 aa10□□□□□ -0.81
CHMP3-202ENST00000393773 PSG8Q9UQ74 426 aa10□□□□□ -0.81
CHMP3-202ENST00000393773 RNF213Q63HN8 5207 aa10□□□□□ -0.81
CHMP3-202ENST00000393773 TNXBP22105 4242 aa9.99□□□□□ -0.81
CHMP3-202ENST00000393773 A0A1W2PPV4 95 aa9.99□□□□□ -0.81
CHMP3-202ENST00000393773 A8MWV9 139 aa9.99□□□□□ -0.81
CHMP3-202ENST00000393773 CYCSP99999 105 aaKnown RBP9.99□□□□□ -0.81
CHMP3-202ENST00000393773 MZT2BQ6NZ67 158 aa9.99□□□□□ -0.81
CHMP3-202ENST00000393773 IGKV3D-20A0A0C4DH25 116 aa9.98□□□□□ -0.81
CHMP3-202ENST00000393773 MPC2O95563 127 aa9.98□□□□□ -0.81
CHMP3-202ENST00000393773 FLI1Q01543 452 aaPredicted RBP9.98□□□□□ -0.81
CHMP3-202ENST00000393773 ZFP69Q49AA0 526 aa9.98□□□□□ -0.81
CHMP3-202ENST00000393773 SMUG1Q53HV7 270 aa9.98□□□□□ -0.81
CHMP3-202ENST00000393773 OR2T35Q8NGX2 323 aa9.98□□□□□ -0.81
CHMP3-202ENST00000393773 SUN5Q8TC36 379 aa9.98□□□□□ -0.81
CHMP3-202ENST00000393773 JPT2Q9H910 190 aa9.98□□□□□ -0.81
CHMP3-202ENST00000393773 KLK12Q9UKR0 248 aa9.98□□□□□ -0.81
CHMP3-202ENST00000393773 STAG3L2P0CL84 134 aa9.97□□□□□ -0.81
CHMP3-202ENST00000393773 STAG3L3P0CL85 134 aa9.97□□□□□ -0.81
CHMP3-202ENST00000393773 RPL12P30050 165 aaKnown RBP9.97□□□□□ -0.81
CHMP3-202ENST00000393773 OR10G9Q8NGN4 311 aa9.97□□□□□ -0.81
CHMP3-202ENST00000393773 OR10G7Q8NGN6 311 aa9.97□□□□□ -0.81
CHMP3-202ENST00000393773 URGCP-MRPS24S4R325 110 aa9.97□□□□□ -0.81
CHMP3-202ENST00000393773 LRP2P98164 4655 aa9.97□□□□□ -0.81
CHMP3-202ENST00000393773 K7EQM0 130 aa9.96□□□□□ -0.82
CHMP3-202ENST00000393773 SEC11BP0C7V7 166 aa9.96□□□□□ -0.82
CHMP3-202ENST00000393773 PET100P0DJ07 73 aa9.96□□□□□ -0.82
CHMP3-202ENST00000393773 CDC34P49427 236 aaPredicted RBP9.96□□□□□ -0.82
CHMP3-202ENST00000393773 FGF8P55075 233 aaPredicted RBP9.96□□□□□ -0.82
CHMP3-202ENST00000393773 RPL37AP61513 92 aaKnown RBP9.96□□□□□ -0.82
CHMP3-202ENST00000393773 LGALSLQ3ZCW2 172 aaPredicted RBP9.96□□□□□ -0.82
CHMP3-202ENST00000393773 PRNTQ86SH4 94 aa9.96□□□□□ -0.82
CHMP3-202ENST00000393773 ENKURQ8TC29 256 aa9.96□□□□□ -0.82
CHMP3-202ENST00000393773 DAZAP1Q96EP5 407 aaKnown RBP9.96□□□□□ -0.82
CHMP3-202ENST00000393773 CHCHD7Q9BUK0 85 aa9.96□□□□□ -0.82
CHMP3-202ENST00000393773 GCHFRP30047 84 aa9.95□□□□□ -0.82
CHMP3-202ENST00000393773 UBE2WQ96B02 151 aa9.95□□□□□ -0.82
CHMP3-202ENST00000393773 IL36BQ9NZH7 164 aa9.95□□□□□ -0.82
CHMP3-202ENST00000393773 RHODO00212 210 aa9.94□□□□□ -0.82
CHMP3-202ENST00000393773 MT1HL1P0DM35 61 aa9.94□□□□□ -0.82
CHMP3-202ENST00000393773 S100A4P26447 101 aaKnown RBP9.94□□□□□ -0.82
CHMP3-202ENST00000393773 ASIPP42127 132 aa9.94□□□□□ -0.82
CHMP3-202ENST00000393773 OR2G3Q8NGZ4 309 aa9.94□□□□□ -0.82
CHMP3-202ENST00000393773 H3BVH4 76 aa9.93□□□□□ -0.82
CHMP3-202ENST00000393773 C14orf177Q52M58 125 aa9.93□□□□□ -0.82
CHMP3-202ENST00000393773 RAB24Q969Q5 203 aa9.93□□□□□ -0.82
CHMP3-202ENST00000393773 EPDR1Q9UM22 224 aa9.93□□□□□ -0.82
CHMP3-202ENST00000393773 A0A087WX48 190 aa9.92□□□□□ -0.82
CHMP3-202ENST00000393773 SAPCD1Q5SSQ6 148 aa9.92□□□□□ -0.82
CHMP3-202ENST00000393773 FAM74A4Q5TZK3 123 aa9.92□□□□□ -0.82
CHMP3-202ENST00000393773 DMRTA1Q5VZB9 504 aa9.92□□□□□ -0.82
CHMP3-202ENST00000393773 ARL2-SNX15V9GYD0 113 aa9.92□□□□□ -0.82
CHMP3-202ENST00000393773 INMT-MINDY4F8WBC2 141 aa9.91□□□□□ -0.82
CHMP3-202ENST00000393773 SUMO1P63165 101 aaKnown RBP9.91□□□□□ -0.82
CHMP3-202ENST00000393773 ELOBQ15370 118 aa9.91□□□□□ -0.82
CHMP3-202ENST00000393773 DNLZQ5SXM8 178 aa9.91□□□□□ -0.82
CHMP3-202ENST00000393773 ENHOQ6UWT2 76 aa9.91□□□□□ -0.82
CHMP3-202ENST00000393773 Q86TA4 180 aa9.91□□□□□ -0.82
CHMP3-202ENST00000393773 C1orf43Q9BWL3 253 aa9.91□□□□□ -0.82
CHMP3-202ENST00000393773 A0A087WWL8 130 aa9.9□□□□□ -0.82
CHMP3-202ENST00000393773 B4DEV8 164 aa9.9□□□□□ -0.82
CHMP3-202ENST00000393773 UBE2D3P61077 147 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms