RNA–Protein interactions for RNA: ENST00000383836.7

SRGAP3-202, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRGAP3, Length 8,656 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-202ENST00000383836 LINC01620Q4KN68 170 aa9.86□□□□□ -0.83
SRGAP3-202ENST00000383836 PKIGQ9Y2B9 76 aa9.86□□□□□ -0.83
SRGAP3-202ENST00000383836 PRB1P04280 392 aa9.86□□□□□ -0.83
SRGAP3-202ENST00000383836 A4D1N5 150 aa9.85□□□□□ -0.83
SRGAP3-202ENST00000383836 H0YGX0 51 aa9.85□□□□□ -0.83
SRGAP3-202ENST00000383836 CRYGBP07316 175 aa9.85□□□□□ -0.83
SRGAP3-202ENST00000383836 RNASE13Q5GAN3 156 aaKnown RBP9.85□□□□□ -0.83
SRGAP3-202ENST00000383836 IGHV1-69DA0A0B4J2H0 117 aa9.85□□□□□ -0.83
SRGAP3-202ENST00000383836 LINC00173Q6ZV60 143 aa9.85□□□□□ -0.83
SRGAP3-202ENST00000383836 SLC25A29Q8N8R3 303 aa9.85□□□□□ -0.83
SRGAP3-202ENST00000383836 Q8NFD4 153 aa9.85□□□□□ -0.83
SRGAP3-202ENST00000383836 TRBV10-2A0A0K0K1G8 114 aa9.84□□□□□ -0.83
SRGAP3-202ENST00000383836 CSRP2Q16527 193 aa9.84□□□□□ -0.83
SRGAP3-202ENST00000383836 IGHV3-38A0A0C4DH36 116 aa9.84□□□□□ -0.83
SRGAP3-202ENST00000383836 H3BUX3 64 aa9.84□□□□□ -0.83
SRGAP3-202ENST00000383836 FAM110DQ8TAY7 271 aaPredicted RBP9.84□□□□□ -0.83
SRGAP3-202ENST00000383836 LGALS9O00182 355 aa9.84□□□□□ -0.83
SRGAP3-202ENST00000383836 FUSP35637 526 aaKnown RBP eCLIP9.84□□□□□ -0.83
SRGAP3-202ENST00000383836 ZNRF2Q8NHG8 242 aa9.84□□□□□ -0.83
SRGAP3-202ENST00000383836 RBAKDNA6NC62 111 aa9.84□□□□□ -0.83
SRGAP3-202ENST00000383836 OVOL3O00110 214 aa9.84□□□□□ -0.83
SRGAP3-202ENST00000383836 MUSTN1Q8IVN3 82 aa9.84□□□□□ -0.83
SRGAP3-202ENST00000383836 ZNRD1Q9P1U0 126 aa9.84□□□□□ -0.83
SRGAP3-202ENST00000383836 C22orf46C9J442 243 aa9.84□□□□□ -0.83
SRGAP3-202ENST00000383836 DEFB130BP0DP73 79 aa9.84□□□□□ -0.83
SRGAP3-202ENST00000383836 DEFB130AP0DP74 79 aa9.84□□□□□ -0.83
SRGAP3-202ENST00000383836 PRR20EP86478 221 aa9.84□□□□□ -0.83
SRGAP3-202ENST00000383836 PRR20CP86479 221 aa9.84□□□□□ -0.83
SRGAP3-202ENST00000383836 PRR20DP86480 221 aa9.84□□□□□ -0.83
SRGAP3-202ENST00000383836 PRR20BP86481 221 aa9.84□□□□□ -0.83
SRGAP3-202ENST00000383836 PRR20AP86496 221 aa9.84□□□□□ -0.83
SRGAP3-202ENST00000383836 WT1-ASQ06250 92 aa9.84□□□□□ -0.83
SRGAP3-202ENST00000383836 CFHR1Q03591 330 aa9.83□□□□□ -0.84
SRGAP3-202ENST00000383836 ABCA12Q86UK0 2595 aa9.83□□□□□ -0.84
SRGAP3-202ENST00000383836 NDUFS5O43920 106 aa9.83□□□□□ -0.84
SRGAP3-202ENST00000383836 MP68P56378 58 aa9.83□□□□□ -0.84
SRGAP3-202ENST00000383836 DYNAPQ8N1N2 210 aa9.83□□□□□ -0.84
SRGAP3-202ENST00000383836 USP9XQ93008 2570 aaPredicted RBP9.83□□□□□ -0.84
SRGAP3-202ENST00000383836 H3BT86 120 aa9.83□□□□□ -0.84
SRGAP3-202ENST00000383836 LYPD2Q6UXB3 125 aa9.83□□□□□ -0.84
SRGAP3-202ENST00000383836 C11orf44Q8N8P7 122 aa9.83□□□□□ -0.84
SRGAP3-202ENST00000383836 UQCRQO14949 82 aa9.82□□□□□ -0.84
SRGAP3-202ENST00000383836 ZFP2Q6ZN57 461 aa9.82□□□□□ -0.84
SRGAP3-202ENST00000383836 DEFB131AP59861 70 aa9.82□□□□□ -0.84
SRGAP3-202ENST00000383836 V9GYY9 64 aa9.82□□□□□ -0.84
SRGAP3-202ENST00000383836 SAA4P35542 130 aa9.82□□□□□ -0.84
SRGAP3-202ENST00000383836 MRPL55Q7Z7F7 128 aaKnown RBP9.82□□□□□ -0.84
SRGAP3-202ENST00000383836 KLHL30-AS1Q8NEE0 82 aa9.82□□□□□ -0.84
SRGAP3-202ENST00000383836 ATP6V0E1O15342 81 aa9.82□□□□□ -0.84
SRGAP3-202ENST00000383836 Q71RC1 249 aaPredicted RBP9.82□□□□□ -0.84
SRGAP3-202ENST00000383836 B3GALT5-AS1P59052 145 aa9.81□□□□□ -0.84
SRGAP3-202ENST00000383836 C17orf58Q2M2W7 97 aa9.81□□□□□ -0.84
SRGAP3-202ENST00000383836 TRAV12-2A0A075B6T6 113 aa9.81□□□□□ -0.84
SRGAP3-202ENST00000383836 EPOPA6NHQ4 379 aa9.81□□□□□ -0.84
SRGAP3-202ENST00000383836 IGF2BP2-AS1Q96M15 143 aa9.81□□□□□ -0.84
SRGAP3-202ENST00000383836 RMI2Q96E14 147 aa9.8□□□□□ -0.84
SRGAP3-202ENST00000383836 CHKB-CPT1BH3BT56 60 aa9.8□□□□□ -0.84
SRGAP3-202ENST00000383836 CFHR3Q02985 330 aa9.8□□□□□ -0.84
SRGAP3-202ENST00000383836 CLPSL1A2RUU4 121 aa9.8□□□□□ -0.84
SRGAP3-202ENST00000383836 NDUFA4O00483 81 aa9.8□□□□□ -0.84
SRGAP3-202ENST00000383836 MRPL53Q96EL3 112 aaKnown RBP9.8□□□□□ -0.84
SRGAP3-202ENST00000383836 DKK4Q9UBT3 224 aa9.8□□□□□ -0.84
SRGAP3-202ENST00000383836 ZFP36L1Q07352 338 aaKnown RBP9.8□□□□□ -0.84
SRGAP3-202ENST00000383836 C15orf65H3BRN8 121 aa9.8□□□□□ -0.84
SRGAP3-202ENST00000383836 JMJD7-PLA2G4BH0Y9G9 81 aa9.79□□□□□ -0.84
SRGAP3-202ENST00000383836 LINC00643Q86TS7 51 aa9.79□□□□□ -0.84
SRGAP3-202ENST00000383836 VWCEQ96DN2 955 aa9.79□□□□□ -0.84
SRGAP3-202ENST00000383836 XCL2Q9UBD3 114 aa9.79□□□□□ -0.84
SRGAP3-202ENST00000383836 MT-ATP8P03928 68 aa9.79□□□□□ -0.84
SRGAP3-202ENST00000383836 GATA4P43694 442 aa9.79□□□□□ -0.84
SRGAP3-202ENST00000383836 SPATA12Q7Z6I5 190 aa9.79□□□□□ -0.84
SRGAP3-202ENST00000383836 BRD3OSQ6XYD6 125 aa9.79□□□□□ -0.84
SRGAP3-202ENST00000383836 E9PLD3 99 aa9.79□□□□□ -0.84
SRGAP3-202ENST00000383836 TMEM61Q8N0U2 210 aa9.79□□□□□ -0.84
SRGAP3-202ENST00000383836 RNF166Q96A37 237 aaPredicted RBP9.79□□□□□ -0.84
SRGAP3-202ENST00000383836 PRB2P02812 416 aaPredicted RBP9.78□□□□□ -0.84
SRGAP3-202ENST00000383836 COX7B2Q8TF08 81 aa9.78□□□□□ -0.84
SRGAP3-202ENST00000383836 BAALCQ8WXS3 180 aa9.78□□□□□ -0.84
SRGAP3-202ENST00000383836 SND1-IT1Q9HBX3 110 aa9.78□□□□□ -0.84
SRGAP3-202ENST00000383836 LENEPQ9Y5L5 61 aa9.78□□□□□ -0.84
SRGAP3-202ENST00000383836 RPL39LQ96EH5 51 aaKnown RBP9.78□□□□□ -0.84
SRGAP3-202ENST00000383836 VSIG2Q96IQ7 327 aa9.78□□□□□ -0.84
SRGAP3-202ENST00000383836 USP9YO00507 2555 aaPredicted RBP9.78□□□□□ -0.84
SRGAP3-202ENST00000383836 DAD1P61803 113 aa9.78□□□□□ -0.84
SRGAP3-202ENST00000383836 LINC00311Q8N616 119 aa9.78□□□□□ -0.84
SRGAP3-202ENST00000383836 PIFOQ8TCI5 191 aa9.78□□□□□ -0.84
SRGAP3-202ENST00000383836 LY6DQ14210 128 aa9.77□□□□□ -0.84
SRGAP3-202ENST00000383836 C4orf48Q5BLP8 95 aa9.77□□□□□ -0.85
SRGAP3-202ENST00000383836 TOMM6Q96B49 74 aa9.77□□□□□ -0.85
SRGAP3-202ENST00000383836 APOC4P55056 127 aa9.77□□□□□ -0.85
SRGAP3-202ENST00000383836 GATA1P15976 413 aaPredicted RBP9.77□□□□□ -0.85
SRGAP3-202ENST00000383836 C3orf22Q8N5N4 141 aa9.77□□□□□ -0.85
SRGAP3-202ENST00000383836 DEFB105AQ8NG35 78 aa9.77□□□□□ -0.85
SRGAP3-202ENST00000383836 Q8TCH9 128 aa9.77□□□□□ -0.85
SRGAP3-202ENST00000383836 CLEC2BQ92478 149 aa9.77□□□□□ -0.85
SRGAP3-202ENST00000383836 OPRPNQ99935 248 aaPredicted RBP9.77□□□□□ -0.85
SRGAP3-202ENST00000383836 SPTBN4Q9H254 2564 aa9.77□□□□□ -0.85
SRGAP3-202ENST00000383836 FOXE3Q13461 319 aa9.77□□□□□ -0.85
SRGAP3-202ENST00000383836 C17orf77Q96MU5 243 aa9.77□□□□□ -0.85
SRGAP3-202ENST00000383836 PLA2G2EQ9NZK7 142 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms