RNA–Protein interactions for RNA: ENST00000380494.9

COL4A3BP-203, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 2 BASIC

Gene COL4A3BP, Length 5,651 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-203ENST00000380494 CTSZQ9UBR2 303 aa13.25□□□□□ -0.29
COL4A3BP-203ENST00000380494 BUB3O43684 328 aa13.25□□□□□ -0.29
COL4A3BP-203ENST00000380494 IGLV2-23P01705 113 aa13.25□□□□□ -0.29
COL4A3BP-203ENST00000380494 CLEC2BQ92478 149 aa13.25□□□□□ -0.29
COL4A3BP-203ENST00000380494 XCL1P47992 114 aa13.25□□□□□ -0.29
COL4A3BP-203ENST00000380494 IGHV1-58A0A0C4DH39 117 aa13.24□□□□□ -0.29
COL4A3BP-203ENST00000380494 CTSGP08311 255 aa13.24□□□□□ -0.29
COL4A3BP-203ENST00000380494 MP68P56378 58 aa13.24□□□□□ -0.29
COL4A3BP-203ENST00000380494 DNAJC13O75165 2243 aa13.24□□□□□ -0.29
COL4A3BP-203ENST00000380494 P0C879 139 aa13.24□□□□□ -0.29
COL4A3BP-203ENST00000380494 MT-ATP8P03928 68 aa13.23□□□□□ -0.29
COL4A3BP-203ENST00000380494 IGLV2-8P01709 118 aa13.23□□□□□ -0.29
COL4A3BP-203ENST00000380494 LY6DQ14210 128 aa13.23□□□□□ -0.29
COL4A3BP-203ENST00000380494 CLUHP3Q96NS8 147 aa13.23□□□□□ -0.29
COL4A3BP-203ENST00000380494 PDE6GP18545 87 aa13.23□□□□□ -0.29
COL4A3BP-203ENST00000380494 ESPL1Q14674 2120 aa13.23□□□□□ -0.29
COL4A3BP-203ENST00000380494 GNLYP22749 145 aa13.23□□□□□ -0.29
COL4A3BP-203ENST00000380494 VSIG2Q96IQ7 327 aa13.23□□□□□ -0.29
COL4A3BP-203ENST00000380494 TNRC6AQ8NDV7 1962 aaKnown RBP13.23□□□□□ -0.29
COL4A3BP-203ENST00000380494 WDR81Q562E7 1941 aa13.23□□□□□ -0.29
COL4A3BP-203ENST00000380494 RPL39P62891 51 aaKnown RBP13.22□□□□□ -0.29
COL4A3BP-203ENST00000380494 IGKV1OR2-108A0A075B7D4 117 aa13.22□□□□□ -0.29
COL4A3BP-203ENST00000380494 PTH2Q96A98 100 aa13.22□□□□□ -0.29
COL4A3BP-203ENST00000380494 Q8N1Y9 231 aa13.22□□□□□ -0.29
COL4A3BP-203ENST00000380494 TMEM256-PLSCR3K7ERE1 68 aa13.22□□□□□ -0.29
COL4A3BP-203ENST00000380494 PLXND1Q9Y4D7 1925 aa13.22□□□□□ -0.29
COL4A3BP-203ENST00000380494 MIAQ16674 131 aa13.22□□□□□ -0.29
COL4A3BP-203ENST00000380494 THADAQ6YHU6 1953 aa13.21□□□□□ -0.29
COL4A3BP-203ENST00000380494 WFDC9Q8NEX5 89 aa13.21□□□□□ -0.29
COL4A3BP-203ENST00000380494 ABCA7Q8IZY2 2146 aa13.21□□□□□ -0.29
COL4A3BP-203ENST00000380494 IGHV7-81A0A0B4J1V7 117 aa13.21□□□□□ -0.3
COL4A3BP-203ENST00000380494 TEX22C9J3V5 150 aa13.21□□□□□ -0.3
COL4A3BP-203ENST00000380494 MDFICQ9P1T7 246 aa13.21□□□□□ -0.3
COL4A3BP-203ENST00000380494 FAM215AQ9Y5M1 114 aa13.21□□□□□ -0.3
COL4A3BP-203ENST00000380494 NOP10Q9NPE3 64 aaKnown RBP13.21□□□□□ -0.3
COL4A3BP-203ENST00000380494 ODF3L1Q8IXM7 274 aa13.2□□□□□ -0.3
COL4A3BP-203ENST00000380494 ZNF503Q96F45 646 aa13.2□□□□□ -0.3
COL4A3BP-203ENST00000380494 MAP1BP46821 2468 aaKnown RBP13.2□□□□□ -0.3
COL4A3BP-203ENST00000380494 NREPQ16612 68 aa13.2□□□□□ -0.3
COL4A3BP-203ENST00000380494 C16orf74Q96GX8 76 aa13.2□□□□□ -0.3
COL4A3BP-203ENST00000380494 RITA1Q96K30 269 aa13.2□□□□□ -0.3
COL4A3BP-203ENST00000380494 COL4A6Q14031 1691 aa13.2□□□□□ -0.3
COL4A3BP-203ENST00000380494 CXCL5P42830 114 aa13.19□□□□□ -0.3
COL4A3BP-203ENST00000380494 PRSS33Q8NF86 280 aa13.19□□□□□ -0.3
COL4A3BP-203ENST00000380494 HELZP42694 1942 aaKnown RBP13.19□□□□□ -0.3
COL4A3BP-203ENST00000380494 C3orf22Q8N5N4 141 aa13.19□□□□□ -0.3
COL4A3BP-203ENST00000380494 CENPVL3A0A0U1RRI6 287 aa13.19□□□□□ -0.3
COL4A3BP-203ENST00000380494 LECT2O14960 151 aa13.19□□□□□ -0.3
COL4A3BP-203ENST00000380494 HEATR5AQ86XA9 2040 aa13.18□□□□□ -0.3
COL4A3BP-203ENST00000380494 HIST2H2BCQ6DN03 193 aa13.18□□□□□ -0.3
COL4A3BP-203ENST00000380494 GDF5OSQ5U4N7 250 aa13.18□□□□□ -0.3
COL4A3BP-203ENST00000380494 CLPSL2Q6UWE3 100 aa13.18□□□□□ -0.3
COL4A3BP-203ENST00000380494 PRAC2D3DTV9 90 aa13.17□□□□□ -0.3
COL4A3BP-203ENST00000380494 C5orf38Q86SI9 138 aa13.17□□□□□ -0.3
COL4A3BP-203ENST00000380494 KIAA2026Q5HYC2 2103 aa13.17□□□□□ -0.3
COL4A3BP-203ENST00000380494 COX7A2LO14548 114 aa13.17□□□□□ -0.3
COL4A3BP-203ENST00000380494 SPRY2O43597 315 aa13.17□□□□□ -0.3
COL4A3BP-203ENST00000380494 ATP5EP2Q5VTU8 51 aa13.17□□□□□ -0.3
COL4A3BP-203ENST00000380494 TPRP12270 2363 aaKnown RBP13.17□□□□□ -0.3
COL4A3BP-203ENST00000380494 NFE4Q86UQ8 179 aa13.17□□□□□ -0.3
COL4A3BP-203ENST00000380494 DOCK9Q9BZ29 2069 aa13.17□□□□□ -0.3
COL4A3BP-203ENST00000380494 P0DMU3 169 aa13.16□□□□□ -0.3
COL4A3BP-203ENST00000380494 FAM231AP0DMU4 169 aa13.16□□□□□ -0.3
COL4A3BP-203ENST00000380494 FAM231CP0DMU5 169 aa13.16□□□□□ -0.3
COL4A3BP-203ENST00000380494 C20orf203Q8NBC4 194 aa13.16□□□□□ -0.3
COL4A3BP-203ENST00000380494 MGAMO43451 1857 aa13.16□□□□□ -0.3
COL4A3BP-203ENST00000380494 DAND5Q8N907 189 aa13.16□□□□□ -0.3
COL4A3BP-203ENST00000380494 MBD6Q96DN6 1003 aa13.16□□□□□ -0.3
COL4A3BP-203ENST00000380494 LOXL1Q08397 574 aaPredicted RBP13.16□□□□□ -0.3
COL4A3BP-203ENST00000380494 PKIGQ9Y2B9 76 aa13.16□□□□□ -0.3
COL4A3BP-203ENST00000380494 SPRNQ5BIV9 151 aa13.15□□□□□ -0.3
COL4A3BP-203ENST00000380494 C3orf56Q8N813 242 aa13.15□□□□□ -0.3
COL4A3BP-203ENST00000380494 DEFB105AQ8NG35 78 aa13.15□□□□□ -0.3
COL4A3BP-203ENST00000380494 IGHV3-30-3P0DP02 117 aa13.15□□□□□ -0.3
COL4A3BP-203ENST00000380494 K7EMT4 169 aa13.15□□□□□ -0.3
COL4A3BP-203ENST00000380494 FRMPD3Q5JV73 1810 aa13.15□□□□□ -0.3
COL4A3BP-203ENST00000380494 TANC1Q9C0D5 1861 aa13.15□□□□□ -0.3
COL4A3BP-203ENST00000380494 BRK1Q8WUW1 75 aa13.15□□□□□ -0.31
COL4A3BP-203ENST00000380494 TP53TG3Q9ULZ0 132 aa13.14□□□□□ -0.31
COL4A3BP-203ENST00000380494 SVILO95425 2214 aa13.14□□□□□ -0.31
COL4A3BP-203ENST00000380494 MLST8Q9BVC4 326 aa13.14□□□□□ -0.31
COL4A3BP-203ENST00000380494 TRBV7-3A0A075B6L6 115 aa13.14□□□□□ -0.31
COL4A3BP-203ENST00000380494 NEXN-AS1Q8NBZ9 246 aa13.14□□□□□ -0.31
COL4A3BP-203ENST00000380494 YLPM1P49750 1951 aaKnown RBP13.14□□□□□ -0.31
COL4A3BP-203ENST00000380494 TICRRQ7Z2Z1 1910 aa13.14□□□□□ -0.31
COL4A3BP-203ENST00000380494 ETDCA0A1B0GVM5 59 aa13.14□□□□□ -0.31
COL4A3BP-203ENST00000380494 NDUFS5O43920 106 aa13.14□□□□□ -0.31
COL4A3BP-203ENST00000380494 RP1L1Q8IWN7 2480 aaPredicted RBP13.14□□□□□ -0.31
COL4A3BP-203ENST00000380494 SDK2Q58EX2 2172 aa13.13□□□□□ -0.31
COL4A3BP-203ENST00000380494 IGKV1D-37A0A075B6S9 117 aa13.13□□□□□ -0.31
COL4A3BP-203ENST00000380494 A0A0J9YXY3 114 aa13.13□□□□□ -0.31
COL4A3BP-203ENST00000380494 K7ENP7 123 aa13.13□□□□□ -0.31
COL4A3BP-203ENST00000380494 U3KQK5 164 aa13.13□□□□□ -0.31
COL4A3BP-203ENST00000380494 RNF223E7ERA6 249 aa13.13□□□□□ -0.31
COL4A3BP-203ENST00000380494 IGLC6P0CF74 106 aa13.13□□□□□ -0.31
COL4A3BP-203ENST00000380494 FAM236DA0A1B0GTK5 79 aa13.12□□□□□ -0.31
COL4A3BP-203ENST00000380494 FAM236CP0DP71 79 aa13.12□□□□□ -0.31
COL4A3BP-203ENST00000380494 PLXNB3Q9ULL4 1909 aa13.12□□□□□ -0.31
COL4A3BP-203ENST00000380494 A0A096LPF7 62 aa13.12□□□□□ -0.31
COL4A3BP-203ENST00000380494 HIST2H2BDQ6DRA6 164 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms