RNA–Protein interactions for RNA: ENST00000380871.4

NKX3-1-201, Transcript of NK3 homeobox 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NKX3-1, Length 3,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-201ENST00000380871 CCDC168Q8NDH2 2452 aa12.32□□□□□ -0.44
NKX3-1-201ENST00000380871 C14orf178Q8N769 122 aaPredicted RBP12.32□□□□□ -0.44
NKX3-1-201ENST00000380871 AMTNQ6UX39 209 aa12.32□□□□□ -0.44
NKX3-1-201ENST00000380871 GPHB5Q86YW7 130 aa12.32□□□□□ -0.44
NKX3-1-201ENST00000380871 TM2D2Q9BX73 214 aa12.32□□□□□ -0.44
NKX3-1-201ENST00000380871 SMPXQ9UHP9 88 aa12.32□□□□□ -0.44
NKX3-1-201ENST00000380871 SMIM2Q9BVW6 85 aa12.31□□□□□ -0.44
NKX3-1-201ENST00000380871 SRSF1Q07955 248 aaKnown RBP eCLIP12.31□□□□□ -0.44
NKX3-1-201ENST00000380871 TRBV7-1A0A0A6YYK4 115 aa12.31□□□□□ -0.44
NKX3-1-201ENST00000380871 TGFAP01135 160 aa12.31□□□□□ -0.44
NKX3-1-201ENST00000380871 C10orf99Q6UWK7 81 aa12.31□□□□□ -0.44
NKX3-1-201ENST00000380871 RASL10AQ92737 203 aa12.31□□□□□ -0.44
NKX3-1-201ENST00000380871 U3KQE9 123 aa12.31□□□□□ -0.44
NKX3-1-201ENST00000380871 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.3□□□□□ -0.44
NKX3-1-201ENST00000380871 BBC3Q96PG8 261 aaPredicted RBP12.3□□□□□ -0.44
NKX3-1-201ENST00000380871 DUX5Q96PT3 197 aa12.3□□□□□ -0.44
NKX3-1-201ENST00000380871 EDN2P20800 178 aa12.3□□□□□ -0.44
NKX3-1-201ENST00000380871 ZFAND2AQ8N6M9 145 aa12.3□□□□□ -0.44
NKX3-1-201ENST00000380871 HIST1H4GQ99525 98 aa12.3□□□□□ -0.44
NKX3-1-201ENST00000380871 IGLL5B9A064 214 aa12.29□□□□□ -0.44
NKX3-1-201ENST00000380871 WFDC2Q14508 124 aa12.29□□□□□ -0.44
NKX3-1-201ENST00000380871 H3BMG7 143 aa12.29□□□□□ -0.44
NKX3-1-201ENST00000380871 MGPP08493 103 aa12.29□□□□□ -0.44
NKX3-1-201ENST00000380871 IGHV4-4A0A075B6R2 117 aa12.29□□□□□ -0.44
NKX3-1-201ENST00000380871 IGHV4-59P01825 116 aa12.29□□□□□ -0.44
NKX3-1-201ENST00000380871 SCGB3A1Q96QR1 104 aa12.29□□□□□ -0.44
NKX3-1-201ENST00000380871 PRSS47A8MTI9 375 aa12.28□□□□□ -0.44
NKX3-1-201ENST00000380871 C12orf74Q32Q52 190 aa12.28□□□□□ -0.44
NKX3-1-201ENST00000380871 GNRH2O43555 120 aa12.28□□□□□ -0.44
NKX3-1-201ENST00000380871 S100A4P26447 101 aaKnown RBP12.28□□□□□ -0.44
NKX3-1-201ENST00000380871 SUMO2P61956 95 aaKnown RBP12.28□□□□□ -0.44
NKX3-1-201ENST00000380871 ZNF479Q96JC4 524 aa12.28□□□□□ -0.44
NKX3-1-201ENST00000380871 E9PLD3 99 aa12.28□□□□□ -0.44
NKX3-1-201ENST00000380871 F8VRH5 84 aa12.28□□□□□ -0.44
NKX3-1-201ENST00000380871 KLK9Q2XQG4 91 aa12.28□□□□□ -0.44
NKX3-1-201ENST00000380871 ANXA2RQ3ZCQ2 193 aa12.28□□□□□ -0.44
NKX3-1-201ENST00000380871 MRPL53Q96EL3 112 aaKnown RBP12.28□□□□□ -0.44
NKX3-1-201ENST00000380871 KLK9Q9UKQ9 250 aa12.28□□□□□ -0.44
NKX3-1-201ENST00000380871 RNF223E7ERA6 249 aa12.27□□□□□ -0.45
NKX3-1-201ENST00000380871 PLNP26678 52 aa12.27□□□□□ -0.45
NKX3-1-201ENST00000380871 RNASE4P34096 147 aaKnown RBP12.27□□□□□ -0.45
NKX3-1-201ENST00000380871 CHTOPQ9Y3Y2 248 aaKnown RBP12.27□□□□□ -0.45
NKX3-1-201ENST00000380871 CYSLTR1Q9Y271 337 aa12.27□□□□□ -0.45
NKX3-1-201ENST00000380871 B4DSR2 109 aa12.26□□□□□ -0.45
NKX3-1-201ENST00000380871 TMEM238C9JI98 176 aa12.26□□□□□ -0.45
NKX3-1-201ENST00000380871 H7C1H1 209 aa12.26□□□□□ -0.45
NKX3-1-201ENST00000380871 DEFB112Q30KQ8 113 aa12.26□□□□□ -0.45
NKX3-1-201ENST00000380871 SH2D6Q7Z4S9 175 aa12.26□□□□□ -0.45
NKX3-1-201ENST00000380871 MUC4Q99102 2169 aa12.26□□□□□ -0.45
NKX3-1-201ENST00000380871 EMP1P54849 157 aa12.26□□□□□ -0.45
NKX3-1-201ENST00000380871 MRAP2Q96G30 205 aa12.26□□□□□ -0.45
NKX3-1-201ENST00000380871 PHLDA3Q9Y5J5 127 aa12.26□□□□□ -0.45
NKX3-1-201ENST00000380871 MYO9AB2RTY4 2548 aa12.25□□□□□ -0.45
NKX3-1-201ENST00000380871 PSMG4Q5JS54 123 aa12.25□□□□□ -0.45
NKX3-1-201ENST00000380871 C9orf139Q6ZV77 190 aa12.25□□□□□ -0.45
NKX3-1-201ENST00000380871 TRBV7-3A0A075B6L6 115 aa12.25□□□□□ -0.45
NKX3-1-201ENST00000380871 KRTAP10-9P60411 292 aa12.25□□□□□ -0.45
NKX3-1-201ENST00000380871 HIST2H2BDQ6DRA6 164 aa12.25□□□□□ -0.45
NKX3-1-201ENST00000380871 FOXI2Q6ZQN5 318 aa12.25□□□□□ -0.45
NKX3-1-201ENST00000380871 NEXN-AS1Q8NBZ9 246 aa12.25□□□□□ -0.45
NKX3-1-201ENST00000380871 TOMM6Q96B49 74 aa12.25□□□□□ -0.45
NKX3-1-201ENST00000380871 SETD2Q9BYW2 2564 aaPredicted RBP12.24□□□□□ -0.45
NKX3-1-201ENST00000380871 A6NDX4 124 aa12.24□□□□□ -0.45
NKX3-1-201ENST00000380871 OR11H12B2RN74 326 aa12.24□□□□□ -0.45
NKX3-1-201ENST00000380871 HLA-DRB4P13762 266 aa12.24□□□□□ -0.45
NKX3-1-201ENST00000380871 SFTA2Q6UW10 78 aa12.24□□□□□ -0.45
NKX3-1-201ENST00000380871 C2orf66Q6UXQ4 117 aa12.24□□□□□ -0.45
NKX3-1-201ENST00000380871 OR11H1Q8NG94 326 aa12.24□□□□□ -0.45
NKX3-1-201ENST00000380871 OR11H2Q8NH07 326 aa12.24□□□□□ -0.45
NKX3-1-201ENST00000380871 BAALCQ8WXS3 180 aa12.24□□□□□ -0.45
NKX3-1-201ENST00000380871 HLA-DRB4X5D2U9 266 aa12.24□□□□□ -0.45
NKX3-1-201ENST00000380871 NDUFS8O00217 210 aa12.24□□□□□ -0.45
NKX3-1-201ENST00000380871 IGKV3-20P01619 116 aa12.24□□□□□ -0.45
NKX3-1-201ENST00000380871 OR10J6PQ8NGY7 276 aa12.24□□□□□ -0.45
NKX3-1-201ENST00000380871 MYMXA0A1B0GTQ4 84 aa12.24□□□□□ -0.45
NKX3-1-201ENST00000380871 COX6B1P14854 86 aa12.24□□□□□ -0.45
NKX3-1-201ENST00000380871 SPOCK3Q9BQ16 436 aa12.24□□□□□ -0.45
NKX3-1-201ENST00000380871 JPT2Q9H910 190 aa12.24□□□□□ -0.45
NKX3-1-201ENST00000380871 FAM223BA6NKX1 122 aa12.23□□□□□ -0.45
NKX3-1-201ENST00000380871 SOCS3O14543 225 aa12.23□□□□□ -0.45
NKX3-1-201ENST00000380871 ASIPP42127 132 aa12.23□□□□□ -0.45
NKX3-1-201ENST00000380871 ETDBQ3ZM63 59 aa12.23□□□□□ -0.45
NKX3-1-201ENST00000380871 FAM223AQ8IWN6 122 aa12.23□□□□□ -0.45
NKX3-1-201ENST00000380871 PRRC2AP48634 2157 aaKnown RBP12.23□□□□□ -0.45
NKX3-1-201ENST00000380871 LGALS1P09382 135 aaKnown RBP12.23□□□□□ -0.45
NKX3-1-201ENST00000380871 C19orf54Q5BKX5 351 aa12.23□□□□□ -0.45
NKX3-1-201ENST00000380871 RHPN1-AS1Q9BWJ2 59 aa12.23□□□□□ -0.45
NKX3-1-201ENST00000380871 GTSF1LQ9H1H1 148 aa12.23□□□□□ -0.45
NKX3-1-201ENST00000380871 DPH3P1Q9H4G8 78 aa12.23□□□□□ -0.45
NKX3-1-201ENST00000380871 TRAV21A0A0B4J279 112 aa12.22□□□□□ -0.45
NKX3-1-201ENST00000380871 PRSS29PA6NIE9 313 aa12.22□□□□□ -0.45
NKX3-1-201ENST00000380871 IGHG2P01859 326 aa12.22□□□□□ -0.45
NKX3-1-201ENST00000380871 RNASE3P12724 160 aaKnown RBP12.22□□□□□ -0.45
NKX3-1-201ENST00000380871 PLEKHB2Q96CS7 222 aa12.22□□□□□ -0.45
NKX3-1-201ENST00000380871 PRADC1Q9BSG0 188 aa12.22□□□□□ -0.45
NKX3-1-201ENST00000380871 SPANXB1Q9NS25 103 aaPredicted RBP12.22□□□□□ -0.45
NKX3-1-201ENST00000380871 TRAV12-1A0A0B4J245 112 aa12.22□□□□□ -0.45
NKX3-1-201ENST00000380871 ORMDL2Q53FV1 153 aa12.22□□□□□ -0.45
NKX3-1-201ENST00000380871 KLHL30-AS1Q8NEE0 82 aa12.22□□□□□ -0.45
NKX3-1-201ENST00000380871 DUSP14O95147 198 aaKnown RBP12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms