RNA–Protein interactions for RNA: ENST00000393368.2

HMGB3P1-201, Transcript of high mobility group box 3 pseudogene 1, humanhuman

BASIC

Gene HMGB3P1, Length 573 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P1-201ENST00000393368 PGPEP1LA6NFU8 196 aa5.3□□□□□ -1.56
HMGB3P1-201ENST00000393368 FABP5P3A8MUU1 101 aa5.3□□□□□ -1.56
HMGB3P1-201ENST00000393368 B4DEV8 164 aa5.3□□□□□ -1.56
HMGB3P1-201ENST00000393368 KRBOX1C9JBD0 128 aa5.3□□□□□ -1.56
HMGB3P1-201ENST00000393368 H3BVH4 76 aa5.3□□□□□ -1.56
HMGB3P1-201ENST00000393368 RTL8CO15255 209 aa5.3□□□□□ -1.56
HMGB3P1-201ENST00000393368 CCL18P55774 89 aa5.3□□□□□ -1.56
HMGB3P1-201ENST00000393368 RPL19P84098 196 aaKnown RBP5.3□□□□□ -1.56
HMGB3P1-201ENST00000393368 ZNF876PQ49A33 203 aa5.3□□□□□ -1.56
HMGB3P1-201ENST00000393368 ZNF506Q5JVG8 444 aa5.3□□□□□ -1.56
HMGB3P1-201ENST00000393368 EIF5AL1Q6IS14 154 aaKnown RBP5.3□□□□□ -1.56
HMGB3P1-201ENST00000393368 ALKAL2Q6UX46 152 aa5.3□□□□□ -1.56
HMGB3P1-201ENST00000393368 Q6ZR54 194 aa5.3□□□□□ -1.56
HMGB3P1-201ENST00000393368 TCEAL7Q9BRU2 100 aa5.3□□□□□ -1.56
HMGB3P1-201ENST00000393368 PRO0255Q9UI72 69 aa5.3□□□□□ -1.56
HMGB3P1-201ENST00000393368 ZFP30Q9Y2G7 519 aa5.3□□□□□ -1.56
HMGB3P1-201ENST00000393368 TRAV1-1A0A0B4J248 108 aa5.29□□□□□ -1.56
HMGB3P1-201ENST00000393368 TRBV6-1A0A0K0K1D8 114 aa5.29□□□□□ -1.56
HMGB3P1-201ENST00000393368 TMEM238LA0A1B0GVL6 79 aa5.29□□□□□ -1.56
HMGB3P1-201ENST00000393368 H3BNG1 76 aa5.29□□□□□ -1.56
HMGB3P1-201ENST00000393368 K7EQD1 137 aa5.29□□□□□ -1.56
HMGB3P1-201ENST00000393368 GYPEP15421 78 aa5.29□□□□□ -1.56
HMGB3P1-201ENST00000393368 S100A4P26447 101 aaKnown RBP5.29□□□□□ -1.56
HMGB3P1-201ENST00000393368 ASIPP42127 132 aa5.29□□□□□ -1.56
HMGB3P1-201ENST00000393368 RPL35P42766 123 aaKnown RBP5.29□□□□□ -1.56
HMGB3P1-201ENST00000393368 RAB5CP51148 216 aa5.29□□□□□ -1.56
HMGB3P1-201ENST00000393368 ZNF674Q2M3X9 581 aa5.29□□□□□ -1.56
HMGB3P1-201ENST00000393368 FAM162BQ5T6X4 162 aa5.29□□□□□ -1.56
HMGB3P1-201ENST00000393368 CFAP126Q5VTH2 177 aa5.29□□□□□ -1.56
HMGB3P1-201ENST00000393368 PRR27Q6MZM9 219 aa5.29□□□□□ -1.56
HMGB3P1-201ENST00000393368 ZNF575Q86XF7 245 aa5.29□□□□□ -1.56
HMGB3P1-201ENST00000393368 KRTAP1-5Q9BYS1 174 aa5.29□□□□□ -1.56
HMGB3P1-201ENST00000393368 JPT2Q9H910 190 aa5.29□□□□□ -1.56
HMGB3P1-201ENST00000393368 MANBALQ9NQG1 85 aa5.29□□□□□ -1.56
HMGB3P1-201ENST00000393368 ICOSQ9Y6W8 199 aa5.29□□□□□ -1.56
HMGB3P1-201ENST00000393368 PKHD1P08F94 4074 aa5.28□□□□□ -1.56
HMGB3P1-201ENST00000393368 NBDYA0A0U1RRE5 68 aa5.28□□□□□ -1.56
HMGB3P1-201ENST00000393368 RAB19A4D1S5 217 aa5.28□□□□□ -1.56
HMGB3P1-201ENST00000393368 RS1O15537 224 aa5.28□□□□□ -1.56
HMGB3P1-201ENST00000393368 ARMS2P0C7Q2 107 aa5.28□□□□□ -1.56
HMGB3P1-201ENST00000393368 COX8CQ7Z4L0 72 aa5.28□□□□□ -1.56
HMGB3P1-201ENST00000393368 BAGE2Q86Y30 109 aa5.28□□□□□ -1.56
HMGB3P1-201ENST00000393368 MLST8Q9BVC4 326 aa5.28□□□□□ -1.56
HMGB3P1-201ENST00000393368 SAMD10Q9BYL1 202 aa5.28□□□□□ -1.56
HMGB3P1-201ENST00000393368 Q9H8V8 135 aa5.28□□□□□ -1.56
HMGB3P1-201ENST00000393368 MRPS16Q9Y3D3 137 aaKnown RBP5.28□□□□□ -1.56
HMGB3P1-201ENST00000393368 NACAE9PAV3 2078 aa5.27□□□□□ -1.57
HMGB3P1-201ENST00000393368 MUC21A0A0G2JKD1 596 aa5.27□□□□□ -1.57
HMGB3P1-201ENST00000393368 MUC21A0A140T8X8 626 aa5.27□□□□□ -1.57
HMGB3P1-201ENST00000393368 TEX46H3BTG2 121 aa5.27□□□□□ -1.57
HMGB3P1-201ENST00000393368 IGLV2-8P01709 118 aa5.27□□□□□ -1.57
HMGB3P1-201ENST00000393368 BCL2P10415 239 aa5.27□□□□□ -1.57
HMGB3P1-201ENST00000393368 GATA1P15976 413 aaPredicted RBP5.27□□□□□ -1.57
HMGB3P1-201ENST00000393368 SRIP30626 198 aa5.27□□□□□ -1.57
HMGB3P1-201ENST00000393368 FAM3BP58499 235 aaPredicted RBP5.27□□□□□ -1.57
HMGB3P1-201ENST00000393368 MEF2BQ02080 365 aaPredicted RBP5.27□□□□□ -1.57
HMGB3P1-201ENST00000393368 CENPWQ5EE01 88 aa5.27□□□□□ -1.57
HMGB3P1-201ENST00000393368 LYPD5Q6UWN5 251 aa5.27□□□□□ -1.57
HMGB3P1-201ENST00000393368 Q6ZSN1 163 aa5.27□□□□□ -1.57
HMGB3P1-201ENST00000393368 SLC25A29Q8N8R3 303 aa5.27□□□□□ -1.57
HMGB3P1-201ENST00000393368 PCNPQ8WW12 178 aaKnown RBP5.27□□□□□ -1.57
HMGB3P1-201ENST00000393368 C11orf52Q96A22 123 aa5.27□□□□□ -1.57
HMGB3P1-201ENST00000393368 A0A087WWL8 130 aa5.26□□□□□ -1.57
HMGB3P1-201ENST00000393368 PRSS29PA6NIE9 313 aa5.26□□□□□ -1.57
HMGB3P1-201ENST00000393368 PRSS47A8MTI9 375 aa5.26□□□□□ -1.57
HMGB3P1-201ENST00000393368 FAM229AH3BQW9 127 aa5.26□□□□□ -1.57
HMGB3P1-201ENST00000393368 M0R381 172 aa5.26□□□□□ -1.57
HMGB3P1-201ENST00000393368 NXPH4O95158 308 aa5.26□□□□□ -1.57
HMGB3P1-201ENST00000393368 IFNA1P01562 189 aa5.26□□□□□ -1.57
HMGB3P1-201ENST00000393368 S100A9P06702 114 aaKnown RBP5.26□□□□□ -1.57
HMGB3P1-201ENST00000393368 MGST1P10620 155 aaKnown RBP5.26□□□□□ -1.57
HMGB3P1-201ENST00000393368 SSTP61278 116 aa5.26□□□□□ -1.57
HMGB3P1-201ENST00000393368 SLAQ13239 276 aa5.26□□□□□ -1.57
HMGB3P1-201ENST00000393368 MRPL23Q16540 153 aaKnown RBP5.26□□□□□ -1.57
HMGB3P1-201ENST00000393368 C1orf134Q5TEV5 83 aa5.26□□□□□ -1.57
HMGB3P1-201ENST00000393368 FAM74A4Q5TZK3 123 aa5.26□□□□□ -1.57
HMGB3P1-201ENST00000393368 NEGR1Q7Z3B1 354 aa5.26□□□□□ -1.57
HMGB3P1-201ENST00000393368 UPK3BQ9BT76 320 aa5.26□□□□□ -1.57
HMGB3P1-201ENST00000393368 PARLQ9H300 379 aa5.26□□□□□ -1.57
HMGB3P1-201ENST00000393368 MED9Q9NWA0 146 aa5.26□□□□□ -1.57
HMGB3P1-201ENST00000393368 IL36BQ9NZH7 164 aa5.26□□□□□ -1.57
HMGB3P1-201ENST00000393368 Q9UF83 564 aa5.26□□□□□ -1.57
HMGB3P1-201ENST00000393368 TRBV20OR9-2A0A075B6H5 130 aa5.25□□□□□ -1.57
HMGB3P1-201ENST00000393368 GZMBP10144 247 aa5.25□□□□□ -1.57
HMGB3P1-201ENST00000393368 GNG4P50150 75 aa5.25□□□□□ -1.57
HMGB3P1-201ENST00000393368 DNLZQ5SXM8 178 aa5.25□□□□□ -1.57
HMGB3P1-201ENST00000393368 WFDC10BQ8IUB3 73 aa5.25□□□□□ -1.57
HMGB3P1-201ENST00000393368 C14orf178Q8N769 122 aaPredicted RBP5.25□□□□□ -1.57
HMGB3P1-201ENST00000393368 OR10AG1Q8NH19 301 aa5.25□□□□□ -1.57
HMGB3P1-201ENST00000393368 PTH2Q96A98 100 aa5.25□□□□□ -1.57
HMGB3P1-201ENST00000393368 SCRT2Q9NQ03 307 aa5.25□□□□□ -1.57
HMGB3P1-201ENST00000393368 VAX2Q9UIW0 290 aa5.25□□□□□ -1.57
HMGB3P1-201ENST00000393368 PHLDA3Q9Y5J5 127 aa5.25□□□□□ -1.57
HMGB3P1-201ENST00000393368 DNAH5Q8TE73 4624 aa5.24□□□□□ -1.57
HMGB3P1-201ENST00000393368 MUC4Q99102 2169 aa5.24□□□□□ -1.57
HMGB3P1-201ENST00000393368 A0A1B0GVY2 172 aa5.24□□□□□ -1.57
HMGB3P1-201ENST00000393368 GAGE12JA6NER3 117 aa5.24□□□□□ -1.57
HMGB3P1-201ENST00000393368 A8MWV9 139 aa5.24□□□□□ -1.57
HMGB3P1-201ENST00000393368 SIVA1O15304 175 aa5.24□□□□□ -1.57
HMGB3P1-201ENST00000393368 PDE6DO43924 150 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms