RNA–Protein interactions for RNA: ENST00000381150.5

SDC1-202, Transcript of syndecan 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SDC1, Length 3,291 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-202ENST00000381150 PSMG4Q5JS54 123 aa10.62□□□□□ -0.71
SDC1-202ENST00000381150 C2orf66Q6UXQ4 117 aa10.62□□□□□ -0.71
SDC1-202ENST00000381150 ANKRD29Q8N6D5 301 aa10.62□□□□□ -0.71
SDC1-202ENST00000381150 PPDPFLQ8WWR9 84 aa10.62□□□□□ -0.71
SDC1-202ENST00000381150 TTC32Q5I0X7 151 aa10.62□□□□□ -0.71
SDC1-202ENST00000381150 CLEC19AQ6UXS0 136 aa10.62□□□□□ -0.71
SDC1-202ENST00000381150 FANCD2OSQ96PS1 177 aa10.62□□□□□ -0.71
SDC1-202ENST00000381150 PHLDA3Q9Y5J5 127 aa10.62□□□□□ -0.71
SDC1-202ENST00000381150 IGF1P05019 195 aa10.61□□□□□ -0.71
SDC1-202ENST00000381150 TRPT1Q86TN4 253 aaKnown RBP10.61□□□□□ -0.71
SDC1-202ENST00000381150 NCOR2Q9Y618 2525 aa10.61□□□□□ -0.71
SDC1-202ENST00000381150 A0A1W2PPR1 153 aa10.61□□□□□ -0.71
SDC1-202ENST00000381150 SNCGO76070 127 aa10.61□□□□□ -0.71
SDC1-202ENST00000381150 CARD19Q96LW7 228 aa10.61□□□□□ -0.71
SDC1-202ENST00000381150 SMIM2Q9BVW6 85 aa10.61□□□□□ -0.71
SDC1-202ENST00000381150 SPTBN4Q9H254 2564 aa10.61□□□□□ -0.71
SDC1-202ENST00000381150 ODF3BA8MYP8 253 aa10.6□□□□□ -0.71
SDC1-202ENST00000381150 LINC00527Q9UJ94 153 aa10.6□□□□□ -0.71
SDC1-202ENST00000381150 C15orf32Q32M92 178 aa10.6□□□□□ -0.71
SDC1-202ENST00000381150 TEN1Q86WV5 123 aa10.6□□□□□ -0.71
SDC1-202ENST00000381150 TRAV2A0A0B4J234 112 aa10.6□□□□□ -0.71
SDC1-202ENST00000381150 ZNF688P0C7X2 276 aa10.6□□□□□ -0.71
SDC1-202ENST00000381150 SUMO2P61956 95 aaKnown RBP10.6□□□□□ -0.71
SDC1-202ENST00000381150 GAGE2BQ13066 116 aa10.6□□□□□ -0.71
SDC1-202ENST00000381150 GAGE2EQ4V326 116 aa10.6□□□□□ -0.71
SDC1-202ENST00000381150 NRACQ8N912 160 aa10.6□□□□□ -0.71
SDC1-202ENST00000381150 PIFOQ8TCI5 191 aa10.6□□□□□ -0.71
SDC1-202ENST00000381150 C16orf92Q96LL3 132 aa10.6□□□□□ -0.71
SDC1-202ENST00000381150 DPM3Q9P2X0 92 aa10.6□□□□□ -0.71
SDC1-202ENST00000381150 GAGE2DQ9UEU5 116 aa10.6□□□□□ -0.71
SDC1-202ENST00000381150 IGHG4P01861 327 aa10.59□□□□□ -0.71
SDC1-202ENST00000381150 CTSGP08311 255 aa10.59□□□□□ -0.71
SDC1-202ENST00000381150 SMIM20Q8N5G0 67 aa10.59□□□□□ -0.71
SDC1-202ENST00000381150 NPBQ8NG41 125 aa10.59□□□□□ -0.71
SDC1-202ENST00000381150 DUSP14O95147 198 aaKnown RBP10.59□□□□□ -0.71
SDC1-202ENST00000381150 C5orf64Q2M2E5 130 aa10.59□□□□□ -0.71
SDC1-202ENST00000381150 Q6ZS46 218 aa10.59□□□□□ -0.71
SDC1-202ENST00000381150 IGLV2-18A0A075B6J9 118 aa10.59□□□□□ -0.71
SDC1-202ENST00000381150 M0R1W7 72 aa10.59□□□□□ -0.71
SDC1-202ENST00000381150 LYRM7Q5U5X0 104 aa10.59□□□□□ -0.71
SDC1-202ENST00000381150 ERG28Q9UKR5 140 aa10.59□□□□□ -0.71
SDC1-202ENST00000381150 CHD8Q9HCK8 2581 aa10.58□□□□□ -0.71
SDC1-202ENST00000381150 PRSS2P07478 247 aa10.58□□□□□ -0.72
SDC1-202ENST00000381150 GAGE5Q13069 117 aa10.58□□□□□ -0.72
SDC1-202ENST00000381150 GAGE6Q13070 117 aa10.58□□□□□ -0.72
SDC1-202ENST00000381150 FAM74A4Q5TZK3 123 aa10.58□□□□□ -0.72
SDC1-202ENST00000381150 NACAE9PAV3 2078 aa10.58□□□□□ -0.72
SDC1-202ENST00000381150 CRIP2P52943 208 aaPredicted RBP10.58□□□□□ -0.72
SDC1-202ENST00000381150 ZNF575Q86XF7 245 aa10.58□□□□□ -0.72
SDC1-202ENST00000381150 BAALCQ8WXS3 180 aa10.58□□□□□ -0.72
SDC1-202ENST00000381150 TIMD4Q96H15 378 aa10.58□□□□□ -0.72
SDC1-202ENST00000381150 NPC2P61916 151 aa10.57□□□□□ -0.72
SDC1-202ENST00000381150 ORMDL2Q53FV1 153 aa10.57□□□□□ -0.72
SDC1-202ENST00000381150 CENPEQ02224 2701 aa10.57□□□□□ -0.72
SDC1-202ENST00000381150 RPL39P62891 51 aaKnown RBP10.57□□□□□ -0.72
SDC1-202ENST00000381150 NTN5Q8WTR8 489 aaPredicted RBP10.57□□□□□ -0.72
SDC1-202ENST00000381150 ITPR1Q14643 2758 aa10.57□□□□□ -0.72
SDC1-202ENST00000381150 SLC25A20O43772 301 aa10.57□□□□□ -0.72
SDC1-202ENST00000381150 HERVK_113P61574 105 aa10.57□□□□□ -0.72
SDC1-202ENST00000381150 LINC01559Q495D7 138 aa10.57□□□□□ -0.72
SDC1-202ENST00000381150 RASL10AQ92737 203 aa10.57□□□□□ -0.72
SDC1-202ENST00000381150 ZNF256Q9Y2P7 627 aaPredicted RBP10.57□□□□□ -0.72
SDC1-202ENST00000381150 IGLV11-55A0A075B6I3 123 aa10.56□□□□□ -0.72
SDC1-202ENST00000381150 C11orf86A6NJI1 115 aa10.56□□□□□ -0.72
SDC1-202ENST00000381150 NDUFA11Q86Y39 141 aa10.56□□□□□ -0.72
SDC1-202ENST00000381150 F8W735 103 aaPredicted RBP10.56□□□□□ -0.72
SDC1-202ENST00000381150 ZFP36P26651 326 aaKnown RBP10.56□□□□□ -0.72
SDC1-202ENST00000381150 TP53TG1Q9Y2A0 90 aa10.56□□□□□ -0.72
SDC1-202ENST00000381150 HIVEP3Q5T1R4 2406 aa10.56□□□□□ -0.72
SDC1-202ENST00000381150 TRAV4A0A0B4J268 109 aa10.55□□□□□ -0.72
SDC1-202ENST00000381150 ADARB2-AS1A8MUL3 147 aa10.55□□□□□ -0.72
SDC1-202ENST00000381150 RNASE4P34096 147 aaKnown RBP10.55□□□□□ -0.72
SDC1-202ENST00000381150 A0A087WWL8 130 aa10.55□□□□□ -0.72
SDC1-202ENST00000381150 G3V318 75 aa10.55□□□□□ -0.72
SDC1-202ENST00000381150 LGALS3P17931 250 aaKnown RBP10.55□□□□□ -0.72
SDC1-202ENST00000381150 F6UB75 175 aa10.54□□□□□ -0.72
SDC1-202ENST00000381150 CCDC179H3BU77 68 aa10.54□□□□□ -0.72
SDC1-202ENST00000381150 SRD5A1P18405 259 aa10.54□□□□□ -0.72
SDC1-202ENST00000381150 Q8N6K4 173 aa10.54□□□□□ -0.72
SDC1-202ENST00000381150 CSMD2Q7Z408 3487 aa10.54□□□□□ -0.72
SDC1-202ENST00000381150 IGHV7-4-1A0A0J9YVY3 117 aa10.54□□□□□ -0.72
SDC1-202ENST00000381150 GNRH2O43555 120 aa10.54□□□□□ -0.72
SDC1-202ENST00000381150 CRLF1O75462 422 aa10.54□□□□□ -0.72
SDC1-202ENST00000381150 HERV-K104P63124 156 aa10.54□□□□□ -0.72
SDC1-202ENST00000381150 LY6DQ14210 128 aa10.54□□□□□ -0.72
SDC1-202ENST00000381150 NEXN-AS1Q8NBZ9 246 aa10.54□□□□□ -0.72
SDC1-202ENST00000381150 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.53□□□□□ -0.72
SDC1-202ENST00000381150 AJUBAQ96IF1 538 aa10.53□□□□□ -0.72
SDC1-202ENST00000381150 CFC1BP0CG36 223 aa10.53□□□□□ -0.72
SDC1-202ENST00000381150 CFC1P0CG37 223 aa10.53□□□□□ -0.72
SDC1-202ENST00000381150 PRR9Q5T870 116 aa10.53□□□□□ -0.72
SDC1-202ENST00000381150 OPRPNQ99935 248 aaPredicted RBP10.53□□□□□ -0.72
SDC1-202ENST00000381150 PRO1854Q9UHT4 67 aa10.53□□□□□ -0.72
SDC1-202ENST00000381150 SONP18583 2426 aaKnown RBP10.53□□□□□ -0.72
SDC1-202ENST00000381150 EBI3Q14213 229 aa10.53□□□□□ -0.72
SDC1-202ENST00000381150 VMO1Q7Z5L0 202 aa10.53□□□□□ -0.72
SDC1-202ENST00000381150 JPT2Q9H910 190 aa10.53□□□□□ -0.72
SDC1-202ENST00000381150 A4D1N5 150 aa10.52□□□□□ -0.72
SDC1-202ENST00000381150 CNFNQ9BYD5 112 aa10.52□□□□□ -0.72
SDC1-202ENST00000381150 BUB3O43684 328 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 84.9 ms