RNA–Protein interactions for RNA: ENST00000380742.8

SMN2-202, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 1,388 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-202ENST00000380742 GAGE12GP0CL81 117 aa13.35□□□□□ -0.27
SMN2-202ENST00000380742 GAGE12IP0CL82 117 aa13.35□□□□□ -0.27
SMN2-202ENST00000380742 DEFB130BP0DP73 79 aa13.35□□□□□ -0.27
SMN2-202ENST00000380742 DEFB130AP0DP74 79 aa13.35□□□□□ -0.27
SMN2-202ENST00000380742 LGALS9BQ3B8N2 356 aa13.35□□□□□ -0.27
SMN2-202ENST00000380742 OR10G8Q8NGN5 311 aa13.35□□□□□ -0.27
SMN2-202ENST00000380742 SSBP4Q9BWG4 385 aaPredicted RBP13.35□□□□□ -0.27
SMN2-202ENST00000380742 V9GYV3 84 aa13.35□□□□□ -0.27
SMN2-202ENST00000380742 NACAE9PAV3 2078 aa13.34□□□□□ -0.27
SMN2-202ENST00000380742 XKRY2A2RUG3 117 aa13.34□□□□□ -0.27
SMN2-202ENST00000380742 MED14OSP0DP75 135 aa13.34□□□□□ -0.27
SMN2-202ENST00000380742 DAD1P61803 113 aa13.34□□□□□ -0.27
SMN2-202ENST00000380742 NDUFA5Q16718 116 aa13.34□□□□□ -0.27
SMN2-202ENST00000380742 CT83Q5H943 113 aa13.34□□□□□ -0.27
SMN2-202ENST00000380742 RASL10AQ92737 203 aa13.34□□□□□ -0.27
SMN2-202ENST00000380742 CARHSP1Q9Y2V2 147 aaKnown RBP13.34□□□□□ -0.27
SMN2-202ENST00000380742 SNAI2O43623 268 aa13.33□□□□□ -0.27
SMN2-202ENST00000380742 OR5AL1P0C617 328 aa13.33□□□□□ -0.27
SMN2-202ENST00000380742 Q6ZTC4 211 aa13.33□□□□□ -0.27
SMN2-202ENST00000380742 GTSF1Q8WW33 167 aa13.33□□□□□ -0.27
SMN2-202ENST00000380742 A8MWL6 223 aa13.32□□□□□ -0.28
SMN2-202ENST00000380742 ZNF876PQ49A33 203 aa13.32□□□□□ -0.28
SMN2-202ENST00000380742 FER1L6-AS1Q8NA97 138 aa13.32□□□□□ -0.28
SMN2-202ENST00000380742 PTH2Q96A98 100 aa13.32□□□□□ -0.28
SMN2-202ENST00000380742 WWC2-AS2Q96NR7 200 aa13.32□□□□□ -0.28
SMN2-202ENST00000380742 PHLDA3Q9Y5J5 127 aa13.32□□□□□ -0.28
SMN2-202ENST00000380742 MUC21A0A0G2JKD1 596 aa13.32□□□□□ -0.28
SMN2-202ENST00000380742 MUC21A0A140T8X8 626 aa13.32□□□□□ -0.28
SMN2-202ENST00000380742 RNF212Q495C1 297 aa13.32□□□□□ -0.28
SMN2-202ENST00000380742 DMRTA1Q5VZB9 504 aa13.32□□□□□ -0.28
SMN2-202ENST00000380742 OR10AG1Q8NH19 301 aa13.32□□□□□ -0.28
SMN2-202ENST00000380742 TPPP3Q9BW30 176 aa13.32□□□□□ -0.28
SMN2-202ENST00000380742 LYZL1Q6UWQ5 148 aa13.31□□□□□ -0.28
SMN2-202ENST00000380742 TSKUQ8WUA8 353 aa13.31□□□□□ -0.28
SMN2-202ENST00000380742 TRGV2A0A075B6R0 118 aa13.3□□□□□ -0.28
SMN2-202ENST00000380742 A0A1W2PPQ1 181 aa13.3□□□□□ -0.28
SMN2-202ENST00000380742 M0R381 172 aa13.3□□□□□ -0.28
SMN2-202ENST00000380742 POM121L12Q8N7R1 296 aa13.3□□□□□ -0.28
SMN2-202ENST00000380742 C18orf15Q96N68 181 aa13.3□□□□□ -0.28
SMN2-202ENST00000380742 DYNC2H1Q8NCM8 4307 aaKnown RBP13.29□□□□□ -0.28
SMN2-202ENST00000380742 NXPH4O95158 308 aa13.29□□□□□ -0.28
SMN2-202ENST00000380742 CTRLP40313 264 aa13.29□□□□□ -0.28
SMN2-202ENST00000380742 FOXA3P55318 350 aaPredicted RBP13.29□□□□□ -0.28
SMN2-202ENST00000380742 SSTP61278 116 aa13.29□□□□□ -0.28
SMN2-202ENST00000380742 ZFP82Q8N141 532 aa13.29□□□□□ -0.28
SMN2-202ENST00000380742 GFRA4Q9GZZ7 299 aa13.29□□□□□ -0.28
SMN2-202ENST00000380742 CSMD3Q7Z407 3707 aa13.29□□□□□ -0.28
SMN2-202ENST00000380742 F2Z2F3 143 aa13.28□□□□□ -0.28
SMN2-202ENST00000380742 PPP1R2P9O14990 202 aa13.28□□□□□ -0.28
SMN2-202ENST00000380742 APOC3P02656 99 aa13.28□□□□□ -0.28
SMN2-202ENST00000380742 MT-ND4LP03901 98 aa13.28□□□□□ -0.28
SMN2-202ENST00000380742 PIK3CD-AS1Q5SR53 167 aa13.28□□□□□ -0.28
SMN2-202ENST00000380742 SYT8Q8NBV8 401 aa13.28□□□□□ -0.28
SMN2-202ENST00000380742 ANAPC16Q96DE5 110 aa13.28□□□□□ -0.28
SMN2-202ENST00000380742 NDUFAF3Q9BU61 184 aa13.28□□□□□ -0.28
SMN2-202ENST00000380742 JPT2Q9H910 190 aa13.28□□□□□ -0.28
SMN2-202ENST00000380742 FAM231BA6NCW3 169 aa13.27□□□□□ -0.29
SMN2-202ENST00000380742 HIGD1CA8MV81 97 aa13.27□□□□□ -0.29
SMN2-202ENST00000380742 SPANXN1Q5VSR9 72 aa13.27□□□□□ -0.29
SMN2-202ENST00000380742 CLRN3Q8NCR9 226 aa13.27□□□□□ -0.29
SMN2-202ENST00000380742 PGLYRP4Q96LB8 373 aa13.27□□□□□ -0.29
SMN2-202ENST00000380742 TRAV4A0A0B4J268 109 aa13.26□□□□□ -0.29
SMN2-202ENST00000380742 SMIM27A0A1W2PRY6 76 aa13.26□□□□□ -0.29
SMN2-202ENST00000380742 RS1O15537 224 aa13.26□□□□□ -0.29
SMN2-202ENST00000380742 IGHV3-53P01767 116 aa13.26□□□□□ -0.29
SMN2-202ENST00000380742 ATP5G1P05496 136 aa13.26□□□□□ -0.29
SMN2-202ENST00000380742 HTN3P15516 51 aa13.26□□□□□ -0.29
SMN2-202ENST00000380742 CFAP126Q5VTH2 177 aa13.26□□□□□ -0.29
SMN2-202ENST00000380742 PHLDA1Q8WV24 401 aaPredicted RBP13.26□□□□□ -0.29
SMN2-202ENST00000380742 ZNF479Q96JC4 524 aa13.26□□□□□ -0.29
SMN2-202ENST00000380742 MSRB1Q9NZV6 116 aa13.26□□□□□ -0.29
SMN2-202ENST00000380742 IGHV4-4A0A075B6R2 117 aa13.25□□□□□ -0.29
SMN2-202ENST00000380742 DEFB131BA0A096LNP1 70 aa13.25□□□□□ -0.29
SMN2-202ENST00000380742 TRAV10A0A0B4J240 114 aa13.25□□□□□ -0.29
SMN2-202ENST00000380742 HOXA5P20719 270 aa13.25□□□□□ -0.29
SMN2-202ENST00000380742 CACNG7P62955 275 aa13.25□□□□□ -0.29
SMN2-202ENST00000380742 NUP35Q8NFH5 326 aa13.25□□□□□ -0.29
SMN2-202ENST00000380742 OR4C5Q8NGB2 326 aa13.25□□□□□ -0.29
SMN2-202ENST00000380742 MUC7Q8TAX7 377 aa13.25□□□□□ -0.29
SMN2-202ENST00000380742 CNFNQ9BYD5 112 aa13.25□□□□□ -0.29
SMN2-202ENST00000380742 STARD9Q9P2P6 4700 aa13.25□□□□□ -0.29
SMN2-202ENST00000380742 C7orf77A4D0Y5 90 aa13.24□□□□□ -0.29
SMN2-202ENST00000380742 A8MWV9 139 aa13.24□□□□□ -0.29
SMN2-202ENST00000380742 NTF3P20783 257 aa13.24□□□□□ -0.29
SMN2-202ENST00000380742 WDR73Q6P4I2 378 aa13.24□□□□□ -0.29
SMN2-202ENST00000380742 SAMD10Q9BYL1 202 aa13.24□□□□□ -0.29
SMN2-202ENST00000380742 SVBPQ8N300 66 aa13.23□□□□□ -0.29
SMN2-202ENST00000380742 NAT8BQ9UHF3 227 aa13.23□□□□□ -0.29
SMN2-202ENST00000380742 F5H768 121 aa13.22□□□□□ -0.29
SMN2-202ENST00000380742 FHL2Q14192 279 aa13.22□□□□□ -0.29
SMN2-202ENST00000380742 ZFAND6Q6FIF0 208 aa13.22□□□□□ -0.29
SMN2-202ENST00000380742 CTDSP1Q9GZU7 261 aa13.22□□□□□ -0.29
SMN2-202ENST00000380742 CRYGDP07320 174 aa13.21□□□□□ -0.29
SMN2-202ENST00000380742 RHEBQ15382 184 aa13.21□□□□□ -0.29
SMN2-202ENST00000380742 TWIST1Q15672 202 aa13.21□□□□□ -0.29
SMN2-202ENST00000380742 UFSP1Q6NVU6 142 aa13.21□□□□□ -0.29
SMN2-202ENST00000380742 A0A087WWL8 130 aa13.2□□□□□ -0.3
SMN2-202ENST00000380742 IGHV3-73A0A0B4J1V6 119 aa13.2□□□□□ -0.3
SMN2-202ENST00000380742 A0A1B0GUT8 65 aa13.2□□□□□ -0.3
SMN2-202ENST00000380742 SNAPINO95295 136 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms