RNA–Protein interactions for RNA: ENST00000393693.6

SNCB-202, Transcript of synuclein beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCB, Length 1,234 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCB-202ENST00000393693 PKD1P98161 4303 aa13.3□□□□□ -0.28
SNCB-202ENST00000393693 ABCA13Q86UQ4 5058 aa13.3□□□□□ -0.28
SNCB-202ENST00000393693 PRSS29PA6NIE9 313 aa13.3□□□□□ -0.28
SNCB-202ENST00000393693 HLA-DRB4P13762 266 aa13.3□□□□□ -0.28
SNCB-202ENST00000393693 ZNF80P51504 273 aaPredicted RBP13.3□□□□□ -0.28
SNCB-202ENST00000393693 COX19Q49B96 90 aa13.3□□□□□ -0.28
SNCB-202ENST00000393693 HLA-DRB4X5D2U9 266 aa13.3□□□□□ -0.28
SNCB-202ENST00000393693 ORM1P02763 201 aa13.29□□□□□ -0.28
SNCB-202ENST00000393693 RPS10P46783 165 aaKnown RBP13.29□□□□□ -0.28
SNCB-202ENST00000393693 TCL1AP56279 114 aa13.29□□□□□ -0.28
SNCB-202ENST00000393693 GDF5OSQ5U4N7 250 aa13.29□□□□□ -0.28
SNCB-202ENST00000393693 Q6AWC8 147 aa13.29□□□□□ -0.28
SNCB-202ENST00000393693 ZFAND2AQ8N6M9 145 aa13.29□□□□□ -0.28
SNCB-202ENST00000393693 TYMSP04818 313 aa13.28□□□□□ -0.28
SNCB-202ENST00000393693 P0DMU3 169 aa13.28□□□□□ -0.28
SNCB-202ENST00000393693 FAM231AP0DMU4 169 aa13.28□□□□□ -0.28
SNCB-202ENST00000393693 FAM231CP0DMU5 169 aa13.28□□□□□ -0.28
SNCB-202ENST00000393693 MED14OSP0DP75 135 aa13.28□□□□□ -0.28
SNCB-202ENST00000393693 LINC01559Q495D7 138 aa13.28□□□□□ -0.28
SNCB-202ENST00000393693 CLUHP3Q96NS8 147 aa13.28□□□□□ -0.28
SNCB-202ENST00000393693 NEU1Q99519 415 aa13.28□□□□□ -0.28
SNCB-202ENST00000393693 NDUFAF3Q9BU61 184 aa13.28□□□□□ -0.28
SNCB-202ENST00000393693 A8MTW9 85 aa13.27□□□□□ -0.29
SNCB-202ENST00000393693 KLLNB2CW77 178 aa13.27□□□□□ -0.29
SNCB-202ENST00000393693 H3BMM0 161 aa13.27□□□□□ -0.29
SNCB-202ENST00000393693 RNASE4P34096 147 aaKnown RBP13.27□□□□□ -0.29
SNCB-202ENST00000393693 BORCS7Q96B45 105 aa13.27□□□□□ -0.29
SNCB-202ENST00000393693 HIGD1CA8MV81 97 aa13.26□□□□□ -0.29
SNCB-202ENST00000393693 J3KRW8 73 aa13.26□□□□□ -0.29
SNCB-202ENST00000393693 IGKV3-20P01619 116 aa13.26□□□□□ -0.29
SNCB-202ENST00000393693 CDKN1BP46527 198 aa13.26□□□□□ -0.29
SNCB-202ENST00000393693 EMP1P54849 157 aa13.26□□□□□ -0.29
SNCB-202ENST00000393693 FOXA3P55318 350 aaPredicted RBP13.26□□□□□ -0.29
SNCB-202ENST00000393693 FXYD7P58549 80 aa13.26□□□□□ -0.29
SNCB-202ENST00000393693 NUP35Q8NFH5 326 aa13.26□□□□□ -0.29
SNCB-202ENST00000393693 C1QTNF4Q9BXJ3 329 aa13.26□□□□□ -0.29
SNCB-202ENST00000393693 C1orf196B1AJZ1 125 aa13.25□□□□□ -0.29
SNCB-202ENST00000393693 NUTF2P61970 127 aaKnown RBP13.25□□□□□ -0.29
SNCB-202ENST00000393693 WDR73Q6P4I2 378 aa13.25□□□□□ -0.29
SNCB-202ENST00000393693 RASL11AQ6T310 242 aa13.25□□□□□ -0.29
SNCB-202ENST00000393693 ATP5L2Q7Z4Y8 100 aa13.25□□□□□ -0.29
SNCB-202ENST00000393693 IGLV2-18A0A075B6J9 118 aa13.24□□□□□ -0.29
SNCB-202ENST00000393693 TMSB15BA0A087X1C1 80 aa13.24□□□□□ -0.29
SNCB-202ENST00000393693 C7orf71A4D174 169 aa13.24□□□□□ -0.29
SNCB-202ENST00000393693 PRR9Q5T870 116 aa13.24□□□□□ -0.29
SNCB-202ENST00000393693 ZNF705AQ6ZN79 300 aaPredicted RBP13.24□□□□□ -0.29
SNCB-202ENST00000393693 PGLYRP4Q96LB8 373 aa13.24□□□□□ -0.29
SNCB-202ENST00000393693 IGHV3OR16-12A0A075B7B8 117 aa13.23□□□□□ -0.29
SNCB-202ENST00000393693 GZMBP10144 247 aa13.23□□□□□ -0.29
SNCB-202ENST00000393693 RAB5BP61020 215 aa13.23□□□□□ -0.29
SNCB-202ENST00000393693 LGALS9BQ3B8N2 356 aa13.23□□□□□ -0.29
SNCB-202ENST00000393693 AMTNQ6UX39 209 aa13.23□□□□□ -0.29
SNCB-202ENST00000393693 GTSF1Q8WW33 167 aa13.23□□□□□ -0.29
SNCB-202ENST00000393693 KCNS1Q96KK3 526 aa13.23□□□□□ -0.29
SNCB-202ENST00000393693 TMA7Q9Y2S6 64 aaKnown RBP13.23□□□□□ -0.29
SNCB-202ENST00000393693 A0A1B0GW15 77 aa13.22□□□□□ -0.29
SNCB-202ENST00000393693 SPINK4O60575 86 aa13.22□□□□□ -0.29
SNCB-202ENST00000393693 MT-ND6P03923 174 aa13.22□□□□□ -0.29
SNCB-202ENST00000393693 S100A8P05109 93 aa13.22□□□□□ -0.29
SNCB-202ENST00000393693 SPART-AS1P0CW21 52 aa13.22□□□□□ -0.29
SNCB-202ENST00000393693 RIGQ13278 110 aa13.22□□□□□ -0.29
SNCB-202ENST00000393693 SPINK13Q1W4C9 94 aa13.22□□□□□ -0.29
SNCB-202ENST00000393693 FAM159AQ6UWV7 190 aa13.22□□□□□ -0.29
SNCB-202ENST00000393693 FER1L6-AS1Q8NA97 138 aa13.22□□□□□ -0.29
SNCB-202ENST00000393693 IGKV3D-20A0A0C4DH25 116 aa13.21□□□□□ -0.29
SNCB-202ENST00000393693 A0A1B0GUT8 65 aa13.21□□□□□ -0.29
SNCB-202ENST00000393693 F2Z2F3 143 aa13.21□□□□□ -0.29
SNCB-202ENST00000393693 M0R2Z0 102 aa13.21□□□□□ -0.29
SNCB-202ENST00000393693 MRPL54Q6P161 138 aaKnown RBP13.21□□□□□ -0.29
SNCB-202ENST00000393693 GNB1LQ9BYB4 327 aa13.21□□□□□ -0.29
SNCB-202ENST00000393693 NAGKQ9UJ70 344 aa13.21□□□□□ -0.29
SNCB-202ENST00000393693 TRAV12-3A0A0B4J271 114 aa13.2□□□□□ -0.3
SNCB-202ENST00000393693 GFI1BQ5VTD9 330 aa13.2□□□□□ -0.3
SNCB-202ENST00000393693 UBE2DNLQ8IWF7 75 aa13.2□□□□□ -0.3
SNCB-202ENST00000393693 TPPP3Q9BW30 176 aa13.2□□□□□ -0.3
SNCB-202ENST00000393693 TRAPPC1Q9Y5R8 145 aa13.2□□□□□ -0.3
SNCB-202ENST00000393693 GRIFINA4D1Z8 144 aa13.19□□□□□ -0.3
SNCB-202ENST00000393693 IGLC6P0CF74 106 aa13.19□□□□□ -0.3
SNCB-202ENST00000393693 ASIPP42127 132 aa13.19□□□□□ -0.3
SNCB-202ENST00000393693 RAB4BP61018 213 aa13.19□□□□□ -0.3
SNCB-202ENST00000393693 HBBP68871 147 aa13.19□□□□□ -0.3
SNCB-202ENST00000393693 FAM222AQ5U5X8 452 aa13.19□□□□□ -0.3
SNCB-202ENST00000393693 LYZL1Q6UWQ5 148 aa13.19□□□□□ -0.3
SNCB-202ENST00000393693 Q6ZR54 194 aa13.19□□□□□ -0.3
SNCB-202ENST00000393693 ZNF575Q86XF7 245 aa13.19□□□□□ -0.3
SNCB-202ENST00000393693 C20orf144Q9BQM9 153 aa13.19□□□□□ -0.3
SNCB-202ENST00000393693 KRTAP4-5Q9BYR2 181 aa13.19□□□□□ -0.3
SNCB-202ENST00000393693 C11orf21Q9P2W6 132 aa13.19□□□□□ -0.3
SNCB-202ENST00000393693 DKK2Q9UBU2 259 aa13.19□□□□□ -0.3
SNCB-202ENST00000393693 TRAV12-2A0A075B6T6 113 aa13.18□□□□□ -0.3
SNCB-202ENST00000393693 SMIM9A6NGZ8 99 aa13.18□□□□□ -0.3
SNCB-202ENST00000393693 SNURFLB1AK76 121 aa13.18□□□□□ -0.3
SNCB-202ENST00000393693 ZNF324O75467 553 aaPredicted RBP13.18□□□□□ -0.3
SNCB-202ENST00000393693 HLA-DQA1P01909 254 aa13.18□□□□□ -0.3
SNCB-202ENST00000393693 TRGC2P03986 189 aa13.18□□□□□ -0.3
SNCB-202ENST00000393693 HTN3P15516 51 aa13.18□□□□□ -0.3
SNCB-202ENST00000393693 S100A4P26447 101 aaKnown RBP13.18□□□□□ -0.3
SNCB-202ENST00000393693 CTRLP40313 264 aa13.18□□□□□ -0.3
SNCB-202ENST00000393693 KIR3DS1Q14943 382 aa13.18□□□□□ -0.3
SNCB-202ENST00000393693 ANXA2RQ3ZCQ2 193 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 173.4 ms