RNA–Protein interactions for RNA: ENST00000392903.3

SHTN1-204, Transcript of shootin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHTN1, Length 2,400 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHTN1-204ENST00000392903 LGALS1P09382 135 aaKnown RBP11.48□□□□□ -0.57
SHTN1-204ENST00000392903 UBE2D1P51668 147 aa11.48□□□□□ -0.57
SHTN1-204ENST00000392903 CSPG4Q6UVK1 2322 aa11.48□□□□□ -0.57
SHTN1-204ENST00000392903 IGHV4-61A0A0C4DH41 118 aa11.47□□□□□ -0.57
SHTN1-204ENST00000392903 IGHV3-66A0A0C4DH42 116 aa11.47□□□□□ -0.57
SHTN1-204ENST00000392903 HLA-DMBP28068 263 aa11.47□□□□□ -0.57
SHTN1-204ENST00000392903 UBE2D3P61077 147 aa11.47□□□□□ -0.57
SHTN1-204ENST00000392903 UBE2D2P62837 147 aa11.47□□□□□ -0.57
SHTN1-204ENST00000392903 CLEC19AQ6UXS0 136 aa11.47□□□□□ -0.57
SHTN1-204ENST00000392903 FAM110DQ8TAY7 271 aaPredicted RBP11.47□□□□□ -0.57
SHTN1-204ENST00000392903 GLMPQ8WWB7 406 aa11.47□□□□□ -0.57
SHTN1-204ENST00000392903 SMAD5-AS1Q9Y6J3 95 aa11.47□□□□□ -0.57
SHTN1-204ENST00000392903 FAM208BQ5VWN6 2430 aa11.47□□□□□ -0.57
SHTN1-204ENST00000392903 POLQO75417 2590 aa11.47□□□□□ -0.57
SHTN1-204ENST00000392903 TRGV3P03979 118 aa11.47□□□□□ -0.57
SHTN1-204ENST00000392903 TEN1Q86WV5 123 aa11.47□□□□□ -0.57
SHTN1-204ENST00000392903 CCL19Q99731 98 aa11.47□□□□□ -0.57
SHTN1-204ENST00000392903 LINC01549A6NIU2 74 aa11.46□□□□□ -0.57
SHTN1-204ENST00000392903 RNF183Q96D59 192 aa11.46□□□□□ -0.57
SHTN1-204ENST00000392903 CARD19Q96LW7 228 aa11.46□□□□□ -0.57
SHTN1-204ENST00000392903 USP9YO00507 2555 aaPredicted RBP11.46□□□□□ -0.57
SHTN1-204ENST00000392903 PSMB2P49721 201 aa11.46□□□□□ -0.58
SHTN1-204ENST00000392903 TMEM78Q5T7P6 136 aa11.46□□□□□ -0.58
SHTN1-204ENST00000392903 IGHV3-49A0A0A0MS15 119 aa11.45□□□□□ -0.58
SHTN1-204ENST00000392903 LYRM7Q5U5X0 104 aa11.45□□□□□ -0.58
SHTN1-204ENST00000392903 IGKV3D-20A0A0C4DH25 116 aa11.45□□□□□ -0.58
SHTN1-204ENST00000392903 SCGB2A1O75556 95 aa11.45□□□□□ -0.58
SHTN1-204ENST00000392903 C5orf56Q8N8D9 126 aa11.45□□□□□ -0.58
SHTN1-204ENST00000392903 LRRK2Q5S007 2527 aa11.44□□□□□ -0.58
SHTN1-204ENST00000392903 TRAV26-2A0A0B4J265 109 aa11.44□□□□□ -0.58
SHTN1-204ENST00000392903 ZFP2Q6ZN57 461 aa11.44□□□□□ -0.58
SHTN1-204ENST00000392903 CCDC140Q96MF4 163 aa11.44□□□□□ -0.58
SHTN1-204ENST00000392903 LOC107984156A0A0G2JMH3 177 aa11.44□□□□□ -0.58
SHTN1-204ENST00000392903 GATA3P23771 443 aa11.44□□□□□ -0.58
SHTN1-204ENST00000392903 ERCC8Q13216 396 aa11.44□□□□□ -0.58
SHTN1-204ENST00000392903 SBSPONQ8IVN8 264 aa11.44□□□□□ -0.58
SHTN1-204ENST00000392903 ARL17AQ8IVW1 177 aa11.44□□□□□ -0.58
SHTN1-204ENST00000392903 NEXN-AS1Q8NBZ9 246 aa11.44□□□□□ -0.58
SHTN1-204ENST00000392903 PTH2Q96A98 100 aa11.44□□□□□ -0.58
SHTN1-204ENST00000392903 PIMREGQ9BSJ6 248 aa11.44□□□□□ -0.58
SHTN1-204ENST00000392903 ZANQ9Y493 2812 aa11.43□□□□□ -0.58
SHTN1-204ENST00000392903 RBAKDNA6NC62 111 aa11.43□□□□□ -0.58
SHTN1-204ENST00000392903 IGHV4-38-2P0DP08 117 aa11.43□□□□□ -0.58
SHTN1-204ENST00000392903 SLC25A16P16260 332 aa11.43□□□□□ -0.58
SHTN1-204ENST00000392903 ATP5J2P56134 94 aa11.43□□□□□ -0.58
SHTN1-204ENST00000392903 ZNF462Q96JM2 2506 aa11.43□□□□□ -0.58
SHTN1-204ENST00000392903 CD7P09564 240 aa11.43□□□□□ -0.58
SHTN1-204ENST00000392903 LY6EQ16553 131 aa11.43□□□□□ -0.58
SHTN1-204ENST00000392903 NRGNQ92686 78 aa11.43□□□□□ -0.58
SHTN1-204ENST00000392903 TOMM6Q96B49 74 aa11.43□□□□□ -0.58
SHTN1-204ENST00000392903 PRADC1Q9BSG0 188 aa11.43□□□□□ -0.58
SHTN1-204ENST00000392903 SMIM2Q9BVW6 85 aa11.43□□□□□ -0.58
SHTN1-204ENST00000392903 C11orf21Q9P2W6 132 aa11.43□□□□□ -0.58
SHTN1-204ENST00000392903 USP24Q9UPU5 2620 aa11.42□□□□□ -0.58
SHTN1-204ENST00000392903 IGHV4-4A0A075B6R2 117 aa11.42□□□□□ -0.58
SHTN1-204ENST00000392903 IGHV4-30-2A0A087WSY4 118 aa11.42□□□□□ -0.58
SHTN1-204ENST00000392903 IGHV1-69DA0A0B4J2H0 117 aa11.42□□□□□ -0.58
SHTN1-204ENST00000392903 IGHV7-4-1A0A0J9YVY3 117 aa11.42□□□□□ -0.58
SHTN1-204ENST00000392903 IGHV1-69P01742 117 aa11.42□□□□□ -0.58
SHTN1-204ENST00000392903 RNF182Q8N6D2 247 aa11.42□□□□□ -0.58
SHTN1-204ENST00000392903 ANAPC13Q9BS18 74 aa11.42□□□□□ -0.58
SHTN1-204ENST00000392903 ZFAND3Q9H8U3 227 aa11.42□□□□□ -0.58
SHTN1-204ENST00000392903 TRBV20-1A0A075B6N2 111 aa11.41□□□□□ -0.58
SHTN1-204ENST00000392903 PRSS29PA6NIE9 313 aa11.41□□□□□ -0.58
SHTN1-204ENST00000392903 ZNF815PA8K554 130 aa11.41□□□□□ -0.58
SHTN1-204ENST00000392903 BUB3O43684 328 aa11.41□□□□□ -0.58
SHTN1-204ENST00000392903 ZNF688P0C7X2 276 aa11.41□□□□□ -0.58
SHTN1-204ENST00000392903 ORMDL2Q53FV1 153 aa11.41□□□□□ -0.58
SHTN1-204ENST00000392903 C10orf105Q8TEF2 133 aa11.41□□□□□ -0.58
SHTN1-204ENST00000392903 SCGB3A1Q96QR1 104 aa11.41□□□□□ -0.58
SHTN1-204ENST00000392903 UFC1Q9Y3C8 167 aa11.41□□□□□ -0.58
SHTN1-204ENST00000392903 PRAC2D3DTV9 90 aa11.41□□□□□ -0.58
SHTN1-204ENST00000392903 COX6B1P14854 86 aa11.41□□□□□ -0.58
SHTN1-204ENST00000392903 ANKRD17O75179 2603 aaKnown RBP11.41□□□□□ -0.58
SHTN1-204ENST00000392903 CLPSL1A2RUU4 121 aa11.4□□□□□ -0.58
SHTN1-204ENST00000392903 GAGE5Q13069 117 aa11.4□□□□□ -0.58
SHTN1-204ENST00000392903 GAGE6Q13070 117 aa11.4□□□□□ -0.58
SHTN1-204ENST00000392903 SRSF9Q13242 221 aaKnown RBP eCLIP11.4□□□□□ -0.58
SHTN1-204ENST00000392903 ZFAND6Q6FIF0 208 aa11.4□□□□□ -0.58
SHTN1-204ENST00000392903 TMEM262E9PQX1 116 aa11.4□□□□□ -0.58
SHTN1-204ENST00000392903 SCGB1D4Q6XE38 83 aa11.4□□□□□ -0.58
SHTN1-204ENST00000392903 EEF1AKMT3Q96AZ1 226 aa11.4□□□□□ -0.58
SHTN1-204ENST00000392903 SLC50A1Q9BRV3 221 aa11.4□□□□□ -0.58
SHTN1-204ENST00000392903 TRAV41A0A0B4J266 112 aa11.39□□□□□ -0.59
SHTN1-204ENST00000392903 A8MWV9 139 aa11.39□□□□□ -0.59
SHTN1-204ENST00000392903 TCL1BO95988 128 aa11.39□□□□□ -0.59
SHTN1-204ENST00000392903 SFTA2Q6UW10 78 aa11.39□□□□□ -0.59
SHTN1-204ENST00000392903 NDUFA11Q86Y39 141 aa11.39□□□□□ -0.59
SHTN1-204ENST00000392903 PLEKHB2Q96CS7 222 aa11.39□□□□□ -0.59
SHTN1-204ENST00000392903 MOB4Q9Y3A3 225 aa11.39□□□□□ -0.59
SHTN1-204ENST00000392903 CITED1Q99966 193 aa11.39□□□□□ -0.59
SHTN1-204ENST00000392903 TEX29Q8N6K0 151 aa11.38□□□□□ -0.59
SHTN1-204ENST00000392903 BAALCQ8WXS3 180 aa11.38□□□□□ -0.59
SHTN1-204ENST00000392903 KLK15Q9H2R5 256 aa11.38□□□□□ -0.59
SHTN1-204ENST00000392903 SS18L2Q9UHA2 77 aa11.38□□□□□ -0.59
SHTN1-204ENST00000392903 TRBV7-1A0A0A6YYK4 115 aa11.37□□□□□ -0.59
SHTN1-204ENST00000392903 PRB1P04280 392 aa11.37□□□□□ -0.59
SHTN1-204ENST00000392903 SPANXN1Q5VSR9 72 aa11.37□□□□□ -0.59
SHTN1-204ENST00000392903 RASL10AQ92737 203 aa11.37□□□□□ -0.59
SHTN1-204ENST00000392903 H3BUX3 64 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms