RNA–Protein interactions for RNA: ENST00000390520.1

TRAJ17-201, Transcript of T cell receptor alpha joining 17, humanhuman

APPRIS P1 BASIC

Gene TRAJ17, Length 63 nt, Biotype TR J gene, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ17-201ENST00000390520 RPL28P46779 137 aaKnown RBP2.3□□□□□ -2.04
TRAJ17-201ENST00000390520 XCL1P47992 114 aa2.3□□□□□ -2.04
TRAJ17-201ENST00000390520 LYZP61626 148 aa2.3□□□□□ -2.04
TRAJ17-201ENST00000390520 S100A7L2Q5SY68 101 aa2.3□□□□□ -2.04
TRAJ17-201ENST00000390520 RPL7L1Q6DKI1 246 aaKnown RBP2.3□□□□□ -2.04
TRAJ17-201ENST00000390520 ZNF826PQ6ZT77 177 aa2.3□□□□□ -2.04
TRAJ17-201ENST00000390520 VMO1Q7Z5L0 202 aa2.3□□□□□ -2.04
TRAJ17-201ENST00000390520 RPRMLQ8N4K4 120 aa2.3□□□□□ -2.04
TRAJ17-201ENST00000390520 ZNF525Q8N782 197 aa2.3□□□□□ -2.04
TRAJ17-201ENST00000390520 Q8N9W7 124 aa2.3□□□□□ -2.04
TRAJ17-201ENST00000390520 TP53TG3Q9ULZ0 132 aa2.3□□□□□ -2.04
TRAJ17-201ENST00000390520 COL4A6Q14031 1691 aa2.3□□□□□ -2.04
TRAJ17-201ENST00000390520 BAZ2BQ9UIF8 2168 aaKnown RBP2.29□□□□□ -2.04
TRAJ17-201ENST00000390520 SCN3AQ9NY46 2000 aa2.29□□□□□ -2.04
TRAJ17-201ENST00000390520 MGAMO43451 1857 aa2.29□□□□□ -2.04
TRAJ17-201ENST00000390520 AGLP35573 1532 aa2.29□□□□□ -2.04
TRAJ17-201ENST00000390520 IGKV2D-26A0A0A0MRZ7 120 aa2.29□□□□□ -2.04
TRAJ17-201ENST00000390520 TRBV6-7A0A0A0MS04 114 aa2.29□□□□□ -2.04
TRAJ17-201ENST00000390520 IGHV1-3A0A0C4DH29 117 aa2.29□□□□□ -2.04
TRAJ17-201ENST00000390520 A6NED7 52 aa2.29□□□□□ -2.04
TRAJ17-201ENST00000390520 H3BMM0 161 aa2.29□□□□□ -2.04
TRAJ17-201ENST00000390520 TRGV3P03979 118 aa2.29□□□□□ -2.04
TRAJ17-201ENST00000390520 CLPSP04118 112 aa2.29□□□□□ -2.04
TRAJ17-201ENST00000390520 TLX1NBP0CAT3 122 aa2.29□□□□□ -2.04
TRAJ17-201ENST00000390520 SMIM11AP58511 58 aa2.29□□□□□ -2.04
TRAJ17-201ENST00000390520 UBE2D3P61077 147 aa2.29□□□□□ -2.04
TRAJ17-201ENST00000390520 UBE2D2P62837 147 aa2.29□□□□□ -2.04
TRAJ17-201ENST00000390520 ZNF117Q03924 483 aa2.29□□□□□ -2.04
TRAJ17-201ENST00000390520 Q6ZTC4 211 aa2.29□□□□□ -2.04
TRAJ17-201ENST00000390520 CYB561D1Q8N8Q1 229 aa2.29□□□□□ -2.04
TRAJ17-201ENST00000390520 MUC7Q8TAX7 377 aa2.29□□□□□ -2.04
TRAJ17-201ENST00000390520 CIRBP-AS1Q8TBR5 109 aa2.29□□□□□ -2.04
TRAJ17-201ENST00000390520 UBE2WQ96B02 151 aa2.29□□□□□ -2.04
TRAJ17-201ENST00000390520 SMIM7Q9BQ49 75 aa2.29□□□□□ -2.04
TRAJ17-201ENST00000390520 TIMM21Q9BVV7 248 aa2.29□□□□□ -2.04
TRAJ17-201ENST00000390520 CYP4F30PQ9H0H9 118 aa2.29□□□□□ -2.04
TRAJ17-201ENST00000390520 DIDO1Q9BTC0 2240 aaKnown RBP2.29□□□□□ -2.04
TRAJ17-201ENST00000390520 TRIP12Q14669 1992 aaPredicted RBP2.29□□□□□ -2.04
TRAJ17-201ENST00000390520 KIAA1549Q9HCM3 1950 aa2.29□□□□□ -2.04
TRAJ17-201ENST00000390520 BRWD3Q6RI45 1802 aa2.28□□□□□ -2.04
TRAJ17-201ENST00000390520 POLR1AO95602 1720 aaPredicted RBP2.28□□□□□ -2.04
TRAJ17-201ENST00000390520 NESP48681 1621 aa2.28□□□□□ -2.04
TRAJ17-201ENST00000390520 ADCY10Q96PN6 1610 aa2.28□□□□□ -2.04
TRAJ17-201ENST00000390520 NEXMIFQ5QGS0 1516 aa2.28□□□□□ -2.04
TRAJ17-201ENST00000390520 COL2A1P02458 1487 aaPredicted RBP2.28□□□□□ -2.04
TRAJ17-201ENST00000390520 TRBV7-1A0A0A6YYK4 115 aa2.28□□□□□ -2.04
TRAJ17-201ENST00000390520 TMEM223A0PJW6 202 aa2.28□□□□□ -2.04
TRAJ17-201ENST00000390520 IGHV4-34P06331 123 aa2.28□□□□□ -2.04
TRAJ17-201ENST00000390520 FXYD2P54710 66 aa2.28□□□□□ -2.04
TRAJ17-201ENST00000390520 GTF3C1Q12789 2109 aa2.28□□□□□ -2.04
TRAJ17-201ENST00000390520 ZNF56Q15929 161 aa2.28□□□□□ -2.04
TRAJ17-201ENST00000390520 ZNF627Q7L945 461 aa2.28□□□□□ -2.04
TRAJ17-201ENST00000390520 DEFB107AQ8IZN7 70 aa2.28□□□□□ -2.04
TRAJ17-201ENST00000390520 Q8N1X5 172 aa2.28□□□□□ -2.04
TRAJ17-201ENST00000390520 FAM167A-AS1Q96KT0 104 aa2.28□□□□□ -2.04
TRAJ17-201ENST00000390520 GOLGA2P5Q9HBQ8 144 aa2.28□□□□□ -2.04
TRAJ17-201ENST00000390520 GREB1Q4ZG55 1949 aa2.28□□□□□ -2.04
TRAJ17-201ENST00000390520 TSC2P49815 1807 aa2.28□□□□□ -2.04
TRAJ17-201ENST00000390520 AFDNP55196 1824 aaKnown RBP2.28□□□□□ -2.04
TRAJ17-201ENST00000390520 PLCH1Q4KWH8 1693 aa2.28□□□□□ -2.05
TRAJ17-201ENST00000390520 ALKQ9UM73 1620 aa2.28□□□□□ -2.05
TRAJ17-201ENST00000390520 ARHGEF5Q12774 1597 aa2.27□□□□□ -2.05
TRAJ17-201ENST00000390520 SAMD9Q5K651 1589 aa2.27□□□□□ -2.05
TRAJ17-201ENST00000390520 TRPM2O94759 1503 aa2.27□□□□□ -2.05
TRAJ17-201ENST00000390520 COL3A1P02461 1466 aaPredicted RBP2.27□□□□□ -2.05
TRAJ17-201ENST00000390520 LCTP09848 1927 aa2.27□□□□□ -2.05
TRAJ17-201ENST00000390520 PTPRSQ13332 1948 aa2.27□□□□□ -2.05
TRAJ17-201ENST00000390520 TRBV7-3A0A075B6L6 115 aa2.27□□□□□ -2.05
TRAJ17-201ENST00000390520 IGHV3-73A0A0B4J1V6 119 aa2.27□□□□□ -2.05
TRAJ17-201ENST00000390520 A0A0G2JND7 137 aa2.27□□□□□ -2.05
TRAJ17-201ENST00000390520 TRBV10-3A0A0K0K1G6 114 aa2.27□□□□□ -2.05
TRAJ17-201ENST00000390520 FXYD1O00168 92 aa2.27□□□□□ -2.05
TRAJ17-201ENST00000390520 CFC1BP0CG36 223 aa2.27□□□□□ -2.05
TRAJ17-201ENST00000390520 RPL36AP83881 106 aaKnown RBP2.27□□□□□ -2.05
TRAJ17-201ENST00000390520 C9orf116Q5BN46 136 aaPredicted RBP2.27□□□□□ -2.05
TRAJ17-201ENST00000390520 C1orf134Q5TEV5 83 aa2.27□□□□□ -2.05
TRAJ17-201ENST00000390520 SMIM29Q86T20 159 aa2.27□□□□□ -2.05
TRAJ17-201ENST00000390520 FAM223AQ8IWN6 122 aa2.27□□□□□ -2.05
TRAJ17-201ENST00000390520 C1orf64Q8NEQ6 169 aa2.27□□□□□ -2.05
TRAJ17-201ENST00000390520 FGF22Q9HCT0 170 aa2.27□□□□□ -2.05
TRAJ17-201ENST00000390520 DYNLRB1Q9NP97 96 aa2.27□□□□□ -2.05
TRAJ17-201ENST00000390520 CDC42SE1Q9NRR8 79 aa2.27□□□□□ -2.05
TRAJ17-201ENST00000390520 TRAPPC1Q9Y5R8 145 aa2.27□□□□□ -2.05
TRAJ17-201ENST00000390520 SIPA1L2Q9P2F8 1722 aaPredicted RBP2.27□□□□□ -2.05
TRAJ17-201ENST00000390520 CICQ96RK0 1608 aaPredicted RBP2.27□□□□□ -2.05
TRAJ17-201ENST00000390520 EML5Q05BV3 1969 aa2.27□□□□□ -2.05
TRAJ17-201ENST00000390520 SLIT2O94813 1529 aa2.27□□□□□ -2.05
TRAJ17-201ENST00000390520 CD163L1Q9NR16 1453 aa2.26□□□□□ -2.05
TRAJ17-201ENST00000390520 MED13Q9UHV7 2174 aa2.26□□□□□ -2.05
TRAJ17-201ENST00000390520 LOC285556D6RIA3 1793 aa2.26□□□□□ -2.05
TRAJ17-201ENST00000390520 DOCK9Q9BZ29 2069 aa2.26□□□□□ -2.05
TRAJ17-201ENST00000390520 TRAV7A0A075B6U4 112 aa2.26□□□□□ -2.05
TRAJ17-201ENST00000390520 LOC107984156A0A0G2JMH3 177 aa2.26□□□□□ -2.05
TRAJ17-201ENST00000390520 TRBV10-2A0A0K0K1G8 114 aa2.26□□□□□ -2.05
TRAJ17-201ENST00000390520 C2orf70A6NJV1 201 aa2.26□□□□□ -2.05
TRAJ17-201ENST00000390520 HCG22E2RYF7 251 aa2.26□□□□□ -2.05
TRAJ17-201ENST00000390520 C5orf67F2Z3F1 127 aa2.26□□□□□ -2.05
TRAJ17-201ENST00000390520 INSP01308 110 aa2.26□□□□□ -2.05
TRAJ17-201ENST00000390520 GCHFRP30047 84 aa2.26□□□□□ -2.05
TRAJ17-201ENST00000390520 KLF9Q13886 244 aaPredicted RBP2.26□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 96.7 ms