RNA–Protein interactions for RNA: ENST00000393091.6

USP44-202, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 3,161 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-202ENST00000393091 C15orf54Q8N8G6 183 aa9.41□□□□□ -0.9
USP44-202ENST00000393091 MUC4Q99102 2169 aa9.41□□□□□ -0.9
USP44-202ENST00000393091 ORM1P02763 201 aa9.41□□□□□ -0.9
USP44-202ENST00000393091 MUC21Q5SSG8 566 aa9.41□□□□□ -0.9
USP44-202ENST00000393091 FRZBQ92765 325 aa9.41□□□□□ -0.9
USP44-202ENST00000393091 GSN-AS1Q9NRJ2 163 aa9.41□□□□□ -0.9
USP44-202ENST00000393091 CELA1Q9UNI1 258 aa9.41□□□□□ -0.9
USP44-202ENST00000393091 TRAV4A0A0B4J268 109 aa9.4□□□□□ -0.9
USP44-202ENST00000393091 CXorf65A6NEN9 183 aa9.4□□□□□ -0.9
USP44-202ENST00000393091 GATCO43716 136 aaKnown RBP9.4□□□□□ -0.9
USP44-202ENST00000393091 RNASE7Q9H1E1 156 aaKnown RBP9.4□□□□□ -0.9
USP44-202ENST00000393091 RHEBQ15382 184 aa9.4□□□□□ -0.9
USP44-202ENST00000393091 FAM222AQ5U5X8 452 aa9.4□□□□□ -0.9
USP44-202ENST00000393091 OR10G8Q8NGN5 311 aa9.4□□□□□ -0.9
USP44-202ENST00000393091 WWC2-AS2Q96NR7 200 aa9.4□□□□□ -0.9
USP44-202ENST00000393091 TRAV9-1A0A075B6T8 112 aa9.4□□□□□ -0.91
USP44-202ENST00000393091 TCTAP57738 103 aa9.4□□□□□ -0.91
USP44-202ENST00000393091 ZFP82Q8N141 532 aa9.4□□□□□ -0.91
USP44-202ENST00000393091 F8W036 122 aa9.39□□□□□ -0.91
USP44-202ENST00000393091 OR2D3Q8NGH3 330 aa9.39□□□□□ -0.91
USP44-202ENST00000393091 C11orf45Q8TAV5 145 aa9.39□□□□□ -0.91
USP44-202ENST00000393091 GTSF1Q8WW33 167 aa9.39□□□□□ -0.91
USP44-202ENST00000393091 TENM3Q9P273 2699 aa9.39□□□□□ -0.91
USP44-202ENST00000393091 NACAE9PAV3 2078 aa9.39□□□□□ -0.91
USP44-202ENST00000393091 IGHV3OR16-12A0A075B7B8 117 aa9.39□□□□□ -0.91
USP44-202ENST00000393091 PRM2P04554 102 aa9.39□□□□□ -0.91
USP44-202ENST00000393091 ARMS2P0C7Q2 107 aa9.39□□□□□ -0.91
USP44-202ENST00000393091 ERVFC1-1P60608 527 aa9.39□□□□□ -0.91
USP44-202ENST00000393091 FER1L6-AS1Q8NA97 138 aa9.38□□□□□ -0.91
USP44-202ENST00000393091 NOP10Q9NPE3 64 aaKnown RBP9.38□□□□□ -0.91
USP44-202ENST00000393091 A0A1B0GW15 77 aa9.38□□□□□ -0.91
USP44-202ENST00000393091 A8MWV9 139 aa9.38□□□□□ -0.91
USP44-202ENST00000393091 DMRTA1Q5VZB9 504 aa9.38□□□□□ -0.91
USP44-202ENST00000393091 PRR27Q6MZM9 219 aa9.38□□□□□ -0.91
USP44-202ENST00000393091 SYT8Q8NBV8 401 aa9.38□□□□□ -0.91
USP44-202ENST00000393091 ADIRFQ15847 76 aa9.38□□□□□ -0.91
USP44-202ENST00000393091 KIF25-AS1Q9Y6Z4 181 aa9.38□□□□□ -0.91
USP44-202ENST00000393091 RPL19P84098 196 aaKnown RBP9.37□□□□□ -0.91
USP44-202ENST00000393091 NAGKQ9UJ70 344 aa9.37□□□□□ -0.91
USP44-202ENST00000393091 MT-ND4LP03901 98 aa9.37□□□□□ -0.91
USP44-202ENST00000393091 CEBPGP53567 150 aa9.37□□□□□ -0.91
USP44-202ENST00000393091 DNAH6Q9C0G6 4158 aa9.37□□□□□ -0.91
USP44-202ENST00000393091 TRAV10A0A0B4J240 114 aa9.36□□□□□ -0.91
USP44-202ENST00000393091 Q6ZTI0 123 aa9.36□□□□□ -0.91
USP44-202ENST00000393091 C3orf84H3BNL1 204 aa9.36□□□□□ -0.91
USP44-202ENST00000393091 SLAQ13239 276 aa9.36□□□□□ -0.91
USP44-202ENST00000393091 CFAP126Q5VTH2 177 aa9.36□□□□□ -0.91
USP44-202ENST00000393091 ATP5L2Q7Z4Y8 100 aa9.36□□□□□ -0.91
USP44-202ENST00000393091 NAT8BQ9UHF3 227 aa9.36□□□□□ -0.91
USP44-202ENST00000393091 CLRN3Q8NCR9 226 aa9.36□□□□□ -0.91
USP44-202ENST00000393091 H3BVH4 76 aa9.35□□□□□ -0.91
USP44-202ENST00000393091 RHODO00212 210 aa9.35□□□□□ -0.91
USP44-202ENST00000393091 RASL11AQ6T310 242 aa9.35□□□□□ -0.91
USP44-202ENST00000393091 RNF212Q495C1 297 aa9.35□□□□□ -0.91
USP44-202ENST00000393091 SVBPQ8N300 66 aa9.35□□□□□ -0.91
USP44-202ENST00000393091 A0A1B0GXF2 115 aa9.34□□□□□ -0.91
USP44-202ENST00000393091 NUPR2A6NF83 97 aa9.34□□□□□ -0.91
USP44-202ENST00000393091 ATP5G1P05496 136 aa9.34□□□□□ -0.91
USP44-202ENST00000393091 LINC00315P59091 139 aa9.34□□□□□ -0.91
USP44-202ENST00000393091 DAD1P61803 113 aa9.34□□□□□ -0.91
USP44-202ENST00000393091 ALMS1Q8TCU4 4167 aa9.34□□□□□ -0.91
USP44-202ENST00000393091 M0R036 132 aa9.34□□□□□ -0.91
USP44-202ENST00000393091 CRYGDP07320 174 aa9.34□□□□□ -0.91
USP44-202ENST00000393091 LINC00694P0DN24 101 aa9.34□□□□□ -0.91
USP44-202ENST00000393091 S100A4P26447 101 aaKnown RBP9.34□□□□□ -0.91
USP44-202ENST00000393091 LYZL1Q6UWQ5 148 aa9.34□□□□□ -0.91
USP44-202ENST00000393091 DNAH1Q9P2D7 4330 aa9.34□□□□□ -0.91
USP44-202ENST00000393091 CSMD3Q7Z407 3707 aa9.34□□□□□ -0.91
USP44-202ENST00000393091 GRIFINA4D1Z8 144 aa9.34□□□□□ -0.91
USP44-202ENST00000393091 SNAPINO95295 136 aa9.34□□□□□ -0.91
USP44-202ENST00000393091 FHL2Q14192 279 aa9.34□□□□□ -0.91
USP44-202ENST00000393091 ZNF876PQ49A33 203 aa9.34□□□□□ -0.91
USP44-202ENST00000393091 PHLDA3Q9Y5J5 127 aa9.34□□□□□ -0.91
USP44-202ENST00000393091 GATA1P15976 413 aaPredicted RBP9.33□□□□□ -0.92
USP44-202ENST00000393091 NUP35Q8NFH5 326 aa9.33□□□□□ -0.92
USP44-202ENST00000393091 OR10AG1Q8NH19 301 aa9.33□□□□□ -0.92
USP44-202ENST00000393091 RAB4BP61018 213 aa9.33□□□□□ -0.92
USP44-202ENST00000393091 CEMP1Q6PRD7 247 aaPredicted RBP9.33□□□□□ -0.92
USP44-202ENST00000393091 TRBV6-4A0A1B0GX49 114 aa9.32□□□□□ -0.92
USP44-202ENST00000393091 MUC7Q8TAX7 377 aa9.32□□□□□ -0.92
USP44-202ENST00000393091 MRPL16Q9NX20 251 aaKnown RBP9.32□□□□□ -0.92
USP44-202ENST00000393091 TRGV1A0A0A0MS02 117 aa9.32□□□□□ -0.92
USP44-202ENST00000393091 HIGD1CA8MV81 97 aa9.32□□□□□ -0.92
USP44-202ENST00000393091 DEFB4AO15263 64 aa9.32□□□□□ -0.92
USP44-202ENST00000393091 NANOS2P60321 138 aaKnown RBP9.32□□□□□ -0.92
USP44-202ENST00000393091 YPEL4Q96NS1 127 aa9.32□□□□□ -0.92
USP44-202ENST00000393091 Q6ZTC4 211 aa9.32□□□□□ -0.92
USP44-202ENST00000393091 SLC7A5P1Q8MH63 180 aa9.32□□□□□ -0.92
USP44-202ENST00000393091 A0A1B0GUT8 65 aa9.31□□□□□ -0.92
USP44-202ENST00000393091 C7orf77A4D0Y5 90 aa9.31□□□□□ -0.92
USP44-202ENST00000393091 TRGC1P0CF51 173 aa9.31□□□□□ -0.92
USP44-202ENST00000393091 GZMBP10144 247 aa9.31□□□□□ -0.92
USP44-202ENST00000393091 HTN1P15515 57 aa9.31□□□□□ -0.92
USP44-202ENST00000393091 HOXA5P20719 270 aa9.31□□□□□ -0.92
USP44-202ENST00000393091 TRAV26-1A0A087WT03 109 aa9.31□□□□□ -0.92
USP44-202ENST00000393091 AP1S3Q96PC3 154 aa9.31□□□□□ -0.92
USP44-202ENST00000393091 TMEM191AQ9H0A3 160 aa9.31□□□□□ -0.92
USP44-202ENST00000393091 TMSB15BA0A087X1C1 80 aa9.3□□□□□ -0.92
USP44-202ENST00000393091 IGHV3-53P01767 116 aa9.3□□□□□ -0.92
USP44-202ENST00000393091 TIRAPP58753 221 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms