RNA–Protein interactions for RNA: ENST00000393118.6

CALD1-203, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 4,281 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-203ENST00000393118 ATMQ13315 3056 aa8.18□□□□□ -1.1
CALD1-203ENST00000393118 LINC01549A6NIU2 74 aa8.17□□□□□ -1.1
CALD1-203ENST00000393118 ODF3BA8MYP8 253 aa8.17□□□□□ -1.1
CALD1-203ENST00000393118 IGHV4-38-2P0DP08 117 aa8.17□□□□□ -1.1
CALD1-203ENST00000393118 C12orf74Q32Q52 190 aa8.17□□□□□ -1.1
CALD1-203ENST00000393118 TMEM95Q3KNT9 176 aa8.17□□□□□ -1.1
CALD1-203ENST00000393118 MEIG1Q5JSS6 88 aa8.17□□□□□ -1.1
CALD1-203ENST00000393118 PRSS22Q9GZN4 317 aa8.17□□□□□ -1.1
CALD1-203ENST00000393118 SIRPDQ9H106 197 aa8.17□□□□□ -1.1
CALD1-203ENST00000393118 SPANXB1Q9NS25 103 aaPredicted RBP8.17□□□□□ -1.1
CALD1-203ENST00000393118 PRSS2P07478 247 aa8.17□□□□□ -1.1
CALD1-203ENST00000393118 YAE1D1Q9NRH1 226 aa8.17□□□□□ -1.1
CALD1-203ENST00000393118 DOPEY1Q5JWR5 2465 aa8.17□□□□□ -1.1
CALD1-203ENST00000393118 TRAV26-2A0A0B4J265 109 aa8.17□□□□□ -1.1
CALD1-203ENST00000393118 ZNF688P0C7X2 276 aa8.17□□□□□ -1.1
CALD1-203ENST00000393118 C2orf91Q6ZV80 131 aa8.17□□□□□ -1.1
CALD1-203ENST00000393118 PIP4P2Q8N4L2 257 aa8.17□□□□□ -1.1
CALD1-203ENST00000393118 RHPN1-AS1Q9BWJ2 59 aa8.17□□□□□ -1.1
CALD1-203ENST00000393118 AGPAT4-IT1Q9H0P7 198 aa8.17□□□□□ -1.1
CALD1-203ENST00000393118 LAMA5O15230 3695 aa8.17□□□□□ -1.1
CALD1-203ENST00000393118 A0A1B0GXF2 115 aa8.17□□□□□ -1.1
CALD1-203ENST00000393118 ZNF815PA8K554 130 aa8.17□□□□□ -1.1
CALD1-203ENST00000393118 DEFB1P60022 68 aa8.17□□□□□ -1.1
CALD1-203ENST00000393118 BLCAPP62952 87 aa8.17□□□□□ -1.1
CALD1-203ENST00000393118 CEND1Q8N111 149 aa8.17□□□□□ -1.1
CALD1-203ENST00000393118 A0A1W2PPR1 153 aa8.16□□□□□ -1.1
CALD1-203ENST00000393118 C9JAW5 83 aa8.16□□□□□ -1.1
CALD1-203ENST00000393118 SIVA1O15304 175 aa8.16□□□□□ -1.1
CALD1-203ENST00000393118 MSMBP08118 114 aa8.16□□□□□ -1.1
CALD1-203ENST00000393118 LGALS9BQ3B8N2 356 aa8.16□□□□□ -1.1
CALD1-203ENST00000393118 LGALS9CQ6DKI2 356 aa8.16□□□□□ -1.1
CALD1-203ENST00000393118 UFSP1Q6NVU6 142 aa8.16□□□□□ -1.1
CALD1-203ENST00000393118 TRAV8-4A0A0B4J246 113 aa8.16□□□□□ -1.1
CALD1-203ENST00000393118 B4DSR2 109 aa8.16□□□□□ -1.1
CALD1-203ENST00000393118 IFITM1P13164 125 aa8.16□□□□□ -1.1
CALD1-203ENST00000393118 GATA1P15976 413 aaPredicted RBP8.16□□□□□ -1.1
CALD1-203ENST00000393118 MRGPRG-AS1Q2M3A8 158 aa8.16□□□□□ -1.1
CALD1-203ENST00000393118 C14orf178Q8N769 122 aaPredicted RBP8.16□□□□□ -1.1
CALD1-203ENST00000393118 NXT2Q9NPJ8 142 aaKnown RBP8.16□□□□□ -1.1
CALD1-203ENST00000393118 KALRNO60229 2985 aa8.16□□□□□ -1.1
CALD1-203ENST00000393118 TRAV21A0A0B4J279 112 aa8.16□□□□□ -1.1
CALD1-203ENST00000393118 F6UB75 175 aa8.16□□□□□ -1.1
CALD1-203ENST00000393118 BUB3O43684 328 aa8.16□□□□□ -1.1
CALD1-203ENST00000393118 TNFRSF6BO95407 300 aa8.16□□□□□ -1.1
CALD1-203ENST00000393118 FOXE3Q13461 319 aa8.16□□□□□ -1.1
CALD1-203ENST00000393118 ZNF462Q96JM2 2506 aa8.15□□□□□ -1.1
CALD1-203ENST00000393118 EPG5Q9HCE0 2579 aa8.15□□□□□ -1.1
CALD1-203ENST00000393118 TMEM8BA6NDV4 472 aa8.15□□□□□ -1.1
CALD1-203ENST00000393118 ATP5LO75964 103 aa8.15□□□□□ -1.1
CALD1-203ENST00000393118 CD7P09564 240 aa8.15□□□□□ -1.1
CALD1-203ENST00000393118 LMO4P61968 165 aa8.15□□□□□ -1.1
CALD1-203ENST00000393118 C11orf71Q6IPW1 123 aa8.15□□□□□ -1.1
CALD1-203ENST00000393118 C9orf139Q6ZV77 190 aa8.15□□□□□ -1.1
CALD1-203ENST00000393118 TMEM158Q8WZ71 300 aa8.15□□□□□ -1.1
CALD1-203ENST00000393118 TRBV25-1A0A075B6N4 114 aa8.15□□□□□ -1.1
CALD1-203ENST00000393118 IGHV4-30-2A0A087WSY4 118 aa8.15□□□□□ -1.1
CALD1-203ENST00000393118 FOXI1Q12951 378 aa8.15□□□□□ -1.1
CALD1-203ENST00000393118 PSMG4Q5JS54 123 aa8.15□□□□□ -1.11
CALD1-203ENST00000393118 ZNF80P51504 273 aaPredicted RBP8.15□□□□□ -1.11
CALD1-203ENST00000393118 SNRPD3P62318 126 aaKnown RBP8.15□□□□□ -1.11
CALD1-203ENST00000393118 ZNF56Q15929 161 aa8.15□□□□□ -1.11
CALD1-203ENST00000393118 RAX2Q96IS3 184 aa8.15□□□□□ -1.11
CALD1-203ENST00000393118 SCGB3A1Q96QR1 104 aa8.15□□□□□ -1.11
CALD1-203ENST00000393118 TACC2O95359 2948 aa8.14□□□□□ -1.11
CALD1-203ENST00000393118 FAM223BA6NKX1 122 aa8.14□□□□□ -1.11
CALD1-203ENST00000393118 CRIP1P50238 77 aa8.14□□□□□ -1.11
CALD1-203ENST00000393118 Q6ZUT4 128 aa8.14□□□□□ -1.11
CALD1-203ENST00000393118 FAM223AQ8IWN6 122 aa8.14□□□□□ -1.11
CALD1-203ENST00000393118 NACAE9PAV3 2078 aa8.14□□□□□ -1.11
CALD1-203ENST00000393118 IGLV2-11P01706 119 aa8.14□□□□□ -1.11
CALD1-203ENST00000393118 GATA3P23771 443 aa8.14□□□□□ -1.11
CALD1-203ENST00000393118 RRN3P1Q2M238 152 aa8.14□□□□□ -1.11
CALD1-203ENST00000393118 C11orf44Q8N8P7 122 aa8.14□□□□□ -1.11
CALD1-203ENST00000393118 DYNLRB2Q8TF09 96 aa8.14□□□□□ -1.11
CALD1-203ENST00000393118 TMEM170BQ5T4T1 132 aa8.14□□□□□ -1.11
CALD1-203ENST00000393118 TRAV12-3A0A0B4J271 114 aa8.13□□□□□ -1.11
CALD1-203ENST00000393118 MRPL23Q16540 153 aaKnown RBP8.13□□□□□ -1.11
CALD1-203ENST00000393118 C5orf56Q8N8D9 126 aa8.13□□□□□ -1.11
CALD1-203ENST00000393118 IGHV3OR16-12A0A075B7B8 117 aa8.13□□□□□ -1.11
CALD1-203ENST00000393118 FSTL3O95633 263 aa8.13□□□□□ -1.11
CALD1-203ENST00000393118 OVOL1O14753 267 aa8.13□□□□□ -1.11
CALD1-203ENST00000393118 TRBV12-3P01733 135 aa8.13□□□□□ -1.11
CALD1-203ENST00000393118 PRB1P04280 392 aa8.13□□□□□ -1.11
CALD1-203ENST00000393118 LOXL1Q08397 574 aaPredicted RBP8.13□□□□□ -1.11
CALD1-203ENST00000393118 ZFHX4Q86UP3 3567 aa8.13□□□□□ -1.11
CALD1-203ENST00000393118 TMEM190Q8WZ59 177 aa8.12□□□□□ -1.11
CALD1-203ENST00000393118 ERG28Q9UKR5 140 aa8.12□□□□□ -1.11
CALD1-203ENST00000393118 DCHS1Q96JQ0 3298 aa8.12□□□□□ -1.11
CALD1-203ENST00000393118 USMG5Q96IX5 58 aa8.12□□□□□ -1.11
CALD1-203ENST00000393118 ZZEF1O43149 2961 aa8.12□□□□□ -1.11
CALD1-203ENST00000393118 RNF223E7ERA6 249 aa8.12□□□□□ -1.11
CALD1-203ENST00000393118 C9orf153Q5TBE3 101 aa8.12□□□□□ -1.11
CALD1-203ENST00000393118 CCDC140Q96MF4 163 aa8.12□□□□□ -1.11
CALD1-203ENST00000393118 DAZ1Q9NQZ3 744 aaKnown RBP8.12□□□□□ -1.11
CALD1-203ENST00000393118 SRSF1Q07955 248 aaKnown RBP eCLIP8.12□□□□□ -1.116e-8■■■■□ 19.9
CALD1-203ENST00000393118 LINC00477Q96M19 166 aa8.12□□□□□ -1.11
CALD1-203ENST00000393118 UNQ9165/PRO28630Q6UXU0 137 aa8.11□□□□□ -1.11
CALD1-203ENST00000393118 MRPL35Q9NZE8 188 aaKnown RBP8.11□□□□□ -1.11
CALD1-203ENST00000393118 TRAV2A0A0B4J234 112 aa8.11□□□□□ -1.11
CALD1-203ENST00000393118 SYNJ2BPP57105 145 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms